Overview
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of laminin vs. RefSeq Human
Match: gi|578798995|ref|XP_006710657.1| (PREDICTED: basement membrane-specific heparan sulfate proteoglycan core protein isoform X2 [Homo sapiens]) HSP 1 Score: 190.274 bits (482), Expect = 1.082e-47 Identity = 137/503 (27.24%), Postives = 219/503 (43.54%), Query Frame = 2 Query: 2069 CELNQRKCKNEICIDENKFCDGKDDCGDNSDE-DRQRCNECNPNSIHCDFLNNSNPNKRCVIKHWQCDGIDDCGNNFDELNCPVKNQNRCIG-THFLC-NNNTLIPRSYWCDGEPDCLSMEDEIDCSDPQVIEPVKQMQISIFTNSTLILTCKMSGRPVPTISWRFNWDHLPVNLNHNITTTTSNCSMITSTLLIKDISTDHSGVYSCEGISRRRVM--APDFSVSVSKGLICQKPYYNNDAWYPE---MCLRCYCSNVTDDCTSATGY-------ITKPE---------PIESGIKPSDAAIVNFKTLEYYKPAREITFANMEKMNYFINETYYQRLVPNQDYYFGGAFNMGGSWLKRYGYPMTYKLKLSGESKTYIPNPMVMIKGEVASIYYCGVKYRLPV--YASNENFENNIRIFLWEKDYWYNDYSCTVPVSRNDIINVLKEVRLALFKVKYFVGQTDFQMSKLSMQEAIETKDKYSWVGKIEKCNCPLGFSGLSCET 3499 C + C+N CI + CDG++DC D SDE D C PN C N C +K W+CDG DC + DE NCP K G T F C + N IP S+ CD E DC DE C PQV+ P ++ I T+ TC G P P I+WR NW H+P +H T TS TL+I+D+ G Y+CE ++ R ++ PD + L+ Q+ + +Y E CL C+C +T C S + +P+ P + G P ++ L+ E ++ + + ++++++ +P Q + G + G L+ Y + Y+L P+ ++M G YRL + + N R + +++W ++ PV R +++ VL+ + L + Y +S ++M + + +E+C CP+G+SGLSCE+ Sbjct: 302 CGPQEAACRNGHCIPRDYLCDGQEDCEDGSDELDCGPPPPCEPNEFPCG-------NGHCALKLWRCDGDFDCEDRTDEANCPTKRPEEVCGPTQFRCVSTNMCIPASFHCDEESDCPDRSDEFGCMPPQVVTPPRE-SIQASRGQTVTFTCVAIGVPTPIINWRLNWGHIP---SHPRVTVTSEGG--RGTLIIRDVKESDQGAYTCEAMNARGMVFGIPDGVLE----LVPQRGPCPDGHFYLEHSAACLPCFCFGITSVCQSTRRFRDQIRLRFDQPDDFKGVNVTMPAQPGTPP-----LSSTQLQIDPSLHEFQLVDLSR-RFLVHDSFWA--LPEQ--FLGNKVDSYGGSLR---YNVRYELARGMLEPVQRPDVVLM-----------GAGYRLLSRGHTPTQPGALNQRQVQFSEEHWVHESG--RPVQRAELLQVLQSLEAVLIQTVYNTKMASVGLSDIAMDTTVTHATSHGRAHSVEECRCPIGYSGLSCES 761
BLAST of laminin vs. RefSeq Human
Match: gi|578799001|ref|XP_006710660.1| (PREDICTED: basement membrane-specific heparan sulfate proteoglycan core protein isoform X9 [Homo sapiens]) HSP 1 Score: 189.889 bits (481), Expect = 1.228e-47 Identity = 137/503 (27.24%), Postives = 219/503 (43.54%), Query Frame = 2 Query: 2069 CELNQRKCKNEICIDENKFCDGKDDCGDNSDE-DRQRCNECNPNSIHCDFLNNSNPNKRCVIKHWQCDGIDDCGNNFDELNCPVKNQNRCIG-THFLC-NNNTLIPRSYWCDGEPDCLSMEDEIDCSDPQVIEPVKQMQISIFTNSTLILTCKMSGRPVPTISWRFNWDHLPVNLNHNITTTTSNCSMITSTLLIKDISTDHSGVYSCEGISRRRVM--APDFSVSVSKGLICQKPYYNNDAWYPE---MCLRCYCSNVTDDCTSATGY-------ITKPE---------PIESGIKPSDAAIVNFKTLEYYKPAREITFANMEKMNYFINETYYQRLVPNQDYYFGGAFNMGGSWLKRYGYPMTYKLKLSGESKTYIPNPMVMIKGEVASIYYCGVKYRLPV--YASNENFENNIRIFLWEKDYWYNDYSCTVPVSRNDIINVLKEVRLALFKVKYFVGQTDFQMSKLSMQEAIETKDKYSWVGKIEKCNCPLGFSGLSCET 3499 C + C+N CI + CDG++DC D SDE D C PN C N C +K W+CDG DC + DE NCP K G T F C + N IP S+ CD E DC DE C PQV+ P ++ I T+ TC G P P I+WR NW H+P +H T TS TL+I+D+ G Y+CE ++ R ++ PD + L+ Q+ + +Y E CL C+C +T C S + +P+ P + G P ++ L+ E ++ + + ++++++ +P Q + G + G L+ Y + Y+L P+ ++M G YRL + + N R + +++W ++ PV R +++ VL+ + L + Y +S ++M + + +E+C CP+G+SGLSCE+ Sbjct: 285 CGPQEAACRNGHCIPRDYLCDGQEDCEDGSDELDCGPPPPCEPNEFPCG-------NGHCALKLWRCDGDFDCEDRTDEANCPTKRPEEVCGPTQFRCVSTNMCIPASFHCDEESDCPDRSDEFGCMPPQVVTPPRE-SIQASRGQTVTFTCVAIGVPTPIINWRLNWGHIP---SHPRVTVTSEGG--RGTLIIRDVKESDQGAYTCEAMNARGMVFGIPDGVLE----LVPQRGPCPDGHFYLEHSAACLPCFCFGITSVCQSTRRFRDQIRLRFDQPDDFKGVNVTMPAQPGTPP-----LSSTQLQIDPSLHEFQLVDLSR-RFLVHDSFWA--LPEQ--FLGNKVDSYGGSLR---YNVRYELARGMLEPVQRPDVVLM-----------GAGYRLLSRGHTPTQPGALNQRQVQFSEEHWVHESG--RPVQRAELLQVLQSLEAVLIQTVYNTKMASVGLSDIAMDTTVTHATSHGRAHSVEECRCPIGYSGLSCES 744
BLAST of laminin vs. RefSeq Human
Match: gi|126012571|ref|NP_005520.4| (basement membrane-specific heparan sulfate proteoglycan core protein isoform b precursor [Homo sapiens]) HSP 1 Score: 189.889 bits (481), Expect = 1.349e-47 Identity = 137/503 (27.24%), Postives = 219/503 (43.54%), Query Frame = 2 Query: 2069 CELNQRKCKNEICIDENKFCDGKDDCGDNSDE-DRQRCNECNPNSIHCDFLNNSNPNKRCVIKHWQCDGIDDCGNNFDELNCPVKNQNRCIG-THFLC-NNNTLIPRSYWCDGEPDCLSMEDEIDCSDPQVIEPVKQMQISIFTNSTLILTCKMSGRPVPTISWRFNWDHLPVNLNHNITTTTSNCSMITSTLLIKDISTDHSGVYSCEGISRRRVM--APDFSVSVSKGLICQKPYYNNDAWYPE---MCLRCYCSNVTDDCTSATGY-------ITKPE---------PIESGIKPSDAAIVNFKTLEYYKPAREITFANMEKMNYFINETYYQRLVPNQDYYFGGAFNMGGSWLKRYGYPMTYKLKLSGESKTYIPNPMVMIKGEVASIYYCGVKYRLPV--YASNENFENNIRIFLWEKDYWYNDYSCTVPVSRNDIINVLKEVRLALFKVKYFVGQTDFQMSKLSMQEAIETKDKYSWVGKIEKCNCPLGFSGLSCET 3499 C + C+N CI + CDG++DC D SDE D C PN C N C +K W+CDG DC + DE NCP K G T F C + N IP S+ CD E DC DE C PQV+ P ++ I T+ TC G P P I+WR NW H+P +H T TS TL+I+D+ G Y+CE ++ R ++ PD + L+ Q+ + +Y E CL C+C +T C S + +P+ P + G P ++ L+ E ++ + + ++++++ +P Q + G + G L+ Y + Y+L P+ ++M G YRL + + N R + +++W ++ PV R +++ VL+ + L + Y +S ++M + + +E+C CP+G+SGLSCE+ Sbjct: 285 CGPQEAACRNGHCIPRDYLCDGQEDCEDGSDELDCGPPPPCEPNEFPCG-------NGHCALKLWRCDGDFDCEDRTDEANCPTKRPEEVCGPTQFRCVSTNMCIPASFHCDEESDCPDRSDEFGCMPPQVVTPPRE-SIQASRGQTVTFTCVAIGVPTPIINWRLNWGHIP---SHPRVTVTSEGG--RGTLIIRDVKESDQGAYTCEAMNARGMVFGIPDGVLE----LVPQRGPCPDGHFYLEHSAACLPCFCFGITSVCQSTRRFRDQIRLRFDQPDDFKGVNVTMPAQPGTPP-----LSSTQLQIDPSLHEFQLVDLSR-RFLVHDSFWA--LPEQ--FLGNKVDSYGGSLR---YNVRYELARGMLEPVQRPDVVLM-----------GAGYRLLSRGHTPTQPGALNQRQVQFSEEHWVHESG--RPVQRAELLQVLQSLEAVLIQTVYNTKMASVGLSDIAMDTTVTHATSHGRAHSVEECRCPIGYSGLSCES 744
BLAST of laminin vs. RefSeq Human
Match: gi|767903961|ref|XP_011539621.1| (PREDICTED: basement membrane-specific heparan sulfate proteoglycan core protein isoform X6 [Homo sapiens]) HSP 1 Score: 188.734 bits (478), Expect = 2.903e-47 Identity = 134/502 (26.69%), Postives = 217/502 (43.23%), Query Frame = 2 Query: 2069 CELNQRKCKNEICIDENKFCDGKDDCGDNSDE-DRQRCNECNPNSIHCDFLNNSNPNKRCVIKHWQCDGIDDCGNNFDELNCPVKNQNRCIG-THFLC-NNNTLIPRSYWCDGEPDCLSMEDEIDCSDPQVIEPVKQMQISIFTNSTLILTCKMSGRPVPTISWRFNWDHLPVNLNHNITTTTSNCSMITSTLLIKDISTDHSGVYSCEGISRRRVM--APD--FSVSVSKGLICQKPYYNNDAWYPEMCLRCYCSNVTDDCTSATGY-------ITKPE---------PIESGIKPSDAAIVNFKTLEYYKPAREITFANMEKMNYFINETYYQRLVPNQDYYFGGAFNMGGSWLKRYGYPMTYKLKLSGESKTYIPNPMVMIKGEVASIYYCGVKYRLPV--YASNENFENNIRIFLWEKDYWYNDYSCTVPVSRNDIINVLKEVRLALFKVKYFVGQTDFQMSKLSMQEAIETKDKYSWVGKIEKCNCPLGFSGLSCET 3499 C + C+N CI + CDG++DC D SDE D C PN C N C +K W+CDG DC + DE NCP K G T F C + N IP S+ CD E DC DE C PQV+ P ++ I T+ TC G P P I+WR NW H+P +H T TS TL+I+D+ G Y+CE ++ R ++ PD + + C ++ + + CL C+C +T C S + +P+ P + G P ++ L+ E ++ + + ++++++ +P Q + G + G L+ Y + Y+L P+ ++M G YRL + + N R + +++W ++ PV R +++ VL+ + L + Y +S ++M + + +E+C CP+G+SGLSCE+ Sbjct: 302 CGPQEAACRNGHCIPRDYLCDGQEDCEDGSDELDCGPPPPCEPNEFPCG-------NGHCALKLWRCDGDFDCEDRTDEANCPTKRPEEVCGPTQFRCVSTNMCIPASFHCDEESDCPDRSDEFGCMPPQVVTPPRE-SIQASRGQTVTFTCVAIGVPTPIINWRLNWGHIP---SHPRVTVTSEGG--RGTLIIRDVKESDQGAYTCEAMNARGMVFGIPDGVLELVPQRAGPCPDGHFYLE--HSAACLPCFCFGITSVCQSTRRFRDQIRLRFDQPDDFKGVNVTMPAQPGTPP-----LSSTQLQIDPSLHEFQLVDLSR-RFLVHDSFWA--LPEQ--FLGNKVDSYGGSLR---YNVRYELARGMLEPVQRPDVVLM-----------GAGYRLLSRGHTPTQPGALNQRQVQFSEEHWVHESG--RPVQRAELLQVLQSLEAVLIQTVYNTKMASVGLSDIAMDTTVTHATSHGRAHSVEECRCPIGYSGLSCES 762
BLAST of laminin vs. RefSeq Human
