Overview
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of opsin-like vs. uniprot
Match: gi|129211|sp|P09241|OPSD_ENTDO (RecName: Full=Rhodopsin [Enteroctopus dofleini]) HSP 1 Score: 230.335 bits (586), Expect = 2.646e-67 Identity = 119/261 (45.59%), Postives = 180/261 (68.97%), Query Frame = 1 Query: 799 MMYSNSTVNSTVTIAPWHWDHEFEAIVHPYWRQFDIVPEFYHYMVGVYISIVGISGVLGNLLVLYIFASTKSLRTAPNLFVMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXXNTMALISLDRFFVIAQPFQTMRALSMKKAIIMLVGVWIYSFIWASPPFWGYGNYVPEGFQTSCTFDYLTQSKGNIIFNIGMYICNFVFPVGIIIFCYYQIVKSVRLHELEMLKMAQKMNATNPTSMKTGA 1581 M+ S + VN T W + +HP+W +FD +P+ +Y VG++I +VGI G+LGN +V+Y+F+ TKSL+T N+F+++LA+ DL+FSA+NGFPL TIS+F +W +GK+ C++YG +GG+FGF+SINTMA+IS+DR+ VI +P + +S ++A +M++ VW++S +W+ P + +G YVPEG TSC+FDYL+ F + MY C F+ P+ II FCY+ IV SV HE EM MA+++NA + GA Sbjct: 1 MVESTTLVNQT-------WWYNPTVDIHPHWAKFDPIPDAVYYSVGIFIGVVGIIGILGNGVVIYLFSKTKSLQTPANMFIINLAMSDLSFSAINGFPLKTISAFMKKWIFGKVACQLYGLLGGIFGFMSINTMAMISIDRYNVIGRPMAASKKMSHRRAFLMIIFVWMWSIVWSVGPVFNWGAYVPEGILTSCSFDYLSTDPSTRSFILCMYFCGFMLPIIIIAFCYFNIVMSVSNHEKEMAAMAKRLNAKELRKAQAGA 254 HSP 2 Score: 230.335 bits (586), Expect = 2.646e-67 Identity = 119/261 (45.59%), Postives = 180/261 (68.97%), Query Frame = -1 Query: 18 MMYSNSTVNSTVTIAPWHWDHEFEAIVHPYWRQFDIVPEFYHYMVGVYISIVGISGVLGNLLVLYIFASTKSLRTAPNLFVMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXINTMALISLDRFFVIAQPFQTMRALSMKKAIIMLVGVWIYSFIWASPPFWGYGNYVPEGFQTSCTFDYLTQSKGNIIFNIGMYICNFVFPVGIIIFCYYQIVKSVRLHELEMLKMAQKMNATNPTSMKTGA 800 M+ S + VN T W + +HP+W +FD +P+ +Y VG++I +VGI G+LGN +V+Y+F+ TKSL+T N+F+++LA+ DL+FSA+NGFPL TIS+F +W +GK+ C++YG +GG+FGF+SINTMA+IS+DR+ VI +P + +S ++A +M++ VW++S +W+ P + +G YVPEG TSC+FDYL+ F + MY C F+ P+ II FCY+ IV SV HE EM MA+++NA + GA Sbjct: 1 MVESTTLVNQT-------WWYNPTVDIHPHWAKFDPIPDAVYYSVGIFIGVVGIIGILGNGVVIYLFSKTKSLQTPANMFIINLAMSDLSFSAINGFPLKTISAFMKKWIFGKVACQLYGLLGGIFGFMSINTMAMISIDRYNVIGRPMAASKKMSHRRAFLMIIFVWMWSIVWSVGPVFNWGAYVPEGILTSCSFDYLSTDPSTRSFILCMYFCGFMLPIIIIAFCYFNIVMSVSNHEKEMAAMAKRLNAKELRKAQAGA 254
BLAST of opsin-like vs. uniprot
Match: gi|3024254|sp|O15973|OPSD1_MIZYE (RecName: Full=Rhodopsin, GQ-coupled; AltName: Full=GQ-rhodopsin [Mizuhopecten yessoensis]) HSP 1 Score: 228.794 bits (582), Expect = 2.769e-66 Identity = 119/258 (46.12%), Postives = 182/258 (70.54%), Query Frame = 1 Query: 811 NSTVNSTVTIAPWHWDHEFEAIVHPYWRQFDIVPEFYHYMVGVYISIVGISGVLGNLLVLYIFASTKSLRTAPNLFVMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXXNTMALISLDRFFVIAQPFQTMRALSMKKAIIMLVGVWIYSFIWASPPFWGYGNYVPEGFQTSCTFDYLTQSKGNIIFNIGMYICNFVFPVGIIIFCYYQIVKSVRLHELEMLKMAQKMNATNPTSMKTGAK 1584 N T+N ++T W+ ++ VH +W QF V E +HY++GVYI+IVG+ G++GN V+YIF++TKSLR+ NLFV++LA+ DL FSAVNGFPLLT+SSF+ +W +G L C++YGF+GG+FG +SINT+ IS+DR+ VI +P Q + ++ +K +M+V VW+ S + + PPF+G+G Y+PEGFQTSCTFDYLT++ + + +Y+ F+ P+ II CY I++ VR H+ +ML + + M + + A+ Sbjct: 15 NGTLNRSMT-PNTGWEGPYDMSVHLHWTQFPPVTEEWHYIIGVYITIVGLLGIMGNTTVVYIFSNTKSLRSPSNLFVVNLAVSDLIFSAVNGFPLLTVSSFHQKWIFGSLFCQLYGFVGGVFGLMSINTLTAISIDRYVVITKPLQASQTMTRRKVHLMIVIVWVLSILLSIPPFFGWGAYIPEGFQTSCTFDYLTKTARTRTYIVVLYLFGFLIPLIIIGVCYVLIIRGVRRHDQKMLTITRSMKTEDARANNKRAR 271 HSP 2 Score: 228.794 bits (582), Expect = 2.769e-66 Identity = 119/258 (46.12%), Postives = 182/258 (70.54%), Query Frame = -1 Query: 15 NSTVNSTVTIAPWHWDHEFEAIVHPYWRQFDIVPEFYHYMVGVYISIVGISGVLGNLLVLYIFASTKSLRTAPNLFVMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXINTMALISLDRFFVIAQPFQTMRALSMKKAIIMLVGVWIYSFIWASPPFWGYGNYVPEGFQTSCTFDYLTQSKGNIIFNIGMYICNFVFPVGIIIFCYYQIVKSVRLHELEMLKMAQKMNATNPTSMKTGAK 788 N T+N ++T W+ ++ VH +W QF V E +HY++GVYI+IVG+ G++GN V+YIF++TKSLR+ NLFV++LA+ DL FSAVNGFPLLT+SSF+ +W +G L C++YGF+GG+FG +SINT+ IS+DR+ VI +P Q + ++ +K +M+V VW+ S + + PPF+G+G Y+PEGFQTSCTFDYLT++ + + +Y+ F+ P+ II CY I++ VR H+ +ML + + M + + A+ Sbjct: 15 NGTLNRSMT-PNTGWEGPYDMSVHLHWTQFPPVTEEWHYIIGVYITIVGLLGIMGNTTVVYIFSNTKSLRSPSNLFVVNLAVSDLIFSAVNGFPLLTVSSFHQKWIFGSLFCQLYGFVGGVFGLMSINTLTAISIDRYVVITKPLQASQTMTRRKVHLMIVIVWVLSILLSIPPFFGWGAYIPEGFQTSCTFDYLTKTARTRTYIVVLYLFGFLIPLIIIGVCYVLIIRGVRRHDQKMLTITRSMKTEDARANNKRAR 271
BLAST of opsin-like vs. uniprot