Match: gi|767903954|ref|XP_011539619.1| (PREDICTED: basement membrane-specific heparan sulfate proteoglycan core protein isoform X1 [Homo sapiens]) HSP 1 Score: 188.348 bits (477), Expect = 3.853e-47 Identity = 134/502 (26.69%), Postives = 217/502 (43.23%), Query Frame = 2 Query: 2069 CELNQRKCKNEICIDENKFCDGKDDCGDNSDE-DRQRCNECNPNSIHCDFLNNSNPNKRCVIKHWQCDGIDDCGNNFDELNCPVKNQNRCIG-THFLC-NNNTLIPRSYWCDGEPDCLSMEDEIDCSDPQVIEPVKQMQISIFTNSTLILTCKMSGRPVPTISWRFNWDHLPVNLNHNITTTTSNCSMITSTLLIKDISTDHSGVYSCEGISRRRVM--APD--FSVSVSKGLICQKPYYNNDAWYPEMCLRCYCSNVTDDCTSATGY-------ITKPE---------PIESGIKPSDAAIVNFKTLEYYKPAREITFANMEKMNYFINETYYQRLVPNQDYYFGGAFNMGGSWLKRYGYPMTYKLKLSGESKTYIPNPMVMIKGEVASIYYCGVKYRLPV--YASNENFENNIRIFLWEKDYWYNDYSCTVPVSRNDIINVLKEVRLALFKVKYFVGQTDFQMSKLSMQEAIETKDKYSWVGKIEKCNCPLGFSGLSCET 3499 C + C+N CI + CDG++DC D SDE D C PN C N C +K W+CDG DC + DE NCP K G T F C + N IP S+ CD E DC DE C PQV+ P ++ I T+ TC G P P I+WR NW H+P +H T TS TL+I+D+ G Y+CE ++ R ++ PD + + C ++ + + CL C+C +T C S + +P+ P + G P ++ L+ E ++ + + ++++++ +P Q + G + G L+ Y + Y+L P+ ++M G YRL + + N R + +++W ++ PV R +++ VL+ + L + Y +S ++M + + +E+C CP+G+SGLSCE+ Sbjct: 302 CGPQEAACRNGHCIPRDYLCDGQEDCEDGSDELDCGPPPPCEPNEFPCG-------NGHCALKLWRCDGDFDCEDRTDEANCPTKRPEEVCGPTQFRCVSTNMCIPASFHCDEESDCPDRSDEFGCMPPQVVTPPRE-SIQASRGQTVTFTCVAIGVPTPIINWRLNWGHIP---SHPRVTVTSEGG--RGTLIIRDVKESDQGAYTCEAMNARGMVFGIPDGVLELVPQRAGPCPDGHFYLE--HSAACLPCFCFGITSVCQSTRRFRDQIRLRFDQPDDFKGVNVTMPAQPGTPP-----LSSTQLQIDPSLHEFQLVDLSR-RFLVHDSFWA--LPEQ--FLGNKVDSYGGSLR---YNVRYELARGMLEPVQRPDVVLM-----------GAGYRLLSRGHTPTQPGALNQRQVQFSEEHWVHESG--RPVQRAELLQVLQSLEAVLIQTVYNTKMASVGLSDIAMDTTVTHATSHGRAHSVEECRCPIGYSGLSCES 762
BLAST of laminin vs. uniprot
Match: gi|1172451|sp|Q05793|PGBM_MOUSE (RecName: Full=Basement membrane-specific heparan sulfate proteoglycan core protein; Short=HSPG; Contains: RecName: Full=Endorepellin; Contains: RecName: Full=LG3 peptide; Flags: Precursor) HSP 1 Score: 183.341 bits (464), Expect = 3.786e-45 Identity = 135/504 (26.79%), Postives = 213/504 (42.26%), Query Frame = 2 Query: 2069 CELNQRKCKNEICIDENKFCDGKDDCGDNSDEDRQRCNE---CNPNSIHCDFLNNSNPNKRCVIKHWQCDGIDDCGNNFDELNCPVKNQNRCIG-THFLC-NNNTLIPRSYWCDGEPDCLSMEDEIDCSDPQVIEPVKQMQISIFTNSTLILTCKMSGRPVPTISWRFNWDHLPVNLNHNITTTTSNCSMITSTLLIKDISTDHSGVYSCEGISRRRVM--APD--FSVSVSKGLICQKPYYNNDAWYPEMCLRCYCSNVTDDCTSATGY----------------ITKPEPIESGIKPSDAAIVNFKTLEYYKPAREITFANMEKMNYFINETYYQRLVPNQDYYFGGAFNMGGSWLKRYGYPMTYKLKLSGESKTYIPNPMVMIKGEVASIYYCGVKYRLPVYASNENFEN--NIRIFLWEKDYWYNDYSCTVPVSRNDIINVLKEVRLALFKVKYFVGQTDFQMSKLSMQEAIETKDKYSWVGKIEKCNCPLGFSGLSCET 3499 C + C + CI + CDG++DC D SDE C C PN C+ N C +K W+CDG DC + DE NC VK G THF C + N IP S+ CD E DC DE C PQV+ P +Q I T+ TC +G P P I+WR NW H+P H T TS TL+I+D+ G Y+CE ++ R ++ PD + +G +Y D+ CL C+C VT+ C S+ + + P + G+ P + L+ +E ++ + + +++ ++ +P Q + G + G +L+ Y + Y+L P+ +++ G YRL N R +++W ++ PV R +++ L + L + Y +S + M + + +E+C CP+G+SGLSCE+ Sbjct: 285 CGPQEASCHSGHCIPRDYLCDGQEDCRDGSDE--LGCASPPPCEPNEFACE-------NGHCALKLWRCDGDFDCEDRTDEANCSVKQPGEVCGPTHFQCVSTNRCIPASFHCDEESDCPDRSDEFGCMPPQVVTPPQQ-SIQASRGQTVTFTCVATGVPTPIINWRLNWGHIPA---HPRVTMTSEGG--RGTLIIRDVKEADQGAYTCEAMNSRGMVFGIPDGVLELVPQRGPCPDGHFYLEDS---ASCLPCFCFGVTNVCQSSLRFRDQIRLSFDQPNDFKGVNVTMPSQPGVPPLSST-----QLQIDPALQEFQLVDLSR-RFLVHDAFWA--LPKQ--FLGNKVDSYGGFLR---YKVRYELARGMLEPVQKPDVILV-----------GAGYRLHSRGHTPTHPGTLNQRQVQLSEEHWVHESG--RPVQRAEMLQALASLEAVLLQTVYNTKMASVGLSDIVMDTTVTHTTIHGRAHSVEECRCPIGYSGLSCES 744
BLAST of laminin vs. uniprot
Match: gi|317373536|sp|P98160|PGBM_HUMAN (RecName: Full=Basement membrane-specific heparan sulfate proteoglycan core protein; Short=HSPG; AltName: Full=Perlecan; Short=PLC; Contains: RecName: Full=Endorepellin; Contains: RecName: Full=LG3 peptide; Flags: Precursor) HSP 1 Score: 162.155 bits (409), Expect = 1.000e-38 Identity = 126/475 (26.53%), Postives = 201/475 (42.32%), Query Frame = 2 Query: 2069 CELNQRKCKNEICIDENKFCDGKDDCGDNSDE-DRQRCNECNPNSIHCDFLNNSNPNKRCVIKHWQCDGIDDCGNNFDELNCPVKNQNRCIG-THFLC-NNNTLIPRSYWCDGEPDCLSMEDEIDCSDPQVIEPVKQMQISIFTNSTLILTCKMSGRPVPTISWRFNWDHLPVNLNHNITTTTSNCSMITSTLLIKDISTDHSGVYSCEGISRRRVM--APDFSVSVSKGLICQKPYYNNDAWYPE---MCLRCYCSNVTDDCTSATGY-------ITKPE---------PIESGIKPSDAAIVNFKTLEYYKPAREITFANMEKMNYFINETYYQRLVPNQDYYFGGAFNMGGSWLKRYGYPMTYKLKLSGESKTYIPNPMVMIKGEVASIYYCGVKYRLPV--YASNENFENNIRIFLWEKDYWYNDYSCTVPVSRNDIINVLKEVRLALFKVKYFVGQTDFQMSKLSMQEAI 3415 C + C+N CI + CDG++DC D SDE D C PN C N C +K W+CDG DC + DE NCP K G T F C + N IP S+ CD E DC DE C PQV+ P ++ I T+ TC G P P I+WR NW H+P +H T TS TL+I+D+ G Y+CE ++ R ++ PD + L+ Q+ + +Y E CL C+C +T C S + +P+ P + G P + L+ E ++ + + ++++++ +P Q + G + G L+ Y + Y+L P+ ++M G YRL + + N R + +++W ++ PV R +++ VL+ + L + Y +S ++M + Sbjct: 285 CGPQEAACRNGHCIPRDYLCDGQEDCEDGSDELDCGPPPPCEPNEFPCG-------NGHCALKLWRCDGDFDCEDRTDEANCPTKRPEEVCGPTQFRCVSTNMCIPASFHCDEESDCPDRSDEFGCMPPQVVTPPRE-SIQASRGQTVTFTCVAIGVPTPIINWRLNWGHIP---SHPRVTVTSEGG--RGTLIIRDVKESDQGAYTCEAMNARGMVFGIPDGVLE----LVPQRGPCPDGHFYLEHSAACLPCFCFGITSVCQSTRRFRDQIRLRFDQPDDFKGVNVTMPAQPGTPPLSST-----QLQIDPSLHEFQLVDLSR-RFLVHDSFWA--LPEQ--FLGNKVDSYGGSLR---YNVRYELARGMLEPVQRPDVVLM-----------GAGYRLLSRGHTPTQPGALNQRQVQFSEEHWVHESG--RPVQRAELLQVLQSLEAVLIQTVYNTKMASVGLSDIAMDTTV 716
BLAST of laminin vs. uniprot
Match: gi|30179887|sp|Q06561|UNC52_CAEEL (RecName: Full=Basement membrane proteoglycan; AltName: Full=Perlecan homolog; AltName: Full=Uncoordinated protein 52; Short=Protein unc-52; Flags: Precursor) HSP 1 Score: 161.384 bits (407), Expect = 1.780e-38 Identity = 180/644 (27.95%), Postives = 268/644 (41.61%), Query Frame = 2 Query: 1808 LTVTPKSITIKPGSTARFLCQLNGLEGKVIWRRTDRKSLTVNRENRLGG-------DASSLLEIKDVTRDDHGTIYECV----FNKLTEFVTLNV--------------EEECELNQRKCKNEICIDENKFCDGKDDCGDNSDEDR--QRCNECNPNSIHCDFLNNSNPNKRCVIKHWQCDGIDDCGNNFDELNCPVK-NQNRCIGTHFLCNN-NTLIPRSYWCDGEPDCLSMEDEIDCSDPQVIEPVKQMQISIFTNSTLILTCKMSGRPVPTISWRFNWDHLPVNLNHNITTTTSNCSMITSTLLIKDISTDHSGVYSCEGIS-RRRVMA-PDFSVSV----------------------SKGLICQKPYYNN--------------------DAWY-----PEMCLRCYCSNVTDDCTSATGYITKPEPIESGIKPSDAAIVNFKTLEYYKPAREITFANMEKMNYFINETYYQRLVPNQDYYFGGAFNMGGSWLKRYGYPMTYKLKLSGESKTYIPNPMVMIKGEVASIYYCGVKYRLPVYASNENFENNIRIFLWEKDYWYNDYSCTVPVSRNDIINVLKEVRLALFKVKYFVGQTDFQMSKLSMQEAIETKDKYSWVG---KIEKCNCPLGFSGLSCE 3496 +TV P ++ G F C+ R +D R R+GG D+ L I V D GT Y CV N + TL+V +C +++ C N C+ + CDG+ DC D SDE C PN C+ N +CV K W CDG DDCG+N DELNC K + + C T F C++ +P S+ CDG DC DE+ C P V++P Q + + +T LTCK P P I+WR NW PV T+ TL I D G Y+CE I+ + RV+A PD V V ++G + PY NN A++ PE CL+C+C V++DC S+ Y TK + +G DA V +E R F+ K Y + + Y+ G + YG M ++++ SG S + PMV++KG +I V+ + V S+ I + +E +Y + + +R D++ VL ++ L + + QT + +S + A+ D+Y+ G ++E+C CP G+ G SCE Sbjct: 47 ITVFPSEKEVRDGRDVSFECRA---------RTSDNSVYPTVRWARVGGPLPSSAHDSGGRLTINPVQLSDAGT-YICVSDYNGNTVEARATLSVVSYGPQEVSNGLRQAGQCMADEKACGNNECVKNDYVCDGEPDCRDRSDEANCPAISRTCEPNEFKCN-------NNKCVQKMWLCDGDDDCGDNSDELNCNAKPSSSDCKPTEFQCHDRRQCVPSSFHCDGTNDCHDGSDEVGCVQPTVVDP-PQTNLQVPRGTTFSLTCKAVAVPEPYINWRLNWG--PVCEPPRCLQTSEGG---YGTLTIHDAQPVDQGAYTCEAINVKGRVLATPDCIVRVVDDPRPQPPQPPTAPPQRASCDTRGAV--TPYPNNYGTCECKSQVTGPNCDQCKPGAFHLSEKSPEGCLKCFCFGVSNDCRSSGHYRTKDRLMFAG----DAEGVTISDIEERTIDRNTPFSFF-KTGYLTFDGTTDGVA----KYWRLPQRFLGDKVTAYGGKMEFEIEFSG-SGHHSSEPMVVLKGN-QNILVHRVRNQEHVLRSDSPVR--ITVETYETNYEQLNGAA---ATREDLLMVLADLDAFLIRATHVAHQTSTSLGDVSWEIAV---DRYTPDGLALEVEQCVCPPGYLGTSCE 646 HSP 2 Score: 58.5362 bits (140), Expect = 4.673e-7 Identity = 55/237 (23.21%), Postives = 96/237 (40.51%), Query Frame = 2 Query: 2786 PEMCLRCYCSNVTDDCTSATGYITKPEPIESGIKPSDAAIVNFKTLEYYKPAREITFANMEKMNYFINETYYQRLVPNQDYYFGGAFNMGGSWLKRYGYPMTYKLKLSGESKTYIPNPMVMIKGEVASIYYCGVKYRLPVYASNENFENNIRIFLWEKDYWYNDYSCTVPVSRNDIINVLKEVRLALFKVKYFVGQTDFQMSKLSMQEAIETKDKYSWVGKIEKCNCPLGFSGLSCE 3496 P+ C+ C+CS VT C++++ T + D + T + +P T A + R Q Y+ G + YG + Y K SG + +++ ++A Y K+R P YA + EN ++I + E + D +R ++ L ++ L K Y TD Q+ +++ A E + ++E+C CP G+ G SCE Sbjct: 715 PQGCIPCFCSGVTQQCSASSYRRTS---VSIDYARGDRDQLELTTSDSRQPYSPQTRAELSGQAIEFRSFEEAR---GQTLYWKLPEKFLGDKVTSYGGTLEYTFKFSGNGNSDQSADVILRGNDIALQY----KHREPFYA---DRENKVQIKIIETSWQRVDGQ---QATREHLLMTLADLDTLLIKSTYNDDCTDSQLLSANLEFA-EPYGQGLTAAEVEQCICPPGYVGTSCE 934
BLAST of laminin vs. uniprot
Match: gi|160409939|sp|A2ARV4|LRP2_MOUSE (RecName: Full=Low-density lipoprotein receptor-related protein 2; Short=LRP-2; AltName: Full=Glycoprotein 330; Short=gp330; AltName: Full=Megalin; Flags: Precursor) HSP 1 Score: 89.7373 bits (221), Expect = 1.260e-16 Identity = 54/128 (42.19%), Postives = 67/128 (52.34%), Query Frame = 2 Query: 2069 CELNQRKCKNEICIDENKFCDGKDDCGDNSDED-RQRCNECNPNSIHCDFLNNSNPNKRCVIKHWQCDGIDDCGNNFDEL-NCPVKNQNRCIGTHFLCNNNTLIPRSYWCDGEPDCLSMEDEIDCSDP 2446 C NQ C N CI + CDG +DCGD SDED R C N +S +N+ PN+RC+ +HW CDG DC + DEL NC ++ C F C N I +S+ CD DC DE CS P Sbjct: 2908 CSANQFHCDNGRCISSSWVCDGDNDCGDMSDEDQRHHCELQNCSSTEFTCINSRPPNRRCIPQHWVCDGDADCADALDELQNCTMR---ACSTGEFSCANGRCIRQSFRCDRRNDCGDYSDERGCSYP 3032 HSP 2 Score: 82.0333 bits (201), Expect = 3.367e-14 Identity = 45/117 (38.46%), Postives = 60/117 (51.28%), Query Frame = 2 Query: 2087 KCKNEICIDENKFCDGKDDCGDNSDEDRQRCNECNPNSIHCDFLNNSNPNKRCVIKHWQCDGIDDCGNNFDELNCPVKNQNRCIGTHFLCNNNTLIPRSYWCDGEPDCLSMEDEIDC 2437 +C N CI CDG DDCGDNSDE+ EC + C +++C+ W CD +DCG+N DE +C +K C HF C + +P++ CDG DCL DE C Sbjct: 3728 RCGNHHCIPLRWKCDGIDDCGDNSDEESCVPRECTESEFRC-------ADQQCIPSRWVCDQENDCGDNSDERDCEMKT---CHPEHFQCTSGHCVPKALACDGRADCLDASDESAC 3834 HSP 3 Score: 81.2629 bits (199), Expect = 5.263e-14 Identity = 53/161 (32.92%), Postives = 77/161 (47.83%), Query Frame = 2 Query: 2069 CELNQRKCKNEICIDENKFCDGKDDCGDNSDEDRQRC--NECNPNSIHCDFLNNSNPNKRCVIKHWQCDGIDDCGNNFDELNCPVKNQNR-CIGTHFLCNNNTLIPRSYWCDGEPDCLSMEDEIDCSDPQVIEPVKQMQISIFT-NSTLILTCKMSGRPVP 2539 C L Q +C++ C C+ + DC D SDEDR C + C N C NKRC+ ++WQCD +DDC +N DE P +R C F CNN IP+S+ CD + DC D EP+ + + + ++ +CK + R +P Sbjct: 3555 CRLGQFQCRDGNCTSPQALCNARQDCADGSDEDRVLCEHHRCEANEWQC-------ANKRCIPEYWQCDSVDDCLDNSDED--PSHCASRTCRPGQFKCNNGRCIPQSWKCDVDNDCGDYSD----------EPIHECMTAAYNCDNHTEFSCKTNYRCIP 3696 HSP 4 Score: 79.7221 bits (195), Expect = 1.628e-13 Identity = 49/163 (30.06%), Postives = 74/163 (45.40%), Query Frame = 2 Query: 2069 CELNQRKCKNEICIDENKFCDGKDDCGDNSDEDRQRCNEC---NPNSIHCDFLNNSNPNKRCVIKHWQCDGIDDCGNNFDEL--NCPVKNQNRCIGTHFLCNNNTLIPRSYWCDGEPDCLSMEDEIDCS---DPQVIEPVKQMQISIFTNSTLILTCKMSGRP 2533 C +CKN +CI CDG++DC D SDE+ C +P CD N RC+ H C+G+DDCG+ DE +C C T + C+N + + Y CD DC + DE C+ + E + + + +N I +C+ +P Sbjct: 3844 CPAAMFECKNHVCIQSFWICDGENDCVDGSDEEIHLCFNVPCESPQRFRCD-------NSRCIYGHQLCNGVDDCGDGSDEKEEHCRKPTHKPCTDTEYKCSNGNCVSQHYVCDNVDDCGDLSDETGCNLGENRTCAEKICEQNCTQLSNGGFICSCRPGFKP 3999 HSP 5 Score: 74.3294 bits (181), Expect = 7.033e-12 Identity = 49/128 (38.28%), Postives = 63/128 (49.22%), Query Frame = 2 Query: 2054 NVEEECELNQRKCKNEICIDENKFCDGKDDCGDNSDEDRQRCNECNPNSIHCDFLNNSNPNKRCVIKHWQCDGIDDCGNNFDELNCPVKNQNRCIGTHFLCNNNTLIPRSYWCDGEPDCLSMEDEIDC 2437 + E C+ N R CI + C+G DDC DNSDE C+P+ DF N C+ W+CDGIDDCG+N DE +C + C + F C + IP + CD E DC DE DC Sbjct: 3683 HTEFSCKTNYR------CIPQWAVCNGFDDCRDNSDEQGCESVPCHPSG---DFRCG---NHHCIPLRWKCDGIDDCGDNSDEESCVPR---ECTESEFRCADQQCIPSRWVCDQENDCGDNSDERDC 3795 HSP 6 Score: 74.3294 bits (181), Expect = 7.336e-12 Identity = 48/140 (34.29%), Postives = 63/140 (45.00%), Query Frame = 2 Query: 2057 VEEECELNQRKCKNEICIDENKFCDGKDDCGDNSDEDRQRCNECNPNSIHCDFLNNSNPNKRCVIKHWQCDGIDDCGNNFDELNCPVK--NQNRCIGTHFLCNNNTLIPRSYWCDGEPDCLSMEDE-------IDCSDPQ 2449 V EC ++ +C ++ CI CD ++DCGDNSDE C+P C + CV K CDG DC + DE CP + N C F C N+ I + CDGE DC+ DE + C PQ Sbjct: 3757 VPRECTESEFRCADQQCIPSRWVCDQENDCGDNSDERDCEMKTCHPEHFQC-------TSGHCVPKALACDGRADCLDASDESACPTRFPNGTYCPAAMFECKNHVCIQSFWICDGENDCVDGSDEEIHLCFNVPCESPQ 3889 HSP 7 Score: 72.0182 bits (175), Expect = 3.635e-11 Identity = 45/140 (32.14%), Postives = 68/140 (48.57%), Query Frame = 2 Query: 2063 EECELNQRKCKNEICIDENKFCDGKDDCGDNSDEDRQRC----NECNPNSIHCDFLNNSNPNKRCVIKHWQCDGIDDCGNNFDELNCPVKN-QNRCIGTHFLCNNNTLIPRSYWCDGEPDCLSMEDEIDCSDPQVIEPVK 2467 ++C + C N C+ CDG DDC DNSDE +C N C+ ++ C +C+ W+CD +DC + DE NCP ++ + C T F C+N+ IP+ + CD + DC DE +C P + Sbjct: 1023 QQCGSSSFPCNNGKCVPSIFRCDGVDDCHDNSDE--HQCGALNNTCSSSAFTCVH------GGQCIPGQWRCDKQNDCLDGSDEQNCPTRSPSSTCPPTSFTCDNHMCIPKEWVCDTDNDCSDGSDEKNCQASGTCHPTQ 1154 HSP 8 Score: 71.633 bits (174), Expect = 4.923e-11 Identity = 45/123 (36.59%), Postives = 63/123 (51.22%), Query Frame = 2 Query: 2069 CELNQRKCKN-EICIDENKFCDGKDDCGDNSDEDRQRC--NECNPNSIHCDFLNNSNPNKRCVIKHWQCDGIDDCGNNFDELNCPVKNQNRCIGTHFLCNNNTLIPRSYWCDGEPDCLSMEDE 2428 C+ + KC+ IC+ CDG +DCGD SDE+ C + C N C +P+ RC+ +W CDG DC ++ DE + + N C F C+N I S+ CDG+ DC M DE Sbjct: 2823 CQPDFAKCQTTNICVPRAFLCDGDNDCGDGSDENPIYCASHTCRSNEFQC-----VSPH-RCIPSYWFCDGEADCVDSSDEPDTCGHSLNSCSANQFHCDNGRCISSSWVCDGDNDCGDMSDE 2939 HSP 9 Score: 71.2478 bits (173), Expect = 6.392e-11 Identity = 51/145 (35.17%), Postives = 66/145 (45.52%), Query Frame = 2 Query: 2069 CELNQRKCKN-EICIDENKFCDGKDDCGDNSDED---RQRCNECNPNSIHCDFLNNSNPNKRCVIKHWQCDGIDDCGNNFDELNCPVKNQNRCIGTHFLCNNNTLIPRSYWCDGEPDCLSMEDEIDCSDPQVIEPVKQMQISIFT 2491 C +Q KC + CI+ CDG DC DNSDE + C+P+ C + C+ W+CDG DC DE N V C +HFLC+N I S+ CDG+ DC M DE DC P Q Q ++ Sbjct: 1188 CTSSQFKCADGSSCINSRYRCDGVYDCKDNSDEAGCPTRPPGMCHPDEFQC------QGDGTCIPNTWECDGHPDCIQGSDEHNGCVPKT--CSPSHFLCDNGNCIYNSWVCDGDNDCRDMSDEKDCPTQPFHCPSSQWQCPGYS 1324 HSP 10 Score: 69.3218 bits (168), Expect = 2.186e-10 Identity = 65/223 (29.15%), Postives = 94/223 (42.15%), Query Frame = 2 Query: 1847 STARFLCQLNGLEGKVIWR---------RTDRKSLTVNRENRLG------GDASSLLEIKDVTRDDHGTIYECVFNKLTEFVTLNVEEECELNQRKCKNEICIDENKFCDGKDDCGDNSDEDRQRCNE--CNPNSIHCDFLNNSNPNKRCVIKHWQCDGIDDCGNNFDELNCPVKNQNRCIGTHFLCNNNT---------LIPRSYWCDGEPDCLSMEDEIDC 2437 S+ +FLC N + W+ +D L +R RLG G+ +S + + +D + E L CE N+ +C N+ CI E CD DDC DNSDED C C P C+ N RC+ + W+CD +DCG+ DE P+ + C+ + C+N+T IP+ C+G DC DE C Sbjct: 3515 SSTQFLCGNNEKCIPIWWKCDGQKDCSDGSDESDLCPHRFCRLGQFQCRDGNCTSPQALCNARQD--------CADGSDEDRVLCEHHRCEANEWQCANKRCIPEYWQCDSVDDCLDNSDEDPSHCASRTCRPGQFKCN-------NGRCIPQSWKCDVDNDCGDYSDE---PI---HECMTAAYNCDNHTEFSCKTNYRCIPQWAVCNGFDDCRDNSDEQGC 3716 HSP 11 Score: 69.3218 bits (168), Expect = 2.319e-10 Identity = 71/258 (27.52%), Postives = 106/258 (41.09%), Query Frame = 2 Query: 1667 KIERPSLTSSTSFIVINNVLKRHEGTYVCQVLNTKVFGKII----VRTKPVLTVTPKSITIKPGSTARFLCQLNGLEGKVIWRRTDRKSLTVNRENRLGGDASSLLEI----KDVTRDDHGTIYECVFNKLTEFVTLNVEEECELNQRKCKNEICIDENKFCDGKDDCGDNSDEDRQRC--NECNPNSIHCDFLNNSNPNKRCVIKHWQCDGIDDCGNNFDELNCPVKNQNRCIGTHFLCNNNTLIPRSYWCDGEPDC 2410 KIER +LT S +VI+ V+G+ I TK + + T R Q +G+ V +T ++ + N ++ G S + + G+ Y NK + ++ C Q C N CI ++ CD +DCGD SDE C + C + C N RCV H++CD +DCG+N DE C ++ N T F C+N IP SY C+G +C Sbjct: 2575 KIERSTLTGSNREVVISTAF---------HSFGLTVYGQYIYWTDFYTKKIYRANKYDGSDLIAMTTRLPTQPSGISTVV---KTQQQQCS-NPCDQFNGGCSHICAPGPNGAECQCPHEGSWYLANDNK---YCVVDTGARCNQFQFTCLNGRCISQDWKCDNDNDCGDGSDELPTVCAFHTCRSTAFTC-------ANGRCVPYHYRCDFYNDCGDNSDEAGCLFRSCNS--TTEFTCSNGRCIPLSYVCNGINNC 2807 HSP 12 Score: 66.2402 bits (160), Expect = 1.920e-9 Identity = 45/158 (28.48%), Postives = 64/158 (40.51%), Query Frame = 2 Query: 2090 CKNEICIDENKFCDGKDDCGDNSDEDR-QRCNECNPNSIHC----------------DFLNNSNP----------------NKRCVIKHWQCDGIDDCGNNFDELNCPVKNQNRCIGTHFLC-NNNTLIPRSYWCDGEPDCLSMEDEIDCSDPQVIEP 2461 C N +CI + CD +DC D SDE Q C+P C D ++ S+ C+ ++CDG+ DC +N DE CP + C F C + T IP ++ CDG PDC+ DE + P+ P Sbjct: 1117 CDNHMCIPKEWVCDTDNDCSDGSDEKNCQASGTCHPTQFRCPDHRCISPLYVCDGDKDCVDGSDEAGCVLNCTSSQFKCADGSSCINSRYRCDGVYDCKDNSDEAGCPTRPPGMCHPDEFQCQGDGTCIPNTWECDGHPDCIQGSDEHNGCVPKTCSP 1274 HSP 13 Score: 63.1586 bits (152), Expect = 1.743e-8 Identity = 42/115 (36.52%), Postives = 53/115 (46.09%), Query Frame = 2 Query: 2105 CIDENKFCDGKDDCGDNSDED----RQRCNECNPNSIHCDFLNNSNPNKRCVIKHWQCDGIDDCGNNFDELNCPVKNQNRCIGTHFLCNNNTLIPRSYWCDGEPDCLSMEDEIDC 2437 CI CD ++DC D SDE R + C P S CD N C+ K W CD +DC + DE NC + C T F C ++ I Y CDG+ DC+ DE C Sbjct: 1079 CIPGQWRCDKQNDCLDGSDEQNCPTRSPSSTCPPTSFTCD-------NHMCIPKEWVCDTDNDCSDGSDEKNC--QASGTCHPTQFRCPDHRCISPLYVCDGDKDCVDGSDEAGC 1184 HSP 14 Score: 62.003 bits (149), Expect = 4.115e-8 Identity = 42/125 (33.60%), Postives = 61/125 (48.80%), Query Frame = 2 Query: 2078 NQRKCKNEICIDENKFCDGKDDCGDNSDEDRQRCNE-CNPNSIHCDFLNNSNPNKRCVIKHWQCDGIDDCGNNFDELNCPVKNQNRCIGTHFLCNNNTLIPRSYWCDGEPDCLSMEDEIDCSDPQ 2449 +Q C N C + ++ CD K DC D+SDE C C+ C + C+++ + CD +DC +N DE NC N + C G F C+N I +++ CDG+ DC DE C Q Sbjct: 148 DQLTCANGACYNTSQKCDHKVDCRDSSDE--ANCTTLCSQKEFQCG-------SGECILRAYVCDHDNDCEDNSDEHNC---NYDTCGGHQFTCSNGQCINQNWVCDGDDDCQDSGDEDGCESNQ 260 HSP 15 Score: 56.9954 bits (136), Expect = 1.235e-6 Identity = 39/122 (31.97%), Postives = 55/122 (45.08%), Query Frame = 2 Query: 2069 CELNQRKCKNEICIDENKFCDGKDDCGDNSDEDRQRCNECNPNSIHCDFLNNSNPNKRCVIKHWQCDGIDDCGNNFDELNCPVKNQNR-CIGTHFLC-NNNTLIPRSYWCDGEPDCLSMEDE 2428 C + +C + CI CD +DC DNSDE + C + C N +C+ ++W CDG DDC ++ DE C ++ C + C + I CDG PDC EDE Sbjct: 183 CSQKEFQCGSGECILRAYVCDHDNDCEDNSDEHNCNYDTCGGHQFTCS-------NGQCINQNWVCDGDDDCQDSGDEDGCESNQRHHTCYPREWACPGSGRCISMDKVCDGVPDCPEGEDE 297 HSP 16 Score: 55.0694 bits (131), Expect = 4.438e-6 Identity = 42/129 (32.56%), Postives = 52/129 (40.31%), Query Frame = 2 Query: 2063 EECELNQRKCKNEICIDENKFCDGKDDCGDNSDEDRQRCNECNPNSIHCDFLNNSNPNKRCVIKHWQCDGIDDCGNNFDE-LNCPVKNQNRCIGTHFLCNNNTLIPRSYWCDGEPDCLSMEDEIDCSDP 2446 +EC +C N CI + CDG DC D++DE C P S F C+ W CD DC + DE NCP C C+N +P Y CD DC DE +C P Sbjct: 26 QECGSGNFRCDNGYCIPASWRCDGTRDCLDDTDE-----IGCPPRSCGSGFF-LCPAEGTCIPSSWVCDQDKDCSDGADEQQNCP---GTTCSSQQLTCSNGQCVPIEYRCDHVSDCPDGSDERNCYYP 145 HSP 17 Score: 54.299 bits (129), Expect = 8.343e-6 Identity = 40/118 (33.90%), Postives = 56/118 (47.46%), Query Frame = 2 Query: 2090 CKNEICIDENKFCDGKDDCGDNSDEDRQRCN--ECNPNSIHCDFLNNSNPNKRCVIKHWQCDGIDDCGNNFDELNCPVKNQNRCIGTHFLC-NNNTLIPRSYWCDGEPDCLSMEDEID 2434 C N CI + C+G ++C DN D + C C P+ C N CV + + CDG +DCG+ DE N + C F C + + IP ++CDGE DC+ DE D Sbjct: 2789 CSNGRCIPLSYVCNGINNCHDNDTSDEKNCPPITCQPDFAKCQTTN------ICVPRAFLCDGDNDCGDGSDE-NPIYCASHTCRSNEFQCVSPHRCIPSYWFCDGEADCVDSSDEPD 2899
BLAST of laminin vs. uniprot
Match: gi|1708867|sp|P98158|LRP2_RAT (RecName: Full=Low-density lipoprotein receptor-related protein 2; Short=LRP-2; AltName: Full=Glycoprotein 330; Short=gp330; AltName: Full=Megalin; Flags: Precursor) HSP 1 Score: 87.8113 bits (216), Expect = 5.602e-16 Identity = 52/128 (40.62%), Postives = 68/128 (53.12%), Query Frame = 2 Query: 2069 CELNQRKCKNEICIDENKFCDGKDDCGDNSDED-RQRCNECNPNSIHCDFLNNSNPNKRCVIKHWQCDGIDDCGNNFDEL-NCPVKNQNRCIGTHFLCNNNTLIPRSYWCDGEPDCLSMEDEIDCSDP 2446 C +Q +C N CI N CDG +DCGD SDED R C N +S +N+ PN+RC+ ++W CDG DC + DEL NC ++ C F C N + +S+ CD DC DE CS P Sbjct: 2908 CRASQFQCDNGRCISGNWVCDGDNDCGDMSDEDQRHHCELQNCSSTQFTCVNSRPPNRRCIPQYWVCDGDADCSDALDELQNCTMRT---CSAGEFSCANGRCVRQSFRCDRRNDCGDYSDERGCSYP 3032 HSP 2 Score: 82.8037 bits (203), Expect = 1.775e-14 Identity = 45/117 (38.46%), Postives = 61/117 (52.14%), Query Frame = 2 Query: 2087 KCKNEICIDENKFCDGKDDCGDNSDEDRQRCNECNPNSIHCDFLNNSNPNKRCVIKHWQCDGIDDCGNNFDELNCPVKNQNRCIGTHFLCNNNTLIPRSYWCDGEPDCLSMEDEIDC 2437 +C N CI CDG DDCGDNSDE+ EC+ + C +++C+ W CD +DCG+N DE +C +K C HF C + +P++ CDG DCL DE C Sbjct: 3728 RCANHHCIPLRWKCDGTDDCGDNSDEENCVPRECSESEFRC-------ADQQCIPSRWVCDQENDCGDNSDERDCEMKT---CHPEHFQCTSGHCVPKALACDGRADCLDASDESAC 3834 HSP 3 Score: 77.7962 bits (190), Expect = 5.617e-13 Identity = 45/122 (36.89%), Postives = 61/122 (50.00%), Query Frame = 2 Query: 2069 CELNQRKCKNEICIDENKFCDGKDDCGDNSDEDRQRC--NECNPNSIHCDFLNNSNPNKRCVIKHWQCDGIDDCGNNFDELNCPVKNQNRCIGTHFLCNNNTLIPRSYWCDGEPDCLSMEDE 2428 C L Q +C++ C C+ + DC D SDEDR C + C N C NKRC+ + WQCD ++DC +N DE ++ C F CNN IP+S+ CD + DC DE Sbjct: 3555 CRLGQFQCRDGNCTSPQALCNARQDCADGSDEDRVLCEHHRCESNEWQC-------ANKRCIPQSWQCDSVNDCLDNSDEDTSHCASRT-CRPGQFKCNNGRCIPQSWKCDVDNDCGDYSDE 3668 HSP 4 Score: 74.7146 bits (182), Expect = 4.694e-12 Identity = 49/140 (35.00%), Postives = 63/140 (45.00%), Query Frame = 2 Query: 2057 VEEECELNQRKCKNEICIDENKFCDGKDDCGDNSDEDRQRCNECNPNSIHCDFLNNSNPNKRCVIKHWQCDGIDDCGNNFDELNCPVK--NQNRCIGTHFLCNNNTLIPRSYWCDGEPDCLSMEDE-------IDCSDPQ 2449 V EC ++ +C ++ CI CD ++DCGDNSDE C+P C + CV K CDG DC + DE CP + N C F C N+ I + CDGE DC+ DE I C PQ Sbjct: 3757 VPRECSESEFRCADQQCIPSRWVCDQENDCGDNSDERDCEMKTCHPEHFQC-------TSGHCVPKALACDGRADCLDASDESACPTRFPNGTYCPAAMFECKNHVCIQSFWICDGENDCVDGSDEEIHLCFNIPCESPQ 3889 HSP 5 Score: 73.1738 bits (178), Expect = 1.334e-11 Identity = 46/140 (32.86%), Postives = 66/140 (47.14%), Query Frame = 2 Query: 2063 EECELNQRKCKNEICIDENKFCDGKDDCGDNSDEDRQRC----NECNPNSIHCDFLNNSNPNKRCVIKHWQCDGIDDCGNNFDELNCPVK-NQNRCIGTHFLCNNNTLIPRSYWCDGEPDCLSMEDEIDCSDPQVIEPVK 2467 ++C C N C+ CDG DDC DNSDE +C N C+P++ C +C+ W CD +DC + DE NCP + C T F C+N+ IP+ + CD + DC DE +C +P + Sbjct: 1023 QQCGSLSFPCNNGKCVPSFFRCDGVDDCHDNSDE--HQCGVFNNTCSPSAFAC------VRGGQCIPGQWHCDRQNDCLDGSDEQNCPTHATSSTCPSTSFTCDNHVCIPKDWVCDTDNDCSDGSDEKNCQASGTCQPTQ 1154 HSP 6 Score: 73.1738 bits (178), Expect = 1.464e-11 Identity = 49/128 (38.28%), Postives = 62/128 (48.44%), Query Frame = 2 Query: 2054 NVEEECELNQRKCKNEICIDENKFCDGKDDCGDNSDEDRQRCNECNPNSIHCDFLNNSNPNKRCVIKHWQCDGIDDCGNNFDELNCPVKNQNRCIGTHFLCNNNTLIPRSYWCDGEPDCLSMEDEIDC 2437 + E C+ N R CI + C+G DDC DNSDE C+P+ DF N C+ W+CDG DDCG+N DE NC + C + F C + IP + CD E DC DE DC Sbjct: 3683 HTEFSCKTNYR------CIPQWAVCNGFDDCRDNSDEQGCESVPCHPSG---DF---RCANHHCIPLRWKCDGTDDCGDNSDEENCVPR---ECSESEFRCADQQCIPSRWVCDQENDCGDNSDERDC 3795 HSP 7 Score: 71.2478 bits (173), Expect = 5.222e-11 Identity = 44/133 (33.08%), Postives = 58/133 (43.61%), Query Frame = 2 Query: 2069 CELNQRKCKNEICIDENKFCDGKDDCGDNSDEDRQRCNECNPNSIHCDFLNNSNPNKRCVIKHWQCDGIDDCGNNFDELNCPVKNQNRCIGTHFLC-NNNTLIPRSYWCDGEPDCLSMEDEIDCSDPQVIEPV 2464 C+ Q +C + CI CDG DC D SDE N C C C+ ++CDG+ DC +N DE CP + C F C + T IP ++ CDG PDC+ DE P+ P Sbjct: 1150 CQPTQFRCPDHRCISPLYVCDGDKDCADGSDEAGCVLN-CTSAQFKC------ADGSSCINSRYRCDGVYDCRDNSDEAGCPTRPPGMCHPDEFQCQGDGTCIPNTWECDGHPDCIHGSDEHTGCVPKTCSPT 1275 HSP 8 Score: 70.0922 bits (170), Expect = 1.223e-10 Identity = 79/291 (27.15%), Postives = 119/291 (40.89%), Query Frame = 2 Query: 1640 IETELPIEA-----KIERPSLTSSTSFIVINNVLKRHEGTYVCQVLNTKVFGKII----VRTKPVLTVTPKSITIKPGSTARFLCQLNGLEGKVIWRRTDRKSLTVNRENRLGGDASSLLEI----KDVTRDDHGTIYECVFNKLTEFVTLNVEEECELNQRKCKNEICIDENKFCDGKDDCGDNSDEDRQRC--NECNPNSIHCDFLNNSNPNKRCVIKHWQCDGIDDCGNNFDELNCPVKNQNRCIGTHFLCNNNTLIPRSYWCDGEPDCL--SMEDEIDCSDPQVIEP 2461 +ET+L A KIER +LT + +V++ V+G+ I + T+ + + T R Q +G+ V +T R+ + N ++ G S + + G Y NK + ++ C Q C N CI+++ CD +DCGD SDE C + C + C N RCV H++CD +DCG+N DE C +N N T F C+N IP SY C+G +C DE +C P P Sbjct: 2561 LETDLLYWADASLQKIERSTLTGTNREVVVSTAF---------HSFGLTVYGQYIYWTDLYTRKIYRANKYDGSDLVAMTTRLPTQPSGISTVV---KTQRQQCS-NPCDQFNGGCSHICAPGPNGAECQCPHEGNWYLANDNK---YCVVDTGTRCNQLQFTCLNGHCINQDWKCDNDNDCGDGSDELPTVCAFHTCRSTAFTCG-------NGRCVPYHYRCDYYNDCGDNSDEAGCLFRNCNS--TTEFTCSNGRCIPLSYVCNGINNCHDNDTSDEKNCP-PHTCPP 2825 HSP 9 Score: 70.0922 bits (170), Expect = 1.435e-10 Identity = 44/123 (35.77%), Postives = 62/123 (50.41%), Query Frame = 2 Query: 2069 CELNQRKCKN-EICIDENKFCDGKDDCGDNSDEDRQRC--NECNPNSIHCDFLNNSNPNKRCVIKHWQCDGIDDCGNNFDELNCPVKNQNRCIGTHFLCNNNTLIPRSYWCDGEPDCLSMEDE 2428 C + KC+ IC+ CDG +DCGD SDE+ C + C N C +P +RC+ +W CDG DC + DE + + N C + F C+N I ++ CDG+ DC M DE Sbjct: 2823 CPPDFTKCQTTNICVPRAFLCDGDNDCGDGSDENPIYCASHTCRSNEFQC-----LSP-QRCIPSYWFCDGEADCADGSDEPDTCGHSVNTCRASQFQCDNGRCISGNWVCDGDNDCGDMSDE 2939 HSP 10 Score: 69.707 bits (169), Expect = 1.574e-10 Identity = 