Match: gi|2499376|sp|Q17094|OPSD_ALLSU (RecName: Full=Rhodopsin, partial [Alloteuthis subulata]) HSP 1 Score: 206.453 bits (524), Expect = 1.802e-58 Identity = 110/235 (46.81%), Postives = 157/235 (66.81%), Query Frame = 1 Query: 877 VHPYWRQFDIVPEFYHYMVGVYISIVGISGVLGNLLVLYIFASTKSLRTAPNLFVMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXXNTMALISLDRFFVIAQPFQTMRALSMKKAIIMLVGVWIYSFIWASPPFWGYGNYVPEGFQTSCTFDYLTQSKGNIIFNIGMYICNFVFPVGIIIFCYYQIVKSVRLHELEMLKMAQKMNATNPTSMKTGA 1581 +H +W+QFD VP +Y +G++I+I GI G GN +V+Y+F TKSL+T N+F+++LA D TFS VNGFP++TIS F W +G+ C++YG IGG+FG SI TM +IS+DR+ VI +P + +S +KA IM+V VWI+S IWA P +G+G Y EG +C+FDY+T+ + MYI F+FP+ +I FCY+ IV SV HE EM MA+++NA + GA Sbjct: 12 IHSHWKQFDQVPAAVYYSLGIFIAICGIIGCAGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPMMTISCFLKHWVFGQAACKVYGLIGGIFGLTSIMTMTMISIDRYNVIRRPMSASKKMSHRKAFIMIVFVWIWSTIWAIGPIFGWGAYQLEGVLCNCSFDYITRDASTRSNIVCMYIFAFMFPIVVIFFCYFNIVMSVSNHEKEMAAMAKRLNAKELRKAQAGA 246 HSP 2 Score: 206.453 bits (524), Expect = 1.802e-58 Identity = 110/235 (46.81%), Postives = 157/235 (66.81%), Query Frame = -1 Query: 18 VHPYWRQFDIVPEFYHYMVGVYISIVGISGVLGNLLVLYIFASTKSLRTAPNLFVMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXINTMALISLDRFFVIAQPFQTMRALSMKKAIIMLVGVWIYSFIWASPPFWGYGNYVPEGFQTSCTFDYLTQSKGNIIFNIGMYICNFVFPVGIIIFCYYQIVKSVRLHELEMLKMAQKMNATNPTSMKTGA 722 +H +W+QFD VP +Y +G++I+I GI G GN +V+Y+F TKSL+T N+F+++LA D TFS VNGFP++TIS F W +G+ C++YG IGG+FG SI TM +IS+DR+ VI +P + +S +KA IM+V VWI+S IWA P +G+G Y EG +C+FDY+T+ + MYI F+FP+ +I FCY+ IV SV HE EM MA+++NA + GA Sbjct: 12 IHSHWKQFDQVPAAVYYSLGIFIAICGIIGCAGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPMMTISCFLKHWVFGQAACKVYGLIGGIFGLTSIMTMTMISIDRYNVIRRPMSASKKMSHRKAFIMIVFVWIWSTIWAIGPIFGWGAYQLEGVLCNCSFDYITRDASTRSNIVCMYIFAFMFPIVVIFFCYFNIVMSVSNHEKEMAAMAKRLNAKELRKAQAGA 246
BLAST of opsin-like vs. uniprot
Match: gi|129209|sp|P24603|OPSD_LOLFO (RecName: Full=Rhodopsin [Loligo forbesii]) HSP 1 Score: 206.068 bits (523), Expect = 3.442e-58 Identity = 110/236 (46.61%), Postives = 158/236 (66.95%), Query Frame = 1 Query: 877 VHPYWRQFDIVPEFYHYMVGVYISIVGISGVLGNLLVLYIFASTKSLRTAPNLFVMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXXNTMALISLDRFFVIAQPFQTMRALSMKKAIIMLVGVWIYSFIWASPPFWGYGNYVPEGFQTSCTFDYLTQSKGNIIFNIGMYICNFVFPVGIIIFCYYQIVKSVRLHELEMLKMAQKMNATNPTSMKTGAK 1584 +HP+W+QFD VP +Y +G++I+I GI G +GN +V+Y+F TKSL+T N+F+++LA D TFS VNGFPL+TIS F W +G C++YG IGG+FG +SI TM +IS+DR+ VI +P + +S +KA IM++ VWI+S IWA P +G+G Y EG +C+FDY+T+ + MYI F+ P+ +I FCY+ IV SV HE EM MA+++NA + GA Sbjct: 19 IHPHWKQFDQVPAAVYYSLGIFIAICGIIGCVGNGVVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFMKYWVFGNAACKVYGLIGGIFGLMSIMTMTMISIDRYNVIGRPMSASKKMSHRKAFIMIIFVWIWSTIWAIGPIFGWGAYTLEGVLCNCSFDYITRDTTTRSNILCMYIFAFMCPIVVIFFCYFNIVMSVSNHEKEMAAMAKRLNAKELRKAQAGAN 254 HSP 2 Score: 206.068 bits (523), Expect = 3.442e-58 Identity = 110/236 (46.61%), Postives = 158/236 (66.95%), Query Frame = -1 Query: 15 VHPYWRQFDIVPEFYHYMVGVYISIVGISGVLGNLLVLYIFASTKSLRTAPNLFVMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXINTMALISLDRFFVIAQPFQTMRALSMKKAIIMLVGVWIYSFIWASPPFWGYGNYVPEGFQTSCTFDYLTQSKGNIIFNIGMYICNFVFPVGIIIFCYYQIVKSVRLHELEMLKMAQKMNATNPTSMKTGAK 722 +HP+W+QFD VP +Y +G++I+I GI G +GN +V+Y+F TKSL+T N+F+++LA D TFS VNGFPL+TIS F W +G C++YG IGG+FG +SI TM +IS+DR+ VI +P + +S +KA IM++ VWI+S IWA P +G+G Y EG +C+FDY+T+ + MYI F+ P+ +I FCY+ IV SV HE EM MA+++NA + GA Sbjct: 19 IHPHWKQFDQVPAAVYYSLGIFIAICGIIGCVGNGVVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFMKYWVFGNAACKVYGLIGGIFGLMSIMTMTMISIDRYNVIGRPMSASKKMSHRKAFIMIIFVWIWSTIWAIGPIFGWGAYTLEGVLCNCSFDYITRDTTTRSNILCMYIFAFMCPIVVIFFCYFNIVMSVSNHEKEMAAMAKRLNAKELRKAQAGAN 254
BLAST of opsin-like vs. uniprot
Match: gi|3024292|sp|O16005|OPSD_SEPOF (RecName: Full=Rhodopsin [Sepia officinalis]) HSP 1 Score: 186.037 bits (471), Expect = 8.139e-51 Identity = 108/235 (45.96%), Postives = 161/235 (68.51%), Query Frame = 1 Query: 877 VHPYWRQFDIVPEFYHYMVGVYISIVGISGVLGNLLVLYIFASTKSLRTAPNLFVMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXXNTMALISLDRFFVIAQPFQTMRALSMKKAIIMLVGVWIYSFIWASPPFWGYGNYVPEGFQTSCTFDYLTQSKGNIIFNIGMYICNFVFPVGIIIFCYYQIVKSVRLHELEMLKMAQKMNATNPTSMKTGA 1581 VHP+W+QF+ VP+ +Y +G++I I GI G GN +V+Y+F TKSL+T N+F+++LA D TFS VNGFPL+TIS F +W +G C++YGFIGG+FG +SI TM++IS+DR+ VI +P + +S ++A +M++ VW++S +W+ P +G+G YV EG +C+FDY+T+ + MYI F FP+ II FCY+ IV +V HE EM MA+++NA + GA Sbjct: 19 VHPHWKQFNQVPDAVYYSLGIFIGICGIIGCTGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFIKKWVFGMAACKVYGFIGGIFGLMSIMTMSMISIDRYNVIGRPMAASKKMSHRRAFLMIIFVWMWSTLWSIGPIFGWGAYVLEGVLCNCSFDYITRDSATRSNIVCMYIFAFCFPILIIFFCYFNIVMAVSNHEKEMAAMAKRLNAKELRKAQAGA 253 HSP 2 Score: 186.037 bits (471), Expect = 8.139e-51 Identity = 108/235 (45.96%), Postives = 161/235 (68.51%), Query Frame = -1 Query: 18 VHPYWRQFDIVPEFYHYMVGVYISIVGISGVLGNLLVLYIFASTKSLRTAPNLFVMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXINTMALISLDRFFVIAQPFQTMRALSMKKAIIMLVGVWIYSFIWASPPFWGYGNYVPEGFQTSCTFDYLTQSKGNIIFNIGMYICNFVFPVGIIIFCYYQIVKSVRLHELEMLKMAQKMNATNPTSMKTGA 722 VHP+W+QF+ VP+ +Y +G++I I GI G GN +V+Y+F TKSL+T N+F+++LA D TFS VNGFPL+TIS F +W +G C++YGFIGG+FG +SI TM++IS+DR+ VI +P + +S ++A +M++ VW++S +W+ P +G+G YV EG +C+FDY+T+ + MYI F FP+ II FCY+ IV +V HE EM MA+++NA + GA Sbjct: 19 VHPHWKQFNQVPDAVYYSLGIFIGICGIIGCTGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFIKKWVFGMAACKVYGFIGGIFGLMSIMTMSMISIDRYNVIGRPMAASKKMSHRRAFLMIIFVWMWSTLWSIGPIFGWGAYVLEGVLCNCSFDYITRDSATRSNIVCMYIFAFCFPILIIFFCYFNIVMAVSNHEKEMAAMAKRLNAKELRKAQAGA 253