50/145 (34.48%), Postives = 66/145 (45.52%), Query Frame = 2 Query: 2069 CELNQRKCKN-EICIDENKFCDGKDDCGDNSDED---RQRCNECNPNSIHCDFLNNSNPNKRCVIKHWQCDGIDDCGNNFDELNCPVKNQNRCIGTHFLCNNNTLIPRSYWCDGEPDCLSMEDEIDCSDPQVIEPVKQMQISIFT 2491 C Q KC + CI+ CDG DC DNSDE + C+P+ C + C+ W+CDG DC + DE V C THFLC+N I +++ CDG+ DC M DE DC P Q Q ++ Sbjct: 1188 CTSAQFKCADGSSCINSRYRCDGVYDCRDNSDEAGCPTRPPGMCHPDEFQC------QGDGTCIPNTWECDGHPDCIHGSDEHTGCVPKT--CSPTHFLCDNGNCIYKAWICDGDNDCRDMSDEKDCPTQPFHCPSTQWQCPGYS 1324 HSP 11 Score: 65.855 bits (159), Expect = 2.272e-9 Identity = 47/131 (35.88%), Postives = 61/131 (46.56%), Query Frame = 2 Query: 2060 EEECELNQRKCKNEICIDENKFCDGKDDCGDNSDEDRQRCNE--CNPNSIHCDFLNNSNPNKRCVIKHWQCDGIDDCGNNFDEL--NCPVKNQNRCIGTHFLCNNN-TLIPRSYWCDGEPDCLSMEDEIDC 2437 CE N+ +C N+ CI ++ CD +DC DNSDED C C P C+ N RC+ + W+CD +DCG+ DE C N T F C N IP+ C+G DC DE C Sbjct: 3593 HHRCESNEWQCANKRCIPQSWQCDSVNDCLDNSDEDTSHCASRTCRPGQFKCN-------NGRCIPQSWKCDVDNDCGDYSDEPIDECTTAAYNCDNHTEFSCKTNYRCIPQWAVCNGFDDCRDNSDEQGC 3716 HSP 12 Score: 61.2326 bits (147), Expect = 5.667e-8 Identity = 42/125 (33.60%), Postives = 61/125 (48.80%), Query Frame = 2 Query: 2078 NQRKCKNEICIDENKFCDGKDDCGDNSDEDRQRCNE-CNPNSIHCDFLNNSNPNKRCVIKHWQCDGIDDCGNNFDELNCPVKNQNRCIGTHFLCNNNTLIPRSYWCDGEPDCLSMEDEIDCSDPQ 2449 +Q C N C + ++ CD K DC D+SDE C C+ C + C+++ + CD +DC +N DE NC N + C G F C+N I +++ CDG+ DC DE C Q Sbjct: 148 DQLTCANGACYNTSQRCDQKVDCRDSSDE--ANCTTLCSQKEFECG-------SGECILRAYVCDHDNDCEDNSDERNC---NYDTCGGHQFTCSNGQCINQNWVCDGDDDCQDSGDEDGCESNQ 260 HSP 13 Score: 59.3066 bits (142), Expect = 2.713e-7 Identity = 32/90 (35.56%), Postives = 47/90 (52.22%), Query Frame = 2 Query: 2069 CELNQR-KCKNEICIDENKFCDGKDDCGDNSDEDRQRCNECNPNSIHCDFLNNSNPNKRCVIKHWQCDGIDDCGNNFDELNCPVKNQNRC 2335 CE QR +C N C+ ++ C+G DDCGD SDE + C + P C N C+ +H+ CD ++DCG+ DE C + + C Sbjct: 3885 CESPQRFRCDNSRCVYGHQLCNGVDDCGDGSDEKEEHCRK--PTHKPCTDTEYKCSNGNCISQHYVCDNVNDCGDLSDETGCNLGDNRTC 3972 HSP 14 Score: 56.9954 bits (136), Expect = 1.097e-6 Identity = 39/122 (31.97%), Postives = 57/122 (46.72%), Query Frame = 2 Query: 2069 CELNQRKCKNEICIDENKFCDGKDDCGDNSDEDRQRCNECNPNSIHCDFLNNSNPNKRCVIKHWQCDGIDDCGNNFDELNCPV-KNQNRCIGTHFLC-NNNTLIPRSYWCDGEPDCLSMEDE 2428 C + +C + CI CD +DC DNSDE + C + C N +C+ ++W CDG DDC ++ DE C ++ +RC + C + I CDG PDC +DE Sbjct: 183 CSQKEFECGSGECILRAYVCDHDNDCEDNSDERNCNYDTCGGHQFTCS-------NGQCINQNWVCDGDDDCQDSGDEDGCESNQSHHRCYPREWACPGSGRCISIDKVCDGVPDCPEGDDE 297
BLAST of laminin vs. RefSeq Drosophila melanogaster
Match: gi|665389369|ref|NP_001284822.1| (terribly reduced optic lobes, isoform AS [Drosophila melanogaster]) HSP 1 Score: 195.282 bits (495), Expect = 7.984e-50 Identity = 167/593 (28.16%), Postives = 241/593 (40.64%), Query Frame = 2 Query: 1808 LTVTPKSITIKPGSTARFLCQLNG-LEGKVIWRRTDRKSLTVNRENRLGGDASSLLEIKDVTRDDHGTIYECVFNKLTEF-------VTLNVEE----------ECELNQRKCKNEICIDENKFCDGKDDCGDNSDEDRQRCN---ECNPNSIHCDFLNNSNPNKRCVIKHWQCDGIDDCGNNFDELNC-PVKNQNRCIGTHFLCNNNTLIPRSYWCDGEPDCLSMEDEIDCSDPQVIEPVKQMQISIFTNSTLILTCKMSGRPVPTISWRFNWDHLPVNLNHNITTTTSNCSMITSTLLIKDISTDHSGVYSCEGISRR--RVMAPDFSVSVS--KGLICQKPYYNNDAWYPEMCLRCYCSNVTDDCTSAT--GYITKPEPIESGIKPSDAAIVNFKTLEYYKPAREITFANMEKMNYFINETYYQRLVPNQDYYFGGAFNMGGSWLKRYGYPMTYKLKLSGESKTYIPNPMVMIKGEVASIYYCGVKYRLPVYASNENFENNIRIFLWEKDYWYNDYSCTVPVSRNDIINVLKEVRLALFKVKYFVGQT-DFQMSKLSMQEAIETKDKYSWVGKIEKCNCPLGFSGLSCET 3499 L P S IK F C+ G KV W R + L +R G LEI ++ +D GT Y C + V LNVE C Q C N CID++ CDG DC D SDE Q C+ +C PN C N +CV + W+CDG +DCG+N DE +C P + C F C + IP+S+ CD PDC DE+ C P I P Q +S+ L LTC +G P PTI WR NW H+P S T TL D+ SG YSCE I+ R + PD V+V + +C+ ++N A E C++C+C V C SA Y P + + + + + + P +++ N + R P Y + G+ LK YG + Y++ G + + P V+I G ++ L + +NN + W SR +I+ +L V L ++ Y + + +++ A +EKC CP G+ G SCE+ Sbjct: 694 LKTYPDSQIIKESREVIFRCRDEGPARAKVKWSRPGGRPLPPGFTDRNG-----RLEIPNIRVEDAGT-YVCEAVGYASYIPGQQVTVNLNVERYNDVGSRPESACTEYQATCMNGECIDKSSICDGNPDCSDASDE--QSCSLGLKCQPNQFMCS-------NSKCVDRTWRCDGENDCGDNSDETSCDPEPSGAPCRYNEFQCRSGHCIPKSFQCDNVPDCTDGTDEVGCMAPLPIRPPPQ-SVSLLEYEVLELTCVATGTPTPTIVWRLNWGHVP-------DKCESKSYGGTGTLRCPDMRPQDSGAYSCEIINTRGTHFVNPDTIVTVRPVRTDVCEAGFFNMLARKAEECVQCFCFGVAKACDSANLFTYAIHPPILSHRVVSVELSPLRQIVINEAAPGQDLLTLLHGVQFRATNVHFSGRETP----YLALPADYMGNQLKSYGGNLRYEVNYRGSGRP-VNGPDVIITGN---------RFTLTYRVRTQPGQNNRVSIPFVPGGWQKPDG--RKASREEIMMILANVDNILIRLGYLDSTAREVDLINIALDSAGTADKGLGSASLVEKCQCPPGYVGDSCES 1247 HSP 2 Score: 69.707 bits (169), Expect = 1.915e-11 Identity = 41/125 (32.80%), Postives = 58/125 (46.40%), Query Frame = 2 Query: 2066 ECELNQRKCKNEICIDENKFCDGKDDCGDNSDEDRQRCNECNPNSIHCDFLNNSNPNKRCVIKHWQCDGIDDCGNNFDELNCPVKNQNRCIGTHFLCNNNTLIPRSYWCDGEPDCLSMEDEIDCS 2440 EC+ N+ +C N CID K C+ DC + DE+ + C C N C+ N CV C+G +C ++ DELNC C+ F CN+ + S C+G DC DE +C Sbjct: 491 ECQANEFRCNNGDCIDARKRCNNVSDCSEGEDEN-EEC-RCYANQFRCN-------NGDCVSGSAPCNGYSECSDHSDELNC--GGTQECLPNQFRCNSGQCVSSSVRCNGRTDCQDSSDEQNCG 604 HSP 3 Score: 58.5362 bits (140), Expect = 5.128e-8 Identity = 61/259 (23.55%), Postives = 93/259 (35.91%), Query Frame = 2 Query: 2054 NVEEECELNQRKCKNEICIDENKFCDGKDDCGDNSDE-DRQRCNECNPNSIHCDFLNNSNPNKRCVIKHWQCDGIDDCGNNFDELNCPVKNQNR--------------------------CIGTHFLCNNNTLIPRSYWCDG----------EPDCLSMEDEIDCSDPQVIEPVKQMQISIFTNSTL-------ILTCKMSGRPVPTISW-RFNWDHLPVNLNHNITTTTSNCSMITSTLLIKDISTDHSGVYSCEGIS 2695 N E C NQ +C N C+ + C+G +C D+SDE + EC PN C+ + +CV +C+G DC ++ DE NC ++ C T F C N I C+G E DC + ++ID +D P Q+ + + +S + I C+ G + W R LP L I +I + +G Y CE + Sbjct: 524 NEECRCYANQFRCNNGDCVSGSAPCNGYSECSDHSDELNCGGTQECLPNQFRCN-------SGQCVSSSVRCNGRTDCQDSSDEQNCGHRHTEVSQGLETTGVFTTSTTSTTAMTPLRIICPPTSFKCENGPCISLGLKCNGRVDCPYDGSDEADCGQISNDIDPADSNDRRP-NQLNLKTYPDSQIIKESREVIFRCRDEGPARAKVKWSRPGGRPLPPGFTDR-----------NGRLEIPNIRVEDAGTYVCEAVG 763
BLAST of laminin vs. RefSeq Drosophila melanogaster
Match: gi|665389355|ref|NP_001245492.2| (terribly reduced optic lobes, isoform AL [Drosophila melanogaster]) HSP 1 Score: 195.282 bits (495), Expect = 8.869e-50 Identity = 167/593 (28.16%), Postives = 241/593 (40.64%), Query Frame = 2 Query: 1808 LTVTPKSITIKPGSTARFLCQLNG-LEGKVIWRRTDRKSLTVNRENRLGGDASSLLEIKDVTRDDHGTIYECVFNKLTEF-------VTLNVEE----------ECELNQRKCKNEICIDENKFCDGKDDCGDNSDEDRQRCN---ECNPNSIHCDFLNNSNPNKRCVIKHWQCDGIDDCGNNFDELNC-PVKNQNRCIGTHFLCNNNTLIPRSYWCDGEPDCLSMEDEIDCSDPQVIEPVKQMQISIFTNSTLILTCKMSGRPVPTISWRFNWDHLPVNLNHNITTTTSNCSMITSTLLIKDISTDHSGVYSCEGISRR--RVMAPDFSVSVS--KGLICQKPYYNNDAWYPEMCLRCYCSNVTDDCTSAT--GYITKPEPIESGIKPSDAAIVNFKTLEYYKPAREITFANMEKMNYFINETYYQRLVPNQDYYFGGAFNMGGSWLKRYGYPMTYKLKLSGESKTYIPNPMVMIKGEVASIYYCGVKYRLPVYASNENFENNIRIFLWEKDYWYNDYSCTVPVSRNDIINVLKEVRLALFKVKYFVGQT-DFQMSKLSMQEAIETKDKYSWVGKIEKCNCPLGFSGLSCET 3499 L P S IK F C+ G KV W R + L +R G LEI ++ +D GT Y C + V LNVE C Q C N CID++ CDG DC D SDE Q C+ +C PN C N +CV + W+CDG +DCG+N DE +C P + C F C + IP+S+ CD PDC DE+ C P I P Q +S+ L LTC +G P PTI WR NW H+P S T TL D+ SG YSCE I+ R + PD V+V + +C+ ++N A E C++C+C V C SA Y P + + + + + + P +++ N + R P Y + G+ LK YG + Y++ G + + P V+I G ++ L + +NN + W SR +I+ +L V L ++ Y + + +++ A +EKC CP G+ G SCE+ Sbjct: 617 LKTYPDSQIIKESREVIFRCRDEGPARAKVKWSRPGGRPLPPGFTDRNG-----RLEIPNIRVEDAGT-YVCEAVGYASYIPGQQVTVNLNVERYNDVGSRPESACTEYQATCMNGECIDKSSICDGNPDCSDASDE--QSCSLGLKCQPNQFMCS-------NSKCVDRTWRCDGENDCGDNSDETSCDPEPSGAPCRYNEFQCRSGHCIPKSFQCDNVPDCTDGTDEVGCMAPLPIRPPPQ-SVSLLEYEVLELTCVATGTPTPTIVWRLNWGHVP-------DKCESKSYGGTGTLRCPDMRPQDSGAYSCEIINTRGTHFVNPDTIVTVRPVRTDVCEAGFFNMLARKAEECVQCFCFGVAKACDSANLFTYAIHPPILSHRVVSVELSPLRQIVINEAAPGQDLLTLLHGVQFRATNVHFSGRETP----YLALPADYMGNQLKSYGGNLRYEVNYRGSGRP-VNGPDVIITGN---------RFTLTYRVRTQPGQNNRVSIPFVPGGWQKPDG--RKASREEIMMILANVDNILIRLGYLDSTAREVDLINIALDSAGTADKGLGSASLVEKCQCPPGYVGDSCES 