BLAST of opsin-like vs. Smed Unigenes AA
Match: SMU15026624 (SmedSxldir_c84693_g1_i1|m.24953|m.19106) HSP 1 Score: 443.351 bits (1139), Expect = 7.240e-151 Identity = 222/258 (86.05%), Postives = 246/258 (95.35%), Query Frame = 1 Query: 823 NSTVTIAPWHWDHEFEAIVHPYWRQFDIVPEFYHYMVGVYISIVGISGVLGNLLVLYIFASTKSLRTAPNLFVMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXXNTMALISLDRFFVIAQPFQTMRALSMKKAIIMLVGVWIYSFIWASPPFWGYGNYVPEGFQTSCTFDYLTQSKGNIIFNIGMYICNFVFPVGIIIFCYYQIVKSVRLHELEMLKMAQKMNATNPTSMKTGAKKADI 1596 N ++T + WHWD EFE+IVHPYWR FD+VPE YHY+VGVYISIVGISGVLGNLLVLYIFAS KSLRT PN+F+MSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEIYGFIGGLFGFISINTMALISLDR+FVIAQPFQTM++L++K+AIIMLV VW+YS IW++PPF+GYGNYVPEGFQTSCTFDYLTQSKGNIIFNIGMYI NF+ PVGIIIFCYYQIVK+VR+HELEMLKMAQKMNA++PTSMKTGAKKAD+ Sbjct: 33 NESLTKSVWHWDPEFESIVHPYWRTFDMVPEVYHYLVGVYISIVGISGVLGNLLVLYIFASAKSLRTPPNMFIMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEIYGFIGGLFGFISINTMALISLDRYFVIAQPFQTMKSLTIKRAIIMLVFVWLYSLIWSTPPFFGYGNYVPEGFQTSCTFDYLTQSKGNIIFNIGMYIGNFIIPVGIIIFCYYQIVKAVRVHELEMLKMAQKMNASHPTSMKTGAKKADV 290 HSP 2 Score: 443.351 bits (1139), Expect = 7.240e-151 Identity = 222/258 (86.05%), Postives = 246/258 (95.35%), Query Frame = -1 Query: 3 NSTVTIAPWHWDHEFEAIVHPYWRQFDIVPEFYHYMVGVYISIVGISGVLGNLLVLYIFASTKSLRTAPNLFVMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXINTMALISLDRFFVIAQPFQTMRALSMKKAIIMLVGVWIYSFIWASPPFWGYGNYVPEGFQTSCTFDYLTQSKGNIIFNIGMYICNFVFPVGIIIFCYYQIVKSVRLHELEMLKMAQKMNATNPTSMKTGAKKADI 776 N ++T + WHWD EFE+IVHPYWR FD+VPE YHY+VGVYISIVGISGVLGNLLVLYIFAS KSLRT PN+F+MSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEIYGFIGGLFGFISINTMALISLDR+FVIAQPFQTM++L++K+AIIMLV VW+YS IW++PPF+GYGNYVPEGFQTSCTFDYLTQSKGNIIFNIGMYI NF+ PVGIIIFCYYQIVK+VR+HELEMLKMAQKMNA++PTSMKTGAKKAD+ Sbjct: 33 NESLTKSVWHWDPEFESIVHPYWRTFDMVPEVYHYLVGVYISIVGISGVLGNLLVLYIFASAKSLRTPPNMFIMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEIYGFIGGLFGFISINTMALISLDRYFVIAQPFQTMKSLTIKRAIIMLVFVWLYSLIWSTPPFFGYGNYVPEGFQTSCTFDYLTQSKGNIIFNIGMYIGNFIIPVGIIIFCYYQIVKAVRVHELEMLKMAQKMNASHPTSMKTGAKKADV 290
BLAST of opsin-like vs. Smed Unigenes AA
Match: SMU15028515 (SmedSxldir_c96785_g1_i5|m.39594|m.45818) HSP 1 Score: 111.694 bits (278), Expect = 1.490e-26 Identity = 69/214 (32.24%), Postives = 118/214 (55.14%), Query Frame = 1 Query: 910 PEFY-HYMVGVYISIVGISGVLGNLLVLYIFASTKSLRTAPNLFVMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXXNTMALISLDRFFVIAQPFQTMRALSMKKAIIMLVGVWIYSFIWASPPFWGYGNYVPEGFQTSCTFDYLT---QSKGNIIFNIGMYICNFVFPVGIIIFCYYQIVKSVRLHELEMLKMAQ 1539 PE Y +Y + YI ++GI G N+LV+ +F +KS+ T N+F+ LA+ DL + GFP LTIS F W + + C Y F + G SI + +++++R VI++P + ++ +S K++ ++++ W ++ + PP G+ YV EG SC++D +SK I+F IG+++ + IIIFCY + V+ M M + Sbjct: 19 PETYVYYALASYILVIGIIGTAENMLVMLVFIRSKSMWTPSNVFIFDLALSDLLI-CILGFPFLTISGFCKEWIFSEAGCSAYAFSMSVTGMHSIFILTILAVERLKVISRPLKMVKIVSKKRSFLLVLISWTFAIFVSIPPLLGWNRYVLEGLHISCSYDMFDGSWRSKSYIVFLIGIFLVVLL----IIIFCYLALFLKVQRQATSMRVMIK 227 HSP 2 Score: 111.694 bits (278), Expect = 1.490e-26 Identity = 69/214 (32.24%), Postives = 118/214 (55.14%), Query Frame = -1 Query: 60 PEFY-HYMVGVYISIVGISGVLGNLLVLYIFASTKSLRTAPNLFVMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXINTMALISLDRFFVIAQPFQTMRALSMKKAIIMLVGVWIYSFIWASPPFWGYGNYVPEGFQTSCTFDYLT---QSKGNIIFNIGMYICNFVFPVGIIIFCYYQIVKSVRLHELEMLKMAQ 689 PE Y +Y + YI ++GI G N+LV+ +F +KS+ T N+F+ LA+ DL + GFP LTIS F W + + C Y F + G SI + +++++R VI++P + ++ +S K++ ++++ W ++ + PP G+ YV EG SC++D +SK I+F IG+++ + IIIFCY + V+ M M + Sbjct: 19 PETYVYYALASYILVIGIIGTAENMLVMLVFIRSKSMWTPSNVFIFDLALSDLLI-CILGFPFLTISGFCKEWIFSEAGCSAYAFSMSVTGMHSIFILTILAVERLKVISRPLKMVKIVSKKRSFLLVLISWTFAIFVSIPPLLGWNRYVLEGLHISCSYDMFDGSWRSKSYIVFLIGIFLVVLL----IIIFCYLALFLKVQRQATSMRVMIK 227
BLAST of opsin-like vs. Smed Unigenes AA