1170 HSP 2 Score: 77.7962 bits (190), Expect = 6.048e-14 Identity = 57/218 (26.15%), Postives = 86/218 (39.45%), Query Frame = 2 Query: 2066 ECELNQRKCKNEICIDENKFCDGKDDCGDNSDEDRQRCNECNPNSIHCDFLNNSNPNKRCVIKHWQCDGIDDCGNNFDELNCPVKNQNRCIGTHFLCNNNTLIPRSYWCDGEPDCLSMEDEIDCSDPQVIEPVKQMQISIFTNSTL-------ILTCKMSGRPVPTISW-RFNWDHLPVNLNHNITTTTSNCSMITSTLLIKDISTDHSGVYSCEGIS 2695 EC+ N+ +C N CID K C+ DC + DE+ + C C N C+ N CV C+G +C ++ DELNC C+ F CN+ + S C+G DC DE +C+ Q+ + + +S + I C+ G + W R LP L I +I + +G Y CE + Sbjct: 491 ECQANEFRCNNGDCIDARKRCNNVSDCSEGEDEN-EEC-RCYANQFRCN-------NGDCVSGSAPCNGYSECSDHSDELNC--GGTQECLPNQFRCNSGQCVSSSVRCNGRTDCQDSSDEQNCAADSNDRRPNQLNLKTYPDSQIIKESREVIFRCRDEGPARAKVKWSRPGGRPLPPGFTDR-----------NGRLEIPNIRVEDAGTYVCEAVG 686 HSP 3 Score: 51.2174 bits (121), Expect = 7.744e-6 Identity = 31/94 (32.98%), Postives = 47/94 (50.00%), Query Frame = 2 Query: 2054 NVEEECELNQRKCKNEICIDENKFCDGKDDCGDNSDE-DRQRCNECNPNSIHCDFLNNSNPNKRCVIKHWQCDGIDDCGNNFDELNCPVKNQNR 2332 N E C NQ +C N C+ + C+G +C D+SDE + EC PN C+ + +CV +C+G DC ++ DE NC + +R Sbjct: 524 NEECRCYANQFRCNNGDCVSGSAPCNGYSECSDHSDELNCGGTQECLPNQFRCN-------SGQCVSSSVRCNGRTDCQDSSDEQNCAADSNDR 610
BLAST of laminin vs. RefSeq Drosophila melanogaster
Match: gi|665389377|ref|NP_001027033.3| (terribly reduced optic lobes, isoform AW [Drosophila melanogaster]) HSP 1 Score: 195.282 bits (495), Expect = 9.444e-50 Identity = 167/593 (28.16%), Postives = 241/593 (40.64%), Query Frame = 2 Query: 1808 LTVTPKSITIKPGSTARFLCQLNG-LEGKVIWRRTDRKSLTVNRENRLGGDASSLLEIKDVTRDDHGTIYECVFNKLTEF-------VTLNVEE----------ECELNQRKCKNEICIDENKFCDGKDDCGDNSDEDRQRCN---ECNPNSIHCDFLNNSNPNKRCVIKHWQCDGIDDCGNNFDELNC-PVKNQNRCIGTHFLCNNNTLIPRSYWCDGEPDCLSMEDEIDCSDPQVIEPVKQMQISIFTNSTLILTCKMSGRPVPTISWRFNWDHLPVNLNHNITTTTSNCSMITSTLLIKDISTDHSGVYSCEGISRR--RVMAPDFSVSVS--KGLICQKPYYNNDAWYPEMCLRCYCSNVTDDCTSAT--GYITKPEPIESGIKPSDAAIVNFKTLEYYKPAREITFANMEKMNYFINETYYQRLVPNQDYYFGGAFNMGGSWLKRYGYPMTYKLKLSGESKTYIPNPMVMIKGEVASIYYCGVKYRLPVYASNENFENNIRIFLWEKDYWYNDYSCTVPVSRNDIINVLKEVRLALFKVKYFVGQT-DFQMSKLSMQEAIETKDKYSWVGKIEKCNCPLGFSGLSCET 3499 L P S IK F C+ G KV W R + L +R G LEI ++ +D GT Y C + V LNVE C Q C N CID++ CDG DC D SDE Q C+ +C PN C N +CV + W+CDG +DCG+N DE +C P + C F C + IP+S+ CD PDC DE+ C P I P Q +S+ L LTC +G P PTI WR NW H+P S T TL D+ SG YSCE I+ R + PD V+V + +C+ ++N A E C++C+C V C SA Y P + + + + + + P +++ N + R P Y + G+ LK YG + Y++ G + + P V+I G ++ L + +NN + W SR +I+ +L V L ++ Y + + +++ A +EKC CP G+ G SCE+ Sbjct: 896 LKTYPDSQIIKESREVIFRCRDEGPARAKVKWSRPGGRPLPPGFTDRNG-----RLEIPNIRVEDAGT-YVCEAVGYASYIPGQQVTVNLNVERYNDVGSRPESACTEYQATCMNGECIDKSSICDGNPDCSDASDE--QSCSLGLKCQPNQFMCS-------NSKCVDRTWRCDGENDCGDNSDETSCDPEPSGAPCRYNEFQCRSGHCIPKSFQCDNVPDCTDGTDEVGCMAPLPIRPPPQ-SVSLLEYEVLELTCVATGTPTPTIVWRLNWGHVP-------DKCESKSYGGTGTLRCPDMRPQDSGAYSCEIINTRGTHFVNPDTIVTVRPVRTDVCEAGFFNMLARKAEECVQCFCFGVAKACDSANLFTYAIHPPILSHRVVSVELSPLRQIVINEAAPGQDLLTLLHGVQFRATNVHFSGRETP----YLALPADYMGNQLKSYGGNLRYEVNYRGSGRP-VNGPDVIITGN---------RFTLTYRVRTQPGQNNRVSIPFVPGGWQKPDG--RKASREEIMMILANVDNILIRLGYLDSTAREVDLINIALDSAGTADKGLGSASLVEKCQCPPGYVGDSCES 1449 HSP 2 Score: 63.1586 bits (152), Expect = 1.670e-9 Identity = 39/126 (30.95%), Postives = 53/126 (42.06%), Query Frame = 2 Query: 2066 ECELNQRKCKNEICIDENKFCDGKDDCGDNSDEDRQRCNECNPNSIHCDFLNNSNPNKRCVIKHWQCDGIDDCGNNFDELNCPVK--NQNRCIGTHFLCNNNTLIPRSYWCDGEPDCLSMEDEIDC 2437 EC+ N+ +C N CID K C+ DC + DE+ + C+ C RC+ QCDG DC + DE +C + C F C IP CD DC DE++C Sbjct: 531 ECQANEFRCNNGDCIDARKRCNNVSDCSEGEDENEECPAACSGMEYQC------RDGTRCISVSQQCDGHSDCSDGDDEEHCDGSGYDSEECRFDEFHCGTGECIPMRQVCDNIYDCNDYSDEVNC 650 HSP 3 Score: 54.299 bits (129), Expect = 8.933e-7 Identity = 39/162 (24.07%), Postives = 60/162 (37.04%), Query Frame = 2 Query: 2234 NKRCVIKHWQCDGIDDCGNNFDELNCPVKNQNRCIGTHFLCNNNTLIPRSYWCDGEPDCLSMEDEIDCSDPQVIEPVKQMQISIFTNSTL-------ILTCKMSGRPVPTISW-RFNWDHLPVNLNHNITTTTSNCSMITSTLLIKDISTDHSGVYSCEGIS 2695 N CV C+G +C ++ DELNC C+ F CN+ + S C+G DC DE +C+ Q+ + + +S + I C+ G + W R LP L I +I + +G Y CE + Sbjct: 817 NGDCVSGSAPCNGYSECSDHSDELNC--GGTQECLPNQFRCNSGQCVSSSVRCNGRTDCQDSSDEQNCAADSNDRRPNQLNLKTYPDSQIIKESREVIFRCRDEGPARAKVKWSRPGGRPLPPGFTDR-----------NGRLEIPNIRVEDAGTYVCEAVG 965
BLAST of laminin vs. RefSeq Drosophila melanogaster
Match: gi|665389383|ref|NP_001096869.3| (terribly reduced optic lobes, isoform AZ [Drosophila melanogaster]) HSP 1 Score: 195.282 bits (495), Expect = 9.677e-50 Identity = 167/593 (28.16%), Postives = 241/593 (40.64%), Query Frame = 2 Query: 1808 LTVTPKSITIKPGSTARFLCQLNG-LEGKVIWRRTDRKSLTVNRENRLGGDASSLLEIKDVTRDDHGTIYECVFNKLTEF-------VTLNVEE----------ECELNQRKCKNEICIDENKFCDGKDDCGDNSDEDRQRCN---ECNPNSIHCDFLNNSNPNKRCVIKHWQCDGIDDCGNNFDELNC-PVKNQNRCIGTHFLCNNNTLIPRSYWCDGEPDCLSMEDEIDCSDPQVIEPVKQMQISIFTNSTLILTCKMSGRPVPTISWRFNWDHLPVNLNHNITTTTSNCSMITSTLLIKDISTDHSGVYSCEGISRR--RVMAPDFSVSVS--KGLICQKPYYNNDAWYPEMCLRCYCSNVTDDCTSAT--GYITKPEPIESGIKPSDAAIVNFKTLEYYKPAREITFANMEKMNYFINETYYQRLVPNQDYYFGGAFNMGGSWLKRYGYPMTYKLKLSGESKTYIPNPMVMIKGEVASIYYCGVKYRLPVYASNENFENNIRIFLWEKDYWYNDYSCTVPVSRNDIINVLKEVRLALFKVKYFVGQT-DFQMSKLSMQEAIETKDKYSWVGKIEKCNCPLGFSGLSCET 3499 L P S IK F C+ G KV W R + L +R G LEI ++ +D GT Y C + V LNVE C Q C N CID++ CDG DC D SDE Q C+ +C PN C N +CV + W+CDG +DCG+N DE +C P + C F C + IP+S+ CD PDC DE+ C P I P Q +S+ L LTC +G P PTI WR NW H+P S T TL D+ SG YSCE I+ R + PD V+V + +C+ ++N A E C++C+C V C SA Y P + + + + + + P +++ N + R P Y + G+ LK YG + Y++ G + + P V+I G ++ L + +NN + W SR +I+ +L V L ++ Y + + +++ A +EKC CP G+ G SCE+ Sbjct: 878 LKTYPDSQIIKESREVIFRCRDEGPARAKVKWSRPGGRPLPPGFTDRNG-----RLEIPNIRVEDAGT-YVCEAVGYASYIPGQQVTVNLNVERYNDVGSRPESACTEYQATCMNGECIDKSSICDGNPDCSDASDE--QSCSLGLKCQPNQFMCS-------NSKCVDRTWRCDGENDCGDNSDETSCDPEPSGAPCRYNEFQCRSGHCIPKSFQCDNVPDCTDGTDEVGCMAPLPIRPPPQ-SVSLLEYEVLELTCVATGTPTPTIVWRLNWGHVP-------DKCESKSYGGTGTLRCPDMRPQDSGAYSCEIINTRGTHFVNPDTIVTVRPVRTDVCEAGFFNMLARKAEECVQCFCFGVAKACDSANLFTYAIHPPILSHRVVSVELSPLRQIVINEAAPGQDLLTLLHGVQFRATNVHFSGRETP----YLALPADYMGNQLKSYGGNLRYEVNYRGSGRP-VNGPDVIITGN---------RFTLTYRVRTQPGQNNRVSIPFVPGGWQKPDG--RKASREEIMMILANVDNILIRLGYLDSTAREVDLINIALDSAGTADKGLGSASLVEKCQCPPGYVGDSCES 1431 HSP 2 Score: 68.5514 bits (166), Expect = 4.315e-11 Identity = 54/213 (25.35%), Postives = 80/213 (37.56%), Query Frame = 2 Query: 2081 QRKCKNEICIDENKFCDGKDDCGDNSDEDRQRCNECNPNSIHCDFLNNSNPNKRCVIKHWQCDGIDDCGNNFDELNCPVKNQNRCIGTHFLCNNNTLIPRSYWCDGEPDCLSMEDEIDCSDPQVIEPVKQMQISIFTNSTL-------ILTCKMSGRPVPTISW-RFNWDHLPVNLNHNITTTTSNCSMITSTLLIKDISTDHSGVYSCEGIS 2695 Q +C + C E++ CD C D SDE N C N C+ N CV C+G +C ++ DELNC C+ F CN+ + S C+G DC DE +C+ Q+ + + +S + I C+ G + W R LP L I +I + +G Y CE + Sbjct: 759 QHQCPSGRCYTESERCDRHRHCEDGSDE----ANCCYANQFRCN-------NGDCVSGSAPCNGYSECSDHSDELNC--GGTQECLPNQFRCNSGQCVSSSVRCNGRTDCQDSSDEQNCAADSNDRRPNQLNLKTYPDSQIIKESREVIFRCRDEGPARAKVKWSRPGGRPLPPGFTDR-----------NGRLEIPNIRVEDAGTYVCEAVG 947
BLAST of laminin vs. RefSeq Drosophila melanogaster