Match: SMU15032968 (SmedSxlregen_c81464_g11_i1|m.21191|m.10162) HSP 1 Score: 100.523 bits (249), Expect = 6.044e-23 Identity = 72/209 (34.45%), Postives = 108/209 (51.67%), Query Frame = 1 Query: 910 PEFYHYMV-GVYISIVGISGVLGNLLVLYIFASTKSLRTAPNLFVMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXXNTMALISLDRFFVIAQPFQTMRALSMKKAIIMLVGVWIYSFIWASPPFWGYGNYVPEGFQTSCTFDYLT---QSKGNIIFNIGMYICNFVFPVGIIIFCYYQIVKSVRLHELEM 1524 PE + Y + GVYI +G+ G + N V+ +F +K L T N+FV L D + GFP L +SSF W + C +Y F + G SI + +I+++RF + P QT++ +++K++I ++ W I + PP G+ YV EG Q SC+FD QSK I+ IG F+ + II CY +I VR EM Sbjct: 15 PEAFVYDIYGVYILFIGLFGCIENGCVILVFIRSKLLWTPSNIFVFDLVCSDFLICTI-GFPFLMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSYIMLLIG----TFLLILTAIIICYVKIFFKVRDQIKEM 218 HSP 2 Score: 100.523 bits (249), Expect = 6.044e-23 Identity = 72/209 (34.45%), Postives = 108/209 (51.67%), Query Frame = -1 Query: 75 PEFYHYMV-GVYISIVGISGVLGNLLVLYIFASTKSLRTAPNLFVMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXINTMALISLDRFFVIAQPFQTMRALSMKKAIIMLVGVWIYSFIWASPPFWGYGNYVPEGFQTSCTFDYLT---QSKGNIIFNIGMYICNFVFPVGIIIFCYYQIVKSVRLHELEM 689 PE + Y + GVYI +G+ G + N V+ +F +K L T N+FV L D + GFP L +SSF W + C +Y F + G SI + +I+++RF + P QT++ +++K++I ++ W I + PP G+ YV EG Q SC+FD QSK I+ IG F+ + II CY +I VR EM Sbjct: 15 PEAFVYDIYGVYILFIGLFGCIENGCVILVFIRSKLLWTPSNIFVFDLVCSDFLICTI-GFPFLMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSYIMLLIG----TFLLILTAIIICYVKIFFKVRDQIKEM 218
BLAST of opsin-like vs. Smed Unigenes AA
Match: SMU15030838 (SmedSxlregen_c54053_g1_i1|m.6668|m.37854) HSP 1 Score: 87.4261 bits (215), Expect = 1.067e-18 Identity = 59/197 (29.95%), Postives = 107/197 (54.31%), Query Frame = 1 Query: 919 YHYMVGVYISIVGISGVLGNLLVLYIFASTKSLRTAPNLFVMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXXNTMALISLDRFFVIAQPFQTMRALSMKKAIIM-LVGVWIYSFIWASPPFWGYGNYVPEGFQTSCTFDYLTQSKGNIIFNIGMYICNFVFPVGIIIFCYYQIVKSVR 1506 ++Y + IS I GVL N +++ F ++L++ NL +M++ I + A+ G P+ +SSF W + + C YGF G S+ M +I++DRFFVIA+P TM A K I + + G +YS I+ PP G+ Y + +TSC+ ++ ++ + I + + ++ P+ + ++CY+ I ++R Sbjct: 12 FYYSKAIVISFFLIFGVLLNGTIMFTFFHNRALKSPTNLLIMAIIINNFLL-AIFGIPMDIVSSFYQYWIFSDVGCRFYGFAMFFTGLNSVAIMTVIAIDRFFVIAKP--TMAAHITKNVIYLSICGCLVYSLIFTIPPLIGWNEYKLDKSKTSCSVNFESRDPIFYSYTIVILVFCYIIPIIVNLYCYFYIYMTIR 205 HSP 2 Score: 87.4261 bits (215), Expect = 1.067e-18 Identity = 59/197 (29.95%), Postives = 107/197 (54.31%), Query Frame = -1 Query: 93 YHYMVGVYISIVGISGVLGNLLVLYIFASTKSLRTAPNLFVMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXINTMALISLDRFFVIAQPFQTMRALSMKKAIIM-LVGVWIYSFIWASPPFWGYGNYVPEGFQTSCTFDYLTQSKGNIIFNIGMYICNFVFPVGIIIFCYYQIVKSVR 680 ++Y + IS I GVL N +++ F ++L++ NL +M++ I + A+ G P+ +SSF W + + C YGF G S+ M +I++DRFFVIA+P TM A K I + + G +YS I+ PP G+ Y + +TSC+ ++ ++ + I + + ++ P+ + ++CY+ I ++R Sbjct: 12 FYYSKAIVISFFLIFGVLLNGTIMFTFFHNRALKSPTNLLIMAIIINNFLL-AIFGIPMDIVSSFYQYWIFSDVGCRFYGFAMFFTGLNSVAIMTVIAIDRFFVIAKP--TMAAHITKNVIYLSICGCLVYSLIFTIPPLIGWNEYKLDKSKTSCSVNFESRDPIFYSYTIVILVFCYIIPIIVNLYCYFYIYMTIR 205
BLAST of opsin-like vs. Smed Unigenes AA
Match: SMU15010993 (SmedAsxldir_c46418_g1_i1|m.8227|m.22320) HSP 1 Score: 82.4185 bits (202), Expect = 8.101e-17 Identity = 72/234 (30.77%), Postives = 123/234 (52.56%), Query Frame = 1 Query: 928 MVGVYISIVGISGVLGNLLVLYIFASTKSLRTAPNLFVMSLAIGDLTFSAVNG-FPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXXNTMALISLDRFFVIAQPFQTMRALSMKKAIIMLVGVWIYSFIWASP--PFWGYGNY-VPEGFQTSCTFDYLT--QSKGNIIFNIGMYICNFVFPVGIIIFCY---YQIVKSVRLHELEMLKMAQKMNATNPTSMK--TGAKKADI 1596 +V YI+++ I G LG+ LV+Y+ +K+LRT N+F+++LAI DL A + F ++ + SF+ W +G+ C++ G G +S ++ I+LDR+ VI P T +L + AI +++G+WI S I ASP F G + + T CT + K + ++I + +V P+ I+ Y Y+I+K R++ L + + N M+ T +K DI Sbjct: 61 LVLSYIAMIVI-GTLGSSLVIYVVLRSKTLRTPRNMFILNLAITDLILCAFSQPFNIIRLLSFHKEWIFGEWVCKLVGLFTGTNVCVSTISITAIALDRYQVILCP--TRNSLQLIGAIKVMLGIWILSLIIASPLVLFSGVETVNMLKANHTRCTEHTVEIYMRKLKVGYSIATLVLLYVIPLSIVTITYMKIYRIIKQ-RMNNLHKKDLESSNSLPNSHKMELLTDKQKYDI 290 HSP 2 Score: 82.4185 bits (202), Expect = 8.101e-17 Identity = 72/234 (30.77%), Postives = 123/234 (52.56%), Query Frame = -1 Query: 3 MVGVYISIVGISGVLGNLLVLYIFASTKSLRTAPNLFVMSLAIGDLTFSAVNG-FPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXINTMALISLDRFFVIAQPFQTMRALSMKKAIIMLVGVWIYSFIWASP--PFWGYGNY-VPEGFQTSCTFDYLT--QSKGNIIFNIGMYICNFVFPVGIIIFCY---YQIVKSVRLHELEMLKMAQKMNATNPTSMK--TGAKKADI 671 +V YI+++ I G LG+ LV+Y+ +K+LRT N+F+++LAI DL A + F ++ + SF+ W +G+ C++ G G +S ++ I+LDR+ VI P T +L + AI +++G+WI S I ASP F G + + T CT + K + ++I + +V P+ I+ Y Y+I+K R++ L + + N M+ T +K DI Sbjct: 61 LVLSYIAMIVI-GTLGSSLVIYVVLRSKTLRTPRNMFILNLAITDLILCAFSQPFNIIRLLSFHKEWIFGEWVCKLVGLFTGTNVCVSTISITAIALDRYQVILCP--TRNSLQLIGAIKVMLGIWILSLIIASPLVLFSGVETVNMLKANHTRCTEHTVEIYMRKLKVGYSIATLVLLYVIPLSIVTITYMKIYRIIKQ-RMNNLHKKDLESSNSLPNSHKMELLTDKQKYDI 290
BLAST of opsin-like vs. RefSeq Human
Match: gi|15150803|ref|NP_150598.1| (melanopsin isoform 1 [Homo sapiens]) HSP 1 Score: 137.887 bits (346), Expect = 1.749e-34 Identity = 76/183 (41.53%), Postives = 115/183 (62.84%), Query Frame = 1 Query: 907 VPEFYHYMVGVYISIVGISGVLGNLLVLYIFASTKSLRTAPNLFVMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXXNTMALISLDRFFVIAQPFQTMRALSMKKAIIMLVGVWIYSFIWASPPFWGYGNYVPEGFQTSCTFDYLTQSKGNIIFNIGMYICNFVF 1455 VP+ HY +G I +VG++G+LGNL V+Y F ++SLRT N+F+++LA+ D S P+ SS +W +G+ CE Y F G LFG S+ T+ I+LDR+ VI +P T S ++A +L+GVW+Y+ W+ PPF+G+ YVPEG TSC++DY++ + + M +C FVF Sbjct: 65 VPDHAHYTLGTVILLVGLTGMLGNLTVIYTFCRSRSLRTPANMFIINLAVSDFLMSFTQA-PVFFTSSLYKQWLFGETGCEFYAFCGALFGISSMITLTAIALDRYLVITRPLATFGVASKRRAAFVLLGVWLYALAWSLPPFFGWSAYVPEGLLTSCSWDYMSFTPAVRAYT--MLLCCFVF 244 HSP 2 Score: 137.887 bits (346), Expect = 1.749e-34 Identity = 76/183 (41.53%), Postives = 115/183 (62.84%), Query Frame = -1 Query: 144 VPEFYHYMVGVYISIVGISGVLGNLLVLYIFASTKSLRTAPNLFVMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXINTMALISLDRFFVIAQPFQTMRALSMKKAIIMLVGVWIYSFIWASPPFWGYGNYVPEGFQTSCTFDYLTQSKGNIIFNIGMYICNFVF 692 VP+ HY +G I +VG++G+LGNL V+Y F ++SLRT N+F+++LA+ D S P+ SS +W +G+ CE Y F G LFG S+ T+ I+LDR+ VI +P T S ++A +L+GVW+Y+ W+ PPF+G+ YVPEG TSC++DY++ + + M +C FVF Sbjct: 65 VPDHAHYTLGTVILLVGLTGMLGNLTVIYTFCRSRSLRTPANMFIINLAVSDFLMSFTQA-PVFFTSSLYKQWLFGETGCEFYAFCGALFGISSMITLTAIALDRYLVITRPLATFGVASKRRAAFVLLGVWLYALAWSLPPFFGWSAYVPEGLLTSCSWDYMSFTPAVRAYT--MLLCCFVF 244
BLAST of opsin-like vs. RefSeq Human
Match: gi|71999143|ref|NP_001025186.1| (melanopsin isoform 2 [Homo sapiens]) HSP 1 Score: 129.413 bits (324), Expect = 1.264e-31 Identity = 76/194 (39.18%), Postives = 115/194 (59.28%), Query Frame = 1 Query: 907 VPEFYHYMVGVYISIVGISGVLGNLLVLYIFA-----------STKSLRTAPNLFVMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXXNTMALISLDRFFVIAQPFQTMRALSMKKAIIMLVGVWIYSFIWASPPFWGYGNYVPEGFQTSCTFDYLTQSKGNIIFNIGMYICNFVF 1455 VP+ HY +G I +VG++G+LGNL V+Y F ++SLRT N+F+++LA+ D S P+ SS +W +G+ CE Y F G LFG S+ T+ I+LDR+ VI +P T S ++A +L+GVW+Y+ W+ PPF+G+ YVPEG TSC++DY++ + + M +C FVF Sbjct: 65 VPDHAHYTLGTVILLVGLTGMLGNLTVIYTFCRAVLRGVTVMMQSRSLRTPANMFIINLAVSDFLMSFTQA-PVFFTSSLYKQWLFGETGCEFYAFCGALFGISSMITLTAIALDRYLVITRPLATFGVASKRRAAFVLLGVWLYALAWSLPPFFGWSAYVPEGLLTSCSWDYMSFTPAVRAYT--MLLCCFVF 255 HSP 2 Score: 129.413 bits (324), Expect = 1.264e-31 Identity = 76/194 (39.18%), Postives = 115/194 (59.28%), Query Frame = -1 Query: 144 VPEFYHYMVGVYISIVGISGVLGNLLVLYIFA-----------STKSLRTAPNLFVMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXINTMALISLDRFFVIAQPFQTMRALSMKKAIIMLVGVWIYSFIWASPPFWGYGNYVPEGFQTSCTFDYLTQSKGNIIFNIGMYICNFVF 692 VP+ HY +G I +VG++G+LGNL V+Y F ++SLRT N+F+++LA+ D S P+ SS +W +G+ CE Y F G LFG S+ T+ I+LDR+ VI +P T S ++A +L+GVW+Y+ W+ PPF+G+ YVPEG TSC++DY++ + + M +C FVF Sbjct: 65 VPDHAHYTLGTVILLVGLTGMLGNLTVIYTFCRAVLRGVTVMMQSRSLRTPANMFIINLAVSDFLMSFTQA-PVFFTSSLYKQWLFGETGCEFYAFCGALFGISSMITLTAIALDRYLVITRPLATFGVASKRRAAFVLLGVWLYALAWSLPPFFGWSAYVPEGLLTSCSWDYMSFTPAVRAYT--MLLCCFVF 255
BLAST of opsin-like vs. RefSeq Human
Match: gi|38678524|ref|NP_859528.1| (opsin-5 [Homo sapiens]) HSP 1 Score: 102.834 bits (255), Expect = 4.158e-23 Identity = 74/217 (34.10%), Postives = 111/217 (51.15%), Query Frame = 1 Query: 928 MVGVYISIVGISGVLGNLLVLYIFASTKSLRTAPNLFVMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXXNTMALISLDRFFVIAQPFQTMRALSMKKAIIMLVGVWIYSFIWASPPFWGYGNYVPEGFQTSCTFD-YLTQ-SKGNIIFNIGMYICNFVFPVGIIIFCYYQIVKSVRLHELEMLKMAQKMNATNPTSMK 1572 + G Y++I+GI GN VLY+ + K + ++LA+ DL S V G P IS F RW +G + C YG+ G FG S+ TM +SLDR+ I L K A I L +W Y+ W + P G G+YVPE F TSCT D +L Q S G +F + + + P +I+F Y +I+ V+ E+ ++++++ MK Sbjct: 35 VAGFYLTIIGILSTFGNGYVLYMSSRRKKKLRPAEIMTINLAVCDLGISVV-GKPFTIISCFCHRWVFGWIGCRWYGWAGFFFGCGSLITMTAVSLDRYLKICY-LSYGVWLKRKHAYICLAAIWAYASFWTTMPLVGLGDYVPEPFGTSCTLDWWLAQASVGGQVFILNILFFCLLLPTAVIVFSYVKIIAKVKSSSKEVAHFDSRIHSSHVLEMK 249 HSP 2 Score: 102.834 bits (255), Expect = 4.158e-23 Identity = 74/217 (34.10%), Postives = 111/217 (51.15%), Query Frame = -1 Query: 27 MVGVYISIVGISGVLGNLLVLYIFASTKSLRTAPNLFVMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXINTMALISLDRFFVIAQPFQTMRALSMKKAIIMLVGVWIYSFIWASPPFWGYGNYVPEGFQTSCTFD-YLTQ-SKGNIIFNIGMYICNFVFPVGIIIFCYYQIVKSVRLHELEMLKMAQKMNATNPTSMK 671 + G Y++I+GI GN VLY+ + K + ++LA+ DL S V G P IS F RW +G + C YG+ G FG S+ TM +SLDR+ I L K A I L +W Y+ W + P G G+YVPE F TSCT D +L Q S G +F + + + P +I+F Y +I+ V+ E+ ++++++ MK Sbjct: 35 VAGFYLTIIGILSTFGNGYVLYMSSRRKKKLRPAEIMTINLAVCDLGISVV-GKPFTIISCFCHRWVFGWIGCRWYGWAGFFFGCGSLITMTAVSLDRYLKICY-LSYGVWLKRKHAYICLAAIWAYASFWTTMPLVGLGDYVPEPFGTSCTLDWWLAQASVGGQVFILNILFFCLLLPTAVIVFSYVKIIAKVKSSSKEVAHFDSRIHSSHVLEMK 249