Match: gi|665389363|ref|NP_001245498.2| (terribly reduced optic lobes, isoform AP [Drosophila melanogaster]) HSP 1 Score: 194.897 bits (494), Expect = 1.032e-49 Identity = 167/593 (28.16%), Postives = 241/593 (40.64%), Query Frame = 2 Query: 1808 LTVTPKSITIKPGSTARFLCQLNG-LEGKVIWRRTDRKSLTVNRENRLGGDASSLLEIKDVTRDDHGTIYECVFNKLTEF-------VTLNVEE----------ECELNQRKCKNEICIDENKFCDGKDDCGDNSDEDRQRCN---ECNPNSIHCDFLNNSNPNKRCVIKHWQCDGIDDCGNNFDELNC-PVKNQNRCIGTHFLCNNNTLIPRSYWCDGEPDCLSMEDEIDCSDPQVIEPVKQMQISIFTNSTLILTCKMSGRPVPTISWRFNWDHLPVNLNHNITTTTSNCSMITSTLLIKDISTDHSGVYSCEGISRR--RVMAPDFSVSVS--KGLICQKPYYNNDAWYPEMCLRCYCSNVTDDCTSAT--GYITKPEPIESGIKPSDAAIVNFKTLEYYKPAREITFANMEKMNYFINETYYQRLVPNQDYYFGGAFNMGGSWLKRYGYPMTYKLKLSGESKTYIPNPMVMIKGEVASIYYCGVKYRLPVYASNENFENNIRIFLWEKDYWYNDYSCTVPVSRNDIINVLKEVRLALFKVKYFVGQT-DFQMSKLSMQEAIETKDKYSWVGKIEKCNCPLGFSGLSCET 3499 L P S IK F C+ G KV W R + L +R G LEI ++ +D GT Y C + V LNVE C Q C N CID++ CDG DC D SDE Q C+ +C PN C N +CV + W+CDG +DCG+N DE +C P + C F C + IP+S+ CD PDC DE+ C P I P Q +S+ L LTC +G P PTI WR NW H+P S T TL D+ SG YSCE I+ R + PD V+V + +C+ ++N A E C++C+C V C SA Y P + + + + + + P +++ N + R P Y + G+ LK YG + Y++ G + + P V+I G ++ L + +NN + W SR +I+ +L V L ++ Y + + +++ A +EKC CP G+ G SCE+ Sbjct: 695 LKTYPDSQIIKESREVIFRCRDEGPARAKVKWSRPGGRPLPPGFTDRNG-----RLEIPNIRVEDAGT-YVCEAVGYASYIPGQQVTVNLNVERYNDVGSRPESACTEYQATCMNGECIDKSSICDGNPDCSDASDE--QSCSLGLKCQPNQFMCS-------NSKCVDRTWRCDGENDCGDNSDETSCDPEPSGAPCRYNEFQCRSGHCIPKSFQCDNVPDCTDGTDEVGCMAPLPIRPPPQ-SVSLLEYEVLELTCVATGTPTPTIVWRLNWGHVP-------DKCESKSYGGTGTLRCPDMRPQDSGAYSCEIINTRGTHFVNPDTIVTVRPVRTDVCEAGFFNMLARKAEECVQCFCFGVAKACDSANLFTYAIHPPILSHRVVSVELSPLRQIVINEAAPGQDLLTLLHGVQFRATNVHFSGRETP----YLALPADYMGNQLKSYGGNLRYEVNYRGSGRP-VNGPDVIITGN---------RFTLTYRVRTQPGQNNRVSIPFVPGGWQKPDG--RKASREEIMMILANVDNILIRLGYLDSTAREVDLINIALDSAGTADKGLGSASLVEKCQCPPGYVGDSCES 1248 HSP 2 Score: 68.5514 bits (166), Expect = 4.838e-11 Identity = 54/213 (25.35%), Postives = 80/213 (37.56%), Query Frame = 2 Query: 2081 QRKCKNEICIDENKFCDGKDDCGDNSDEDRQRCNECNPNSIHCDFLNNSNPNKRCVIKHWQCDGIDDCGNNFDELNCPVKNQNRCIGTHFLCNNNTLIPRSYWCDGEPDCLSMEDEIDCSDPQVIEPVKQMQISIFTNSTL-------ILTCKMSGRPVPTISW-RFNWDHLPVNLNHNITTTTSNCSMITSTLLIKDISTDHSGVYSCEGIS 2695 Q +C + C E++ CD C D SDE N C N C+ N CV C+G +C ++ DELNC C+ F CN+ + S C+G DC DE +C+ Q+ + + +S + I C+ G + W R LP L I +I + +G Y CE + Sbjct: 576 QHQCPSGRCYTESERCDRHRHCEDGSDE----ANCCYANQFRCN-------NGDCVSGSAPCNGYSECSDHSDELNC--GGTQECLPNQFRCNSGQCVSSSVRCNGRTDCQDSSDEQNCAADSNDRRPNQLNLKTYPDSQIIKESREVIFRCRDEGPARAKVKWSRPGGRPLPPGFTDR-----------NGRLEIPNIRVEDAGTYVCEAVG 764 HSP 3 Score: 61.2326 bits (147), Expect = 7.329e-9 Identity = 44/166 (26.51%), Postives = 67/166 (40.36%), Query Frame = 2 Query: 2066 ECELNQRKCKNEICIDENKFCDGKDDCGDNSDED------RQRCNECNPNSIHCD------------FLNNSN----------------PNKRCVIKHWQCDGIDDCGNNFDELNCPVKNQNRCIGTHFLCNNNTLIPRSYWCDGEPDCLSMEDEIDCSDPQVIEP 2461 EC+ N+ +C N CID K C+ DC + DE+ R + ++C+P +CD ++ S+ P+ RC + +CD C + DE NC C F CNN + S C+G +C DE++C Q P Sbjct: 491 ECQANEFRCNNGDCIDARKRCNNVSDCSEGEDENEECPTTRLKPSDCSPEQFYCDESCYNRSVRCNGHVDCSDGSDEVGCSLPCPQHQCPSGRCYTESERCDRHRHCEDGSDEANC-------CYANQFRCNNGDCVSGSAPCNGYSECSDHSDELNCGGTQECLP 649
BLAST of laminin vs. Smed Unigenes AA
Match: SMU15003325 (SmedAsxldir_c101543_g1_i1|m.51138|m.8906) HSP 1 Score: 1610.89 bits (4170), Expect = 0.000e+0 Identity = 759/1156 (65.66%), Postives = 944/1156 (81.66%), Query Frame = 2 Query: 53 TFNN-IPLLIFIFTKILQSEGFQPTRNVSVDVDDLKIRNMNLYFVCPYVRSKTNVIKYFKYVENTSIVLKEKQNAHGIIITLKDASDMGKYGCSVILENGMIKNATFNIIDKQLMENPKLFIYKTEETIYVTQKGNVAELSCGNLMNPSTTWYRPPQYHIYSGSKYIIKDVDRYSYGXXXXXXXXXXXXXXXXRKVILVXXXXXXXXXXXXXXVNYVETLSVQPGTVRYRSSNIAKSNDMIIWENPPGTILLDHERDLYIQSIKDDENIFYYRINRYGDSSINNVGKLIISIKKQDKL-MNLQSPVIYGGEIKMDCIS-STDFNNNTAVIWKRNSEIIFHGNTLTIPSFNKKTFGKYSCEVLQGNEKQKTRFLNLLPEQKIESKIEMTPEPGNFYLYHSGAKKELHCEIERVNNQWIMKAKDVIWTFNNKKIETIANSVLKRVDRLDTNSVSILVLTDIDEKHEGNYNCFQGSTVLSAKLLMERSNILLELAPPLQEVADNVNQGAELHCRIDTQNVNSSSIIWKFIPEKSLIETELPIEAKIERPSLTSSTSFIVINNVLKRHEGTYVCQVLNTKVFGKIIVRTKPVLTVTPKSITIKPGSTARFLCQLNGLEGKVIWRRTDRKSLTVNRENRLGGDASSLLEIKDVTRDDHGTIYECVFNKLTEFVTLNVEEECELNQRKCKNEICIDENKFCDGKDDCGDNSDEDRQRCNECNPNSIHCDFLNNSNPNKRCVIKHWQCDGIDDCGNNFDELNCPVKNQNRCIGTHFLCNNNTLIPRSYWCDGEPDCLSMEDEIDCSDPQVIEPVKQMQISIFTNSTLILTCKMSGRPVPTISWRFNWDHLPVNLNHNITTTTSNCSMITSTLLIKDISTDHSGVYSCEGISRRRVMAPDFSVSVSKGLICQKPYYNNDAWYPEMCLRCYCSNVTDDCTSATGYITKPEPIESGIKPSDAAIVNFKTLEYYKPAREITFANMEKMNYFINETYYQRLVPNQDYYFGGAFNMGGSWLKRYGYPMTYKLKLSGESKTYIPNPMVMIKGEVASIYYCGVKYRLPVYASNENFENNIRIFLWEKDYWYNDYSCTVPVSRNDIINVLKEVRLALFKVKYFVGQTDFQMSKLSMQEAIETKDKYSWVGKIEKCNCPLGFSGLSCETKID* 3511 +FN IPL IF F I Q+ GFQPTRNVSV++ + K ++FVCPY+R ++IKY+KYVEN +++KE+ + GI+I LK D+GKY CSV+ ++ I+N+T NI D+ ++E+PKLF+YK + +YV Q EL CG+L S W+RPPQYHIYSG KY I +D YSYGTYYC+ N +V V+K+ILVK + + KEK I+EEV Y+E L +RYRS N+ + D++ WE+PPGTILLD+ RD Y++SI ++ YYRINRYGD SIN +GKL+ISIK+ D + M++ +P+ YG E+K+DC++ + + VIWK++ +I +GNTLTI SF K FGKYSCE+++G++++K RF+NL P+QKIE+KIEMTP+PG +YLYHSG KKELHCEI RV+N+WIMK D+IWTFN +KI+ N +++ RLDTNSVSILV+ +++E++EG Y C+Q S + SAKLL+ERS +L+E+APPLQE+ADNVN AELHCRIDT N+NSSSI WKFIPE S E +LP EAK+ERPS SSTSF+VI NVLK+HEGTYVCQVL+TKV+G+I+VRTK VL V+PK +T+KPG ARF+C+L G++GKV+WRR D+KSLTV +E R SLLE+KD T+DD GT+YEC FNKLT++VTL V+EEC LNQRKCKNE CIDENKFCDGK+DCGDNSDEDR++CNEC+PNSIHCDFL ++NPNKRC+IKHWQCDGIDDCGNNFDELNCPVKN+++CIGTH+LCNNN LIPRSYWCDGEPDC SMEDE DCS+PQ+IEPVK ISIFTNSTL +TCKMSGRPVPTISWR+NWDHLP NL++NITTT SNCS+ITS+L +++I+TDHSG+YSCEGISRRR++APDFSVSV+KG ICQ+P+YNNDAWYP+MC+RCYCSN+TD+C+SATGY T P IES IKPSDAAIVNFKT EYYKPAREITFAN M YFINETYY++LVPN DYYFGGAFNM GSWL RYGYP+TYKL LSGE+ Y+P P+V+IKGE SIY+C VKYRLPVYASNE FENN+RI+LWE+D W+ D+ CT+P +R D INVLK VRL LFKVKY+ GQT+FQMSK+SMQEAIET + YSW K+EKC CP G+SGLSCE K++* Sbjct: 2 SFNKVIPLFIFQFL-ISQTFGFQPTRNVSVNIKNSKFSPSRIHFVCPYIRPDGDIIKYYKYVENNLVLIKEQNTSDGIVIKLKQLKDLGKYECSVLSKDKTIRNSTLNIFDRSIIESPKLFVYKVADVVYVQQMNGTVELDCGSLEEESVNWFRPPQYHIYSGHKYKIDKIDIYSYGTYYCSRGEINKYSVEVKKIILVKNMVQTKEKPIDEEVTYIEALYSTSKKIRYRSPNVISNGDIVSWEHPPGTILLDYYRDFYMKSIYENFTTIYYRINRYGDPSINKIGKLLISIKRSDDIAMDVPTPLKYGSEMKIDCLTLDGEDGEDVKVIWKKDDVVIHNGNTLTISSFKKDAFGKYSCEIIRGDQERKIRFVNLWPQQKIETKIEMTPDPGQYYLYHSGVKKELHCEILRVDNKWIMKGSDIIWTFNGRKIDVNDNIYKRKLARLDTNSVSILVIKNMNEENEGTYKCYQKSEIFSAKLLLERSGVLIEIAPPLQELADNVNHIAELHCRIDTANINSSSINWKFIPENSKSELDLPTEAKVERPSAASSTSFVVIENVLKKHEGTYVCQVLDTKVYGRIVVRTKAVLKVSPKVVTVKPGGGARFVCELIGVQGKVLWRRMDKKSLTVFKETRFDSKMLSLLEVKDATKDDDGTVYECAFNKLTDYVTLYVKEECPLNQRKCKNETCIDENKFCDGKNDCGDNSDEDRKKCNECSPNSIHCDFLKDANPNKRCIIKHWQCDGIDDCGNNFDELNCPVKNKDKCIGTHYLCNNNLLIPRSYWCDGEPDCSSMEDEEDCSNPQIIEPVKFTPISIFTNSTLTITCKMSGRPVPTISWRYNWDHLPENLDYNITTTVSNCSVITSSLTVQNINTDHSGIYSCEGISRRRIIAPDFSVSVTKGQICQRPFYNNDAWYPQMCIRCYCSNLTDECSSATGYATNPVLIESSIKPSDAAIVNFKTKEYYKPAREITFANKAAMKYFINETYYKKLVPNPDYYFGGAFNMAGSWLTRYGYPLTYKLILSGENSDYLPGPLVVIKGESDSIYHCSVKYRLPVYASNEVFENNMRIYLWEQDNWFTDHRCTLPATRRDFINVLKNVRLVLFKVKYYNGQTNFQMSKISMQEAIETTNSYSWAAKLEKCKCPAGYSGLSCENKVE* 1156
BLAST of laminin vs. Smed Unigenes AA
Match: SMU15003584 (SmedAsxldir_c102345_g1_i1|m.54199|m.2277) HSP 1 Score: 292.738 bits (748), Expect = 1.475e-83 Identity = 195/610 (31.97%), Postives = 298/610 (48.85%), Query Frame = 2 Query: 968 YGGEIKMDCISSTDFNNNTAVIWKRNSEIIFHGNTLTIPSFNKKTFGKYSCEVLQGNEKQKTRFLNLLPE--QKI----ESKIEMTPEPGNFYLYHSGAKKELHCEIERVNNQWIMKAKDVIWTFNNKKIETIANSVLKRVDRLDTNSVSILVLTDIDEKHEGNYNCFQGSTVLSAKLLMERSNILLELAPPLQEVADNVNQGAELHCRIDT-QNVNSSSIIWKFIPEKSLIETELPIEA-KIERPSLTSSTSFIVINNVLKRHEGTYVCQVLNTKVF-GKIIV---RTKPVLTVTPKSITIKPGSTARFLCQLNGLEGKVI----WRRTDRKSLTVNRENR-----LGGDASSLLEIKDVTRDDHGTIYECVFNKLTEFVTLNVEEECELNQRKCKNEICIDENKFCDGKDDCGDNSDEDRQRCNECNPNSIHCDFLNNSNPNKRCVIKHWQCDGIDDCGNNFDELNCPVKNQNRCIGTHFLCNNNTLIPRSYWCDGEPDCLSMEDEIDCSDPQVIEPVKQMQISIFTNSTLI-LTCKMSGRPVPTISWRFNWDHLPVNLNHNITTTTSNCSMITSTLLIKDISTDHSGVYSCEGI-SRRRVMAPDFSV 2728 YG + C F N W + E I + L I SF K G Y C + + + L+L+ E Q+ ESKIE+T +PG H G KKELHCEIE + + K+ W N KK + N + V+RLD VS+LV++DI + +EGNY C GS++ L++ L+E +PP+ +V + Q E HCR++ +V + ++ W F ++ L+ +P ++ + TSFIV+ G Y+C N + ++IV + K LT+TP+ I ++ G C +G+ + T+ K + R+ R +G L ++ D+ C + V + C R C+N C++ KFCD + C D SDED C EC+P S C+ N P K + HW CDG +DCGN +DE NC + N C G F C++N IPR Y CD DC EDE C+ PQ+ + ++ T S L+ LTC+ +G+P+P + WRFNW + + + +++C+ +TS+L IKD G+Y+CE + SR+R + DF V Sbjct: 236 YGERFSLRC-EVEPFYQNIKYTWYKKDEFIGNDQELVIKSFKKDNVGTYKC---VASLQLPSGKLDLMEESIQQFAFFRESKIELTTKPGPQVFVHRGEKKELHCEIETSSGN---RGKEAEWYINGKKFK---NGDIPLVNRLDGQYVSMLVISDISQINEGNYECRVGSSIKEVNLIVLLDEGLIETSPPILKVKEG--QSVEFHCRVENIPSVKNVNLKWNFESKEGLVRNNIPDSRWQLMNDEIADQTSFIVLMKAEVSDSGYYICTEPNGQTARSELIVIPDKDKNSLTITPREIRVRAGQRVDIECFSKNTQGRASGNPEFSFTNNKP--IGRDGRFKISNVGPAHKRLTAPGGLSLSDNNMDVFCSLEGRQVSSKIYVSDICPPGYRFCQNGECLENAKFCDKINHCADKSDEDPITCRECDPISRKCEINNQILPKKNYFLIHWICDGEEDCGNGYDEQNCDGFSLNNCGGKFFTCSDNKTIPRGYVCDENIDCSQGEDETGCTSPQITKTSATKVVA--TKSQLVTLTCEATGKPLPVLVWRFNWGCIQNSTRFSTNFFSTDCNSVTSSLTIKDFKAGDDGIYNCEALSSRQRSFSNDFQV 829
BLAST of laminin vs. Smed Unigenes AA
Match: SMU15035123 (SmedSxlregen_c88126_g1_i1|m.36302|m.5005) HSP 1 Score: 281.182 bits (718), Expect = 4.072e-79 Identity = 196/592 (33.11%), Postives = 280/592 (47.30%), Query Frame = 2 Query: 1034 WKRNSEIIFHGNTLTIPSFNKKTFGKYSCEVLQGNEKQKTRFLNLLPEQKIE----SKIEMTPEPGNFYLYHSGAKKELHCEIERVNNQWIMKAKDVIWTFNNKKIETIANSVLK--RVDRLDTNSVSILVLTDIDEKHEGNYNCFQGSTVLSAKLLMERSNILLELAPPLQEVADNVNQGAELHCRID-TQNVNSSSIIWKFIPEKSLIETELP-IEAKIERPSLTSSTSFIVINNVLKRHEGTYVCQVLN--TKVFGKIIVRTKPV--LTVTPKSITIKPGSTARFLCQLNGLEGKVIWR-----------RTDRKSL-TVNRENRLGGDASSLLEIKDVTRDDHGTIYECVFNKLTEFVTLNVEEECELNQRKCKNEICIDENKFCDGKDDCGDNSDEDRQRCNECNPNSIHCDFLNNSNPNKRCVIKHWQCDGIDDCGNNFDELNCPVKNQNRCIGTHFLCNNNTLIPRSYWCDGEPDCLSMEDEIDCSDPQVIEPVKQMQISIFTNSTLILTCKMSGRPVPTISWRFNWDHLPVNLNHNITTTTSNCSMITSTLLIKDISTDHSGVYSCEGISRR-RVMAPDFSVSV 2734 W RN + G TL P F+K +Y C + E Q FL + +QK+ +KIE+T PG KKELHCEIE ++ + +++ W FN K IE NS++K R+DR++ VSILVL + +EG Y C G A ++++ + ++ P +V + E HCRID N+++ ++ W+F I L + ++ + TSFI ++ G C N T I+V K +TVTP + ++ F C EG D++ L T +R+ A + IKD + C NK V + V+E C NQR+C+N C+ KFCDG DC D SDED CN C P C + P ++ + K+W CDG +DCGNN+DE+NC K+ +C G F C NN IPR CDG DCL EDE DC P +I K + S + L C+ + P+PTI WRFNW LP I+T NC + STL I + +Y+CE +S R ++ DF VS+ Sbjct: 346 WFRNGQYYQTGQTLIFPKFSKLLVDRYECRAIGTTENQVEIFLTVESDQKLTYLSYNKIELTENPGPNIALKLNEKKELHCEIEDIDG---LSGENIEWFFNGKMIE---NSLIKSYRLDRVNKRLVSILVLMNSQLDNEGRYECRYGIVRKEATVMLDIDSGMIVTNPSKIKVIEG--SPVEFHCRIDDVYNIDNRNLSWRFYNNNFQINYSLENSKWRLTESKIADHTSFINLDRATMADSGYIECISGNGLTAQSQLIVVEDKHKFNITVTPNHLRVRKNQLFEFECFGQSDEGIPYGEPKFEFPGGKPVENDKRFLVTTVGPSRIRITAPHGVNIKDELK------LICSVNKQVSAVYIQVQETCPPNQRQCQNRQCLPVGKFCDGIADCVDGSDEDPTVCNSCEPAFTTCQDVYGFAPTRKTINKNWICDGENDCGNNYDEINCEDKS-TKCNGLFFTCKNNMTIPRGQVCDGNSDCLLDEDEADCLKPVIISTSKS-HVKANIGSKVKLQCEATAHPLPTIIWRFNWGCLPNENRVTISTVKKNCRKVISTLTIDEFQAGDDAIYNCEALSSSNRALSQDFHVSI 921
BLAST of laminin vs. Smed Unigenes AA
Match: SMU15001730 (Asxlregen_comp65513_c0_seq1|m.19286|m.12982) HSP 1 Score: 280.026 bits (715), Expect = 9.075e-79 Identity = 188/587 (32.03%), Postives = 286/587 (48.72%), Query Frame = 2 Query: 1043 NSEIIFHGNTLTIPSFNKKTFGKYSCEVLQGNEKQKTRFLN------LLPEQKIESKIEMTPEPGNFYLYHSGAKKELHCEIERVNNQWIMKAKDVIWTFNNKKIET--IANSVLKRVDRLDTNSVSILVLTDIDEKHEGNYNC-FQGSTVLSAKLLMERSNILLELAPPLQ--EVADNVNQGAELHCRIDTQNVNSSSIIWKFIPEKSLIETELPIEAKIERPSLTSSTSFIVINNVLKRHEGTYVCQVLNTK--VFGKIIVRTKPVLTVTPKSITIKPGSTARFLCQLNGLEGKVIW---------RRTDRKSLTVNRENRLGGDASSLLEIKDVTRDDHGTIYECVFNKLTEFVTLNVEEECELNQRKCKNEICIDENKFCDGKDDCGDNSDEDRQRCNECNPNSIHCDFLNNSNPNKRCVIKHWQCDGIDDCGNNFDELNCPVKNQNRCIGTHFLCNNNT-LIPRSYWCDGEPDCLSMEDEIDCSDPQVI-EPVKQMQISIFTNSTLILTCKMSGRPVPTISWRFNWDHLPVNLNHNITTTTSNCSMITSTLLIKDISTDHSGVYSCEGIS-RRRVMAPDFSV 2728 N +I + TIP +K G Y C V +G + +N + E K SKIE++ PG +G K+ELHCEI VN ++ K+ IW F ++I + A ++ + RL VSI+VL +I + +EG Y C +G T + ++M +S E++P Q +V D + E HCR++ + +IW F+ +++ T + S TSFI++ + G Y+C T+ +IV + + VTP I ++ G TA F C + G + R D + TV E G L + VT +D+GT + C + T V + V+ C R C+N CI+ KFCDGK DC D SDED++ C +C+P S C+ N P HW CDG DDCGN +DE C N C G + CN+ T IPR++ CD + DC++ +DE C+ P +I E + +I+ T+ LTC+++G P+P I WRFNW L + + NC STL I + G+Y+CE +S +R + D+ + Sbjct: 337 NDRLISQSSRHTIPRLDKTNMGVYQC-VSRGRDSNTNELINYNSTYVIQAEFKSASKIELSEPPGPQIFVRAGDKRELHCEIG-VNTG--LQGKNAIWYFKGQEINSNDYARYNIQVIPRL---YVSIMVLRNIQQTNEGKYECRVRGETKEAYIIVMAKSK-NTEVSPSQQTRKVGDGIP--VEFHCRVEGYQTRNRDVIWSFLSKETGQITNIDSRWSRSDDSAAEETSFIILTQAEMKDAGVYICTEPQTRDTARATLIVESDLRIIVTPPIIKLRSGQTATFQCYVLGAGRSPDYPEFFMANGGRAADTQRTTV--EKLEAGKVQ--LTYRAVTTNDNGTRFTCRKGRSTAEVLVLVDPVCSSGSRLCRNGECINSAKFCDGKPDCADGSDEDQEFCRQCDPLSKRCETYNGVAPINPIYQAHWACDGEDDCGNGYDEAKC-FGNVLECGGLKYQCNDGTKSIPRAFVCDKDTDCVNGDDESRCTQPIIIQESLDSYKINARRGETVTLTCQVTGFPLPKIIWRFNWGCLTNERRMVVIESYRNCGATVSTLTISEFQPGDDGIYNCEALSGGKRAWSKDYQL 908
BLAST of laminin vs. Smed Unigenes AA
Match: SMU15017289 (SmedSxldir_c105356_g1_i1|m.61948|m.29338) HSP 1 Score: 248.825 bits (634), Expect = 6.333e-70 Identity = 188/619 (30.37%), Postives = 299/619 (48.30%), Query Frame = 2 Query: 968 YGGEIKMDCISSTDFNNNTAVIWKRNSEIIFHGNTLTIPSFNKKTFGKYSCEVLQGNEKQKTRFLNLLPEQKI----ESKIEMTPEPGNFYLYHSGAKKELHCEIERVNNQWIMKAKDVIWTFNNK--KIETIANSVLKRVDRLDTNSVSILVLTDIDEKHEGNYNCFQGSTVLSAKLLMERSNILLELAPPLQEVADNVNQGAELHCRID-TQNVNSSSIIWKFIPEKSLIETELPIEA-KIERPSLTSSTSFIVINNVLKRHEGTYVCQVLNTKVF-GKIIV---RTKPVLTVTPKSITIKPGSTARFLC-------------QLNGLEGKVIWRRTDRKSLTVNRENRLGGDASSLLEIKDVTRDDHGTIYECVFNKLTEFVTLNVEEECELNQRKCKNEICIDENKFCDGKDDCGDNSDEDRQRCNECNPNSIHCDFLNNSNPNKRCVIKH----WQCDGIDDCGNNFDELNCPVKNQNRCIGTHFLCNNNTLIPRSYWCDGEPDCLSMEDEIDCSDPQVIEPVKQMQISIFTNSTLILTCKMSGRPVPTISWRFNWDHLPVNLNHNITTTTSNCSMITSTLLIKDISTDHSGVYSCEGISRR-RVMAPDFSVSV 2734 +G E+ ++C S+ N WK N +II + L + SF G Y C+ + ++ + L + Q + SKIEM P G KELHCEI+ + K DV W FN K K E + L R DR T SILV+ D + ++G Y C +T S + +++ + + P + EV V E HCRID N+++ ++ W FI K+ +T +P K+ +P T +TSFI NNV G +VC ++ G++IV + ++VTP +++ F C ++ L G + ++ + +T + + + +A L+I + + C + + + ++ +C NQ+ CKN CID N FC+G +C D +DED+ C EC+P S C N++N + I H W CDG +DC + +DE C ++N C F CN+ T P +Y CDG+ DC + EDEI C P ++ K +IS +T+ +TC+++G P+P I+WR+NW + + T S C +TS L I D + +Y CE IS + R + DF V++ Sbjct: 56 FGQELLLECHVSSKIKNFIYSWWK-NEKIIGTESVLKVKSFQMNDTGLYKCKAVGVSKNNEILILETVSSQTVCDAPHSKIEMIPGTGEKIEIKPNQLKELHCEIDHESKH---KGSDVKWEFNGKPLKEEDLEKLDLTRYDRYWT---SILVIQDANSNNDGKYTCKVENTEKSVDVFVQKDRGFIFVNPQIVEVPKEVK--VEFHCRIDGIPNMSNKNLKWNFI-SKNGTKTPMPSGNWKVSKPCDTPNTSFITSNNVSMEDNGQFVCSTPKGEISRGQLIVDEIKNNIKISVTPPKVSVHRNQKFEFECLGQDLNKNPIGDLEVRFLNGSDV-KKNPKFIITELKPSNIKIEAPRGLDIPENELN-----ITCGSGNVKVPMRVEIKTQCPPNQKSCKNGDCIDSNLFCNGVKNCEDGTDEDQSLCYECDPISKPCGAYNSTNFS---TIPHYNINWACDGENDCPDGYDEKICDKPDEN-CNTQIFTCNDGTKKPFAYVCDGQKDCENAEDEIGCLKPIILGTSKN-KISASPGNTIAMTCEVTGYPLPKIAWRYNWGCIKETPRITVKETVSECQKVTSVLTINDFQSGDDAIYGCEAISGKIRAFSNDFFVNM 653 The following BLAST results are available for this feature:
BLAST of laminin vs. RefSeq Human
Analysis Date: 2016-03-08 (Girardia Sp. BLASTX Human) Total hits: 5
BLAST of laminin vs. uniprot
Analysis Date: 2016-03-08 (Girardia Sp. BLASTX Swissprot Uniprot) Total hits: 5
BLAST of laminin vs. RefSeq Drosophila melanogaster
Analysis Date: 2016-03-09 (Girardia Sp. BLASTX Drosophila melanogaster) Total hits: 5
BLAST of laminin vs. Smed Unigenes AA
Analysis Date: 2016-03-09 (Girardia Sp. BLASTX Schmidtea mediterranea) Total hits: 5
Sequences
The following sequences are available for this feature:
mRNA sequence >Gsp_020815 ID=Gsp_020815|Name=laminin|organism=Girardia sp.|type=mRNA|length=3609bp Design Primers for laminin back to top protein sequence >Gsp_020815-protein ID=Gsp_020815-protein|Name=laminin|organism=Girardia sp.|type=polypeptide|length=1155bpback to top coding sequence >Gsp_020815.47.3511 ID=Gsp_020815.47.3511|Name=Gsp_020815.47.3511|organism=Girardia sp.|type=CDS|length=3465bpback to top Gene Groups
laminin is similar in sequence to the genes of this group: GG2514
Gene Group Protein Sequences >SMU15003325 |