BLAST of opsin-like vs. RefSeq Human
Match: gi|5730019|ref|NP_006574.1| (visual pigment-like receptor peropsin [Homo sapiens]) HSP 1 Score: 100.138 bits (248), Expect = 3.346e-22 Identity = 54/197 (27.41%), Postives = 105/197 (53.30%), Query Frame = 1 Query: 922 HYMVGVYISIVGISGVLGNLLVLYIFASTKSLRTAPNLFVMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXXNTMALISLDRFFVIAQPFQTMRALSMKKAIIMLVGVWIYSFIWASPPFWGYGNYVPEGFQTSCTFDYLTQSKGNIIFNIGMYICNFVFPVGIIIFCYYQIVKSVRLH 1512 H +V Y+ + G+ ++ N++VL IF K LRT N +++LA+ D+ S++ G+P+ S W +G C++Y + FG SI + ++++DR+ I P R ++ I +++G WI WA P G+ +Y P+ +CT ++ + + + + + NF+ P+ ++ +CYY + S++ H Sbjct: 25 HNIVATYLIMAGMISIISNIIVLGIFIKYKELRTPTNAIIINLAVTDIGVSSI-GYPMSAASDLYGSWKFGYAGCQVYAGLNIFFGMASIGLLTVVAVDRYLTICLP-DVGRRMTTNTYIGLILGAWINGLFWALMPIIGWASYAPDPTGATCTINWRKNDRSFVSYTMTVIAINFIVPLTVMFYCYYHVTLSIKHH 219 HSP 2 Score: 100.138 bits (248), Expect = 3.346e-22 Identity = 54/197 (27.41%), Postives = 105/197 (53.30%), Query Frame = -1 Query: 87 HYMVGVYISIVGISGVLGNLLVLYIFASTKSLRTAPNLFVMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXINTMALISLDRFFVIAQPFQTMRALSMKKAIIMLVGVWIYSFIWASPPFWGYGNYVPEGFQTSCTFDYLTQSKGNIIFNIGMYICNFVFPVGIIIFCYYQIVKSVRLH 677 H +V Y+ + G+ ++ N++VL IF K LRT N +++LA+ D+ S++ G+P+ S W +G C++Y + FG SI + ++++DR+ I P R ++ I +++G WI WA P G+ +Y P+ +CT ++ + + + + + NF+ P+ ++ +CYY + S++ H Sbjct: 25 HNIVATYLIMAGMISIISNIIVLGIFIKYKELRTPTNAIIINLAVTDIGVSSI-GYPMSAASDLYGSWKFGYAGCQVYAGLNIFFGMASIGLLTVVAVDRYLTICLP-DVGRRMTTNTYIGLILGAWINGLFWALMPIIGWASYAPDPTGATCTINWRKNDRSFVSYTMTVIAINFIVPLTVMFYCYYHVTLSIKHH 219
BLAST of opsin-like vs. RefSeq Human
Match: gi|767939388|ref|XP_011512653.1| (PREDICTED: opsin-5 isoform X4 [Homo sapiens]) HSP 1 Score: 92.8189 bits (229), Expect = 8.218e-20 Identity = 70/207 (33.82%), Postives = 103/207 (49.76%), Query Frame = 1 Query: 958 ISGVLGNLLVLYIFASTKSLRTAPNLFVMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXXNTMALISLDRFFVIAQPFQTMRALSMKKAIIMLVGVWIYSFIWASPPFWGYGNYVPEGFQTSCTFD-YLTQ-SKGNIIFNIGMYICNFVFPVGIIIFCYYQIVKSVRLHELEMLKMAQKMNATNPTSMK 1572 I GN VLY+ + K + ++LA+ DL S V G P IS F RW +G + C YG+ G FG S+ TM +SLDR+ I L K A I L +W Y+ W + P G G+YVPE F TSCT D +L Q S G +F + + + P +I+F Y +I+ V+ E+ ++++++ MK Sbjct: 7 ILSTFGNGYVLYMSSRRKKKLRPAEIMTINLAVCDLGISVV-GKPFTIISCFCHRWVFGWIGCRWYGWAGFFFGCGSLITMTAVSLDRYLKICY-LSYGVWLKRKHAYICLAAIWAYASFWTTMPLVGLGDYVPEPFGTSCTLDWWLAQASVGGQVFILNILFFCLLLPTAVIVFSYVKIIAKVKSSSKEVAHFDSRIHSSHVLEMK 211 HSP 2 Score: 92.8189 bits (229), Expect = 8.218e-20 Identity = 70/207 (33.82%), Postives = 103/207 (49.76%), Query Frame = -1 Query: 27 ISGVLGNLLVLYIFASTKSLRTAPNLFVMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXINTMALISLDRFFVIAQPFQTMRALSMKKAIIMLVGVWIYSFIWASPPFWGYGNYVPEGFQTSCTFD-YLTQ-SKGNIIFNIGMYICNFVFPVGIIIFCYYQIVKSVRLHELEMLKMAQKMNATNPTSMK 641 I GN VLY+ + K + ++LA+ DL S V G P IS F RW +G + C YG+ G FG S+ TM +SLDR+ I L K A I L +W Y+ W + P G G+YVPE F TSCT D +L Q S G +F + + + P +I+F Y +I+ V+ E+ ++++++ MK Sbjct: 7 ILSTFGNGYVLYMSSRRKKKLRPAEIMTINLAVCDLGISVV-GKPFTIISCFCHRWVFGWIGCRWYGWAGFFFGCGSLITMTAVSLDRYLKICY-LSYGVWLKRKHAYICLAAIWAYASFWTTMPLVGLGDYVPEPFGTSCTLDWWLAQASVGGQVFILNILFFCLLLPTAVIVFSYVKIIAKVKSSSKEVAHFDSRIHSSHVLEMK 211
BLAST of opsin-like vs. RefSeq Drosophila melanogaster
Match: gi|17738051|ref|NP_524407.1| (neither inactivation nor afterpotential E [Drosophila melanogaster]) HSP 1 Score: 127.487 bits (319), Expect = 4.846e-32 Identity = 89/262 (33.97%), Postives = 139/262 (53.05%), Query Frame = 1 Query: 808 SNSTVNSTVTIAPWHWDHEFEAIVHPYWRQFDIVPEFYHYMVGVYISIVGISGVLGNLLVLYIFASTKSLRTAPNLFVMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXXNTMALISLDRFFVIAQPFQTMRALSMKKAIIMLVGVWIYSFIWASPPFWGYGNYVPEGFQTSCTFDYLTQSKGNIIFNIGMYICNFVFPVGIIIFCYYQIVKSVRLHELEMLKMAQKMNATNPTSMKTGAKKAD 1593 SN +V VT + ++ PYW QF + + ++ Y+ ++G+ GN +V+YIFA+TKSLRT NL V++LAI D N P++ I+ + W G + C+IY +G FG SI +M +ISLDR+ VI + R +++ A+ + +W S IW P +G+ YVPEG TSC DYL + + I I + P+ +I + Y+ I+ +V HE M + A+KMN + S + K A+ Sbjct: 19 SNGSVVDKVT-------PDMAHLISPYWNQFPAMDPIWAKILTAYMIMIGMISWCGNGVVIYIFATTKSLRTPANLLVINLAISDFGIMITNT-PMMGINLYFETWVLGPMMCDIYAGLGSAFGCSSIWSMCMISLDRYQVIVKGMAG-RPMTIPLALGKIAYIWFMSSIWCLAPAFGWSRYVPEGNLTSCGIDYLERDWNPRSYLIFYSIFVYYIPLFLICYSYWFIIAAVSAHEKAMREQAKKMNVKSLRSSEDAEKSAE 271 HSP 2 Score: 127.487 bits (319), Expect = 4.846e-32 Identity = 89/262 (33.97%), Postives = 139/262 (53.05%), Query Frame = -1 Query: 6 SNSTVNSTVTIAPWHWDHEFEAIVHPYWRQFDIVPEFYHYMVGVYISIVGISGVLGNLLVLYIFASTKSLRTAPNLFVMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXINTMALISLDRFFVIAQPFQTMRALSMKKAIIMLVGVWIYSFIWASPPFWGYGNYVPEGFQTSCTFDYLTQSKGNIIFNIGMYICNFVFPVGIIIFCYYQIVKSVRLHELEMLKMAQKMNATNPTSMKTGAKKAD 791 SN +V VT + ++ PYW QF + + ++ Y+ ++G+ GN +V+YIFA+TKSLRT NL V++LAI D N P++ I+ + W G + C+IY +G FG SI +M +ISLDR+ VI + R +++ A+ + +W S IW P +G+ YVPEG TSC DYL + + I I + P+ +I + Y+ I+ +V HE M + A+KMN + S + K A+ Sbjct: 19 SNGSVVDKVT-------PDMAHLISPYWNQFPAMDPIWAKILTAYMIMIGMISWCGNGVVIYIFATTKSLRTPANLLVINLAISDFGIMITNT-PMMGINLYFETWVLGPMMCDIYAGLGSAFGCSSIWSMCMISLDRYQVIVKGMAG-RPMTIPLALGKIAYIWFMSSIWCLAPAFGWSRYVPEGNLTSCGIDYLERDWNPRSYLIFYSIFVYYIPLFLICYSYWFIIAAVSAHEKAMREQAKKMNVKSLRSSEDAEKSAE 271
BLAST of opsin-like vs. RefSeq Drosophila melanogaster
Match: gi|17137098|ref|NP_477096.1| (rhodopsin 5, isoform A [Drosophila melanogaster]) HSP 1 Score: 127.487 bits (319), Expect = 5.498e-32 Identity = 83/232 (35.78%), Postives = 139/232 (59.91%), Query Frame = 1 Query: 862 EFEAIVHPYWRQFDIVPEFYHYMVGVYIS--IVGISGVLGNLLVLYIFASTKSLRTAPNLFVMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXXNTMALISLDRFFVIAQPFQTMRALSMKKAIIMLVGVWIYSFIWASPP-FWGYGNYVPEGFQTSCTFDYLTQSKGNIIFNIGMYICNFVFPVGIIIFCYYQIVKSVRLHELEMLKMAQKMN 1548 E++ +VH +WR F P +YH G YI+ ++ +S + GN LV++IF+++KSLRT NL +++LAI DL F N P I++ G L C+IY GG+ G + T A I+ DR+ I+ P LS + +++++ W+++ ++ P F +G Y PEGF T+C+FDYLT + N +F +++ ++V P+ +I+ YY++ VR+HE + + A+KMN Sbjct: 32 EYQHMVHAHWRGFREAPIYYH--AGFYIAFIVLMLSSIFGNGLVIWIFSTSKSLRTPSNLLILNLAIFDL-FMCTN-MPHYLINATVGYIVGGDLGCDIYALNGGISGMGASITNAFIAFDRYKTISNPIDGR--LSYGQIVLLILFTWLWATPFSVLPLFQIWGRYQPEGFLTTCSFDYLTNTDENRLFVRTIFVWSYVIPMTMILVSYYKLFTHVRVHEKMLAEQAKKMN 257 HSP 2 Score: 127.487 bits (319), Expect = 5.498e-32 Identity = 83/232 (35.78%), Postives = 139/232 (59.91%), Query Frame = -1 Query: 51 EFEAIVHPYWRQFDIVPEFYHYMVGVYIS--IVGISGVLGNLLVLYIFASTKSLRTAPNLFVMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXINTMALISLDRFFVIAQPFQTMRALSMKKAIIMLVGVWIYSFIWASPP-FWGYGNYVPEGFQTSCTFDYLTQSKGNIIFNIGMYICNFVFPVGIIIFCYYQIVKSVRLHELEMLKMAQKMN 737 E++ +VH +WR F P +YH G YI+ ++ +S + GN LV++IF+++KSLRT NL +++LAI DL F N P I++ G L C+IY GG+ G + T A I+ DR+ I+ P LS + +++++ W+++ ++ P F +G Y PEGF T+C+FDYLT + N +F +++ ++V P+ +I+ YY++ VR+HE + + A+KMN Sbjct: 32 EYQHMVHAHWRGFREAPIYYH--AGFYIAFIVLMLSSIFGNGLVIWIFSTSKSLRTPSNLLILNLAIFDL-FMCTN-MPHYLINATVGYIVGGDLGCDIYALNGGISGMGASITNAFIAFDRYKTISNPIDGR--LSYGQIVLLILFTWLWATPFSVLPLFQIWGRYQPEGFLTTCSFDYLTNTDENRLFVRTIFVWSYVIPMTMILVSYYKLFTHVRVHEKMLAEQAKKMN 257
BLAST of opsin-like vs. RefSeq Drosophila melanogaster
Match: gi|665407712|ref|NP_001285859.1| (rhodopsin 5, isoform B [Drosophila melanogaster]) HSP 1 Score: 127.487 bits (319), Expect = 5.498e-32 Identity = 83/232 (35.78%), Postives = 139/232 (59.91%), Query Frame = 1 Query: 862 EFEAIVHPYWRQFDIVPEFYHYMVGVYIS--IVGISGVLGNLLVLYIFASTKSLRTAPNLFVMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXXNTMALISLDRFFVIAQPFQTMRALSMKKAIIMLVGVWIYSFIWASPP-FWGYGNYVPEGFQTSCTFDYLTQSKGNIIFNIGMYICNFVFPVGIIIFCYYQIVKSVRLHELEMLKMAQKMN 1548 E++ +VH +WR F P +YH G YI+ ++ +S + GN LV++IF+++KSLRT NL +++LAI DL F N P I++ G L C+IY GG+ G + T A I+ DR+ I+ P LS + +++++ W+++ ++ P F +G Y PEGF T+C+FDYLT + N +F +++ ++V P+ +I+ YY++ VR+HE + + A+KMN Sbjct: 32 EYQHMVHAHWRGFREAPIYYH--AGFYIAFIVLMLSSIFGNGLVIWIFSTSKSLRTPSNLLILNLAIFDL-FMCTN-MPHYLINATVGYIVGGDLGCDIYALNGGISGMGASITNAFIAFDRYKTISNPIDGR--LSYGQIVLLILFTWLWATPFSVLPLFQIWGRYQPEGFLTTCSFDYLTNTDENRLFVRTIFVWSYVIPMTMILVSYYKLFTHVRVHEKMLAEQAKKMN 257 HSP 2 Score: 127.487 bits (319), Expect = 5.498e-32 Identity = 83/232 (35.78%), Postives = 139/232 (59.91%), Query Frame = -1 Query: 51 EFEAIVHPYWRQFDIVPEFYHYMVGVYIS--IVGISGVLGNLLVLYIFASTKSLRTAPNLFVMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXINTMALISLDRFFVIAQPFQTMRALSMKKAIIMLVGVWIYSFIWASPP-FWGYGNYVPEGFQTSCTFDYLTQSKGNIIFNIGMYICNFVFPVGIIIFCYYQIVKSVRLHELEMLKMAQKMN 737 E++ +VH +WR F P +YH G YI+ ++ +S + GN LV++IF+++KSLRT NL +++LAI DL F N P I++ G L C+IY GG+ G + T A I+ DR+ I+ P LS + +++++ W+++ ++ P F +G Y PEGF T+C+FDYLT + N +F +++ ++V P+ +I+ YY++ VR+HE + + A+KMN Sbjct: 32 EYQHMVHAHWRGFREAPIYYH--AGFYIAFIVLMLSSIFGNGLVIWIFSTSKSLRTPSNLLILNLAIFDL-FMCTN-MPHYLINATVGYIVGGDLGCDIYALNGGISGMGASITNAFIAFDRYKTISNPIDGR--LSYGQIVLLILFTWLWATPFSVLPLFQIWGRYQPEGFLTTCSFDYLTNTDENRLFVRTIFVWSYVIPMTMILVSYYKLFTHVRVHEKMLAEQAKKMN 257
BLAST of opsin-like vs. RefSeq Drosophila melanogaster
Match: gi|28571739|ref|NP_524368.3| (rhodopsin 6, partial [Drosophila melanogaster]) HSP 1 Score: 127.102 bits (318), Expect = 7.184e-32 Identity = 86/243 (35.39%), Postives = 132/243 (54.32%), Query Frame = 1 Query: 862 EFEAIVHPYWRQFDIVPEFYHYMVGVYISIVGISGVLGNLLVLYIFASTKSLRTAPNLFVMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXXNTMALISLDRFFVIAQPFQTMRALSMKKAIIMLVGVWIYSFIWASPPFWGYGNYVPEGFQTSCTFDYLTQSKGNIIFNIGMYICNFVFPVGIIIFCYYQIVKSVRLHELEMLKMAQKMNATNPTSMKTGAKKA 1590 E +V PYW Q+ + + ++G I+I+G + GN +V+YIF S+K LRT N+FV++LA D FP + ++ F W G CE+YG G LFG +SI +M LI+ DR+ VI + + L+ A++ L+ VW WA P +G+ YVPEG T+C DY + N + I + ++ P+ IIF Y+ I+K+V HE M + A+KMN + + + KA Sbjct: 27 EIMHMVDPYWYQWPPLEPMWFGIIGFVIAILGTMSLAGNFIVMYIFTSSKGLRTPSNMFVVNLAFSDFMM-MFTMFPPVVLNGFYGTWIMGPFLCELYGMFGSLFGCVSIWSMTLIAYDRYCVIVKGMAR-KPLTATAAVLRLMVVWTICGAWALMPLFGWNRYVPEGNMTACGTDYFAKDWWNRSYIIVYSLWVYLTPLLTIIFSYWHIMKAVAAHEKAMREQAKKMNVASLRNSEADKSKA 267 HSP 2 Score: 127.102 bits (318), Expect = 7.184e-32 Identity = 86/243 (35.39%), Postives = 132/243 (54.32%), Query Frame = -1 Query: 9 EFEAIVHPYWRQFDIVPEFYHYMVGVYISIVGISGVLGNLLVLYIFASTKSLRTAPNLFVMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXINTMALISLDRFFVIAQPFQTMRALSMKKAIIMLVGVWIYSFIWASPPFWGYGNYVPEGFQTSCTFDYLTQSKGNIIFNIGMYICNFVFPVGIIIFCYYQIVKSVRLHELEMLKMAQKMNATNPTSMKTGAKKA 737 E +V PYW Q+ + + ++G I+I+G + GN +V+YIF S+K LRT N+FV++LA D FP + ++ F W G CE+YG G LFG +SI +M LI+ DR+ VI + + L+ A++ L+ VW WA P +G+ YVPEG T+C DY + N + I + ++ P+ IIF Y+ I+K+V HE M + A+KMN + + + KA Sbjct: 27 EIMHMVDPYWYQWPPLEPMWFGIIGFVIAILGTMSLAGNFIVMYIFTSSKGLRTPSNMFVVNLAFSDFMM-MFTMFPPVVLNGFYGTWIMGPFLCELYGMFGSLFGCVSIWSMTLIAYDRYCVIVKGMAR-KPLTATAAVLRLMVVWTICGAWALMPLFGWNRYVPEGNMTACGTDYFAKDWWNRSYIIVYSLWVYLTPLLTIIFSYWHIMKAVAAHEKAMREQAKKMNVASLRNSEADKSKA 267
BLAST of opsin-like vs. RefSeq Drosophila melanogaster
Match: gi|17136434|ref|NP_476701.1| (rhodopsin 4 [Drosophila melanogaster]) HSP 1 Score: 121.324 bits (303), Expect = 8.850e-30 Identity = 85/253 (33.60%), Postives = 135/253 (53.36%), Query Frame = 1 Query: 844 PWHWDHEFEAIVHPYWRQFDIVPEFYHYMVGVYISIVGISGVLGNLLVLYIFASTKSLRTAPNLFVMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXXNTMALISLDRFFVIAQPFQTMRALSMKKAIIMLVGVWIYSFIWASPP---FWGYGNYVPEGFQTSCTFDYLTQSKGNIIFNIGMYICNFVFPVGIIIFCYYQIVKSVRLHELEMLKMAQKMNATNPTSMKTGAKKAD 1593 P HW + E P HYM+GV+ + + +GN +V++IF+++KSLRT N+FV++LA+ DL P+ +SF+ +A G C+I+ IG G + T A I DR+ VI +P R ++ KA+IM + +W+Y W P FW +VPEG+ TSC+FDYL+ + +F ++ +FV P +I++ Y QIV V HE + + A+KMN S+++ K+ Sbjct: 40 PEHWLTQLEP------------PASMHYMLGVFYIFLFCASTVGNGMVIWIFSTSKSLRTPSNMFVLNLAVFDLIMCLKA--PIFIYNSFHRGFALGNTWCQIFASIGSYSGIGAGMTNAAIGYDRYNVITKPMN--RNMTFTKAVIMNIIIWLYCTPWVVLPLTQFWD--RFVPEGYLTSCSFDYLSDNFDTRLFVGTIFFFSFVCPTLMILYYYSQIVGHVFSHEKALREQAKKMNV---ESLRSNVDKSK 271 HSP 2 Score: 121.324 bits (303), Expect = 8.850e-30 Identity = 85/253 (33.60%), Postives = 135/253 (53.36%), Query Frame = -1 Query: 6 PWHWDHEFEAIVHPYWRQFDIVPEFYHYMVGVYISIVGISGVLGNLLVLYIFASTKSLRTAPNLFVMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXINTMALISLDRFFVIAQPFQTMRALSMKKAIIMLVGVWIYSFIWASPP---FWGYGNYVPEGFQTSCTFDYLTQSKGNIIFNIGMYICNFVFPVGIIIFCYYQIVKSVRLHELEMLKMAQKMNATNPTSMKTGAKKAD 755 P HW + E P HYM+GV+ + + +GN +V++IF+++KSLRT N+FV++LA+ DL P+ +SF+ +A G C+I+ IG G + T A I DR+ VI +P R ++ KA+IM + +W+Y W P FW +VPEG+ TSC+FDYL+ + +F ++ +FV P +I++ Y QIV V HE + + A+KMN S+++ K+ Sbjct: 40 PEHWLTQLEP------------PASMHYMLGVFYIFLFCASTVGNGMVIWIFSTSKSLRTPSNMFVLNLAVFDLIMCLKA--PIFIYNSFHRGFALGNTWCQIFASIGSYSGIGAGMTNAAIGYDRYNVITKPMN--RNMTFTKAVIMNIIIWLYCTPWVVLPLTQFWD--RFVPEGYLTSCSFDYLSDNFDTRLFVGTIFFFSFVCPTLMILYYYSQIVGHVFSHEKALREQAKKMNV---ESLRSNVDKSK 271 The following BLAST results are available for this feature:
BLAST of opsin-like vs. uniprot
Analysis Date: 2016-03-08 (Phagocata morgani BLASTX Swissprot Uniprot) Total hits: 5
BLAST of opsin-like vs. Smed Unigenes AA
Analysis Date: 2016-03-09 (Phagocata morgani BLASTX Schmidtea mediterranea) Total hits: 5
BLAST of opsin-like vs. RefSeq Human
Analysis Date: 2016-03-09 (Phagocata morgani BLASTX Human) Total hits: 5
BLAST of opsin-like vs. RefSeq Drosophila melanogaster
Analysis Date: 2016-03-09 (Phagocata morgani BLASTX Drosophila melanogaster) Total hits: 5
Sequences
The following sequences are available for this feature:
mRNA sequence >Pmo_026986 ID=Pmo_026986|Name=opsin-like|organism=Phagocata morgani|type=mRNA|length=1598bp Design Primers for opsin-like back to top protein sequence >Pmo_026986-protein ID=Pmo_026986-protein|Name=opsin-like|organism=Phagocata morgani|type=polypeptide|length=301bpback to top coding sequence >Pmo_026986.694.1596 ID=Pmo_026986.694.1596|Name=Pmo_026986.694.1596|organism=Phagocata morgani|type=CDS|length=903bpback to top Gene Groups
opsin-like is similar in sequence to the genes of this group: GG7488
Gene Group Protein Sequences >SMU15026624 |