Overview
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of sfrp-1 vs. RefSeq Human
Match: gi|48475052|ref|NP_003004.1| (secreted frizzled-related protein 2 precursor [Homo sapiens]) HSP 1 Score: 153.295 bits (386), Expect = 1.555e-41 Identity = 90/294 (30.61%), Postives = 142/294 (48.30%), Query Frame = 1 Query: 235 TFILFVFNVNCFIGDWQSF------QSGYTIDQCYHIPDNFSLCRNVGYNRMVLPNYIQHESIEEAVQHSRVWMGLVNTQCHIDIRKFICSLYAPVCISSQRVQKVPPCRELCVTVKESCLPSMKMYGFDWPTIMKCSKFPQFQNSLCIPRT----LVPE-----KNCDLCI-KNPSYEVIANRFCLSPIVIRAKIKRIIPIGSKTMQIVLQKKSKFLKFFANFSQTDLNL-------RLKCNCTNLKFKQRALKGRWIIMAKVNQNEAVVNFITKWKRKKAEFKHSMKIIQNF 1047 + +L +C +G + Y C IP N LC + Y M LPN + HE+++E ++ + W+ LV QCH D +KF+CSL+APVC+ + + PC LCV VK+ C P M +GF WP +++C +FPQ N LCIP L+P K C+ C KN I C + ++ K+K I I T +I+L+ KSK + S+ DL L+C C + + +++M + E V+ + +W++ + EFK + I+ Sbjct: 7 SLLLLFLASHCCLGSARGLFLFGQPDFSYKRSNCKPIPANLQLCHGIEYQNMRLPNLLGHETMKEVLEQAGAWIPLVMKQCHPDTKKFLCSLFAPVCLDDLD-ETIQPCHSLCVQVKDRCAPVMSAFGFPWPDMLECDRFPQ-DNDLCIPLASSDHLLPATEEAPKVCEACKNKNDDDNDIMETLCKNDFALKIKVKEITYINRDT-KIILETKSKTIYKLNGVSERDLKKSVLWLKDSLQCTCEEM----NDINAPYLVMGQKQGGELVITSVKRWQKGQREFKRISRSIRKL 293
BLAST of sfrp-1 vs. RefSeq Human
Match: gi|188528609|ref|NP_003006.2| (secreted frizzled-related protein 5 precursor [Homo sapiens]) HSP 1 Score: 140.969 bits (354), Expect = 8.873e-37 Identity = 86/260 (33.08%), Postives = 133/260 (51.15%), Query Frame = 1 Query: 313 QCYHIPDNFSLCRNVGYNRMVLPNYIQHESIEEAVQHSRVWMGLVNTQCHIDIRKFICSLYAPVCISSQRVQKVPPCRELCVTVKESCLPSMKMYGFDWPTIMKCSKFPQFQNSLCI-------PRTLVP-EKNCDLCIKNPSYEVIANRFCLSPIVIRAKIKRIIPIGSKTMQIVLQKKSKFLKFFANFSQTD---LNLRLK----CNCTNLKFKQRALKGRWIIMAKVNQNEAVVNFITKWKRKKAEFKHSMKIIQNF 1047 QC IP + LC VGY RM LPN ++HES+ E Q + W+ L+ +CH D + F+CSL+APVC+ + + PCR LC V+ C P M+ YGF WP ++ C KFP N LCI P T P K C C S + + + C S V++ +IK I I + +++ +K K L + D L L +K C C L +L G +++M + + ++ + +W +K E K ++K + ++ Sbjct: 52 QCLDIPADLPLCHTVGYKRMRLPNLLEHESLAEVKQQASSWLPLLAKRCHSDTQVFLCSLFAPVCLD----RPIYPCRSLCEAVRAGCAPLMEAYGFPWPEMLHCHKFP-LDNDLCIAVQFGHLPATAPPVTKICAQCEMEHSADGLMEQMCSSDFVVKMRIKEIK-IENGDRKLIGAQKKKKLLKPGPLKRKDTKRLVLHMKNGAGCPCPQLD----SLAGSFLVMGRKVDGQLLLMAVYRWDKKNKEMKFAVKFMFSY 301
BLAST of sfrp-1 vs. RefSeq Human
Match: gi|56117838|ref|NP_003003.3| (secreted frizzled-related protein 1 precursor [Homo sapiens]) HSP 1 Score: 137.117 bits (344), Expect = 1.889e-35 Identity = 88/271 (32.47%), Postives = 129/271 (47.60%), Query Frame = 1 Query: 271 IGDWQSFQSGYTIDQCYHIPDNFSLCRNVGYNRMVLPNYIQHESIEEAVQHSRVWMGLVNTQCHIDIRKFICSLYAPVCISSQRVQKVPPCRELCVTVKESCLPSMKMYGFDWPTIMKCSKFPQFQNSLCIPRTLV-------PEKN--CDLCIKNPSYEVIANRFCLSPIVIRAKIKRIIPIGSK----TMQIVLQKKSKFLKFFANFSQTDLNLRLKCNCTNLKFKQRALKGRWIIMAKVNQNEAVVNFITKWKRKKAEFKHSMKIIQN 1044 IG +QS + QC IP + LC NVGY +MVLPN ++HE++ E Q + W+ L+N CH + F+CSL+APVC+ + + PCR LC V++SC P M+ +GF WP ++KC KFP + +CI T P+ C C E I C S +R KIK + + K K L C C L L ++IM + +++ ++ I KW +K EFK+ MK ++N Sbjct: 43 IGPYQSGRFYTKPPQCVDIPADLRLCHNVGYKKMVLPNLLEHETMAEVKQQASSWVPLLNKNCHAGTQVFLCSLFAPVCLD----RPIYPCRWLCEAVRDSCEPVMQFFGFYWPEMLKCDKFP--EGDVCIAMTPPNATEASKPQGTTVCPPCDNELKSEAIIEHLCASEFALRMKIKEVKKENGDKKIVPKKKKPLKLGPIKKKDLKKLVLYLKNGADCPCHQLD----NLSHHFLIMGRKVKSQYLLTAIHKWDKKNKEFKNFMKKMKN 303
BLAST of sfrp-1 vs. RefSeq Human
Match: gi|4503825|ref|NP_003496.1| (frizzled-1 [Homo sapiens]) HSP 1 Score: 96.2857 bits (238), Expect = 1.789e-20 Identity = 44/119 (36.97%), Postives = 66/119 (55.46%), Query Frame = 1 Query: 310 DQCYHIPDNFSLCRNVGYNRMVLPNYIQHESIEEAVQHSRVWMGLVNTQCHIDIRKFICSLYAPVCISSQRVQKVPPCRELCVTVKESCLPSMKMYGFDWPTIMKCSKFP-QFQNSLCI 663 D Y P + LC ++ YN+ ++PN + H + E+A + LV QC +++ F+CS+YAPVC + Q +PPCR LC ++ C M +GF WP +KC KFP LC+ Sbjct: 112 DHGYCQPISIPLCTDIAYNQTIMPNLLGHTNQEDAGLEVHQFYPLVKVQCSAELKFFLCSMYAPVCTVLE--QALPPCRSLCERARQGCEALMNKFGFQWPDTLKCEKFPVHGAGELCV 228
BLAST of sfrp-1 vs. RefSeq Human
Match: gi|13994190|ref|NP_114072.1| (frizzled-8 precursor [Homo sapiens]) HSP 1 Score: 95.1301 bits (235), Expect = 4.535e-20 Identity = 43/116 (37.07%), Postives = 65/116 (56.03%), Query Frame = 1 Query: 343 LCRNVGYNRMVLPNYIQHESIEEAVQHSRVWMGLVNTQCHIDIRKFICSLYAPVCISSQRVQKVPPCRELCVTVKESCLPSMKMYGFDWPTIMKCSKFPQFQNSLCIPRTLVPEKN 690 LC+ +GYN +PN H++ +EA + LV QC D++ F+CS+Y P+C+ + + +PPCR +C K C P M+ YGF WP M+C + P+ N P TL + N Sbjct: 42 LCKGIGYNYTYMPNQFNHDTQDEAGLEVHQFWPLVEIQCSPDLKFFLCSMYTPICLEDYK-KPLPPCRSVCERAKAGCAPLMRQYGFAWPDRMRCDRLPEQGN----PDTLCMDYN 152
BLAST of sfrp-1 vs. uniprot
Match: gi|61216791|sp|Q863H1|SFRP2_CANFA (RecName: Full=Secreted frizzled-related protein 2; Short=sFRP-2; Flags: Precursor [Canis lupus familiaris]) HSP 1 Score: 155.221 bits (391), Expect = 7.702e-42 Identity = 92/293 (31.40%), Postives = 144/293 (49.15%), Query Frame = 1 Query: 235 TFILFVFNVNCFIGDWQSFQSG-----YTIDQCYHIPDNFSLCRNVGYNRMVLPNYIQHESIEEAVQHSRVWMGLVNTQCHIDIRKFICSLYAPVCISSQRVQKVPPCRELCVTVKESCLPSMKMYGFDWPTIMKCSKFPQFQNSLCIPRT----LVPE-----KNCDLCI-KNPSYEVIANRFCLSPIVIRAKIKRIIPIGSKTMQIVLQKKSKFLKFFANFSQTDLNL-------RLKCNCTNLKFKQRALKGRWIIMAKVNQNEAVVNFITKWKRKKAEFKHSMKIIQNF 1047 + +L V +C +G + G Y C IP N LC + Y M LPN + HE+++E ++ + W+ LV QCH D +KF+CSL+APVC+ + + PC LCV VK+ C P M +GF WP +++C +FPQ N LCIP L+P K C+ C KN I C + ++ K+K I I T +I+L+ KSK + S+ DL L+C C + + +++M + E V+ + +W++ + EFK + I+ Sbjct: 7 SLLLLVLASHCCLGSARGLFFGQPDFSYKRSNCKPIPANLQLCHGIEYQNMRLPNLLGHETMKEVLEQAGAWIPLVMKQCHPDTKKFLCSLFAPVCLDDLD-ETIQPCHSLCVQVKDRCAPVMSAFGFPWPDMLECDRFPQ-DNDLCIPLASSDHLLPATEEAPKVCEACKNKNEDDNDIMETLCKNDFALKIKVKEITYINRDT-KIILETKSKTIYKLNGVSERDLKKSVLWLKDSLQCTCEEM----NDINAPYLVMGQKLGGELVITSVKRWQKGQREFKRISRSIRKL 292
BLAST of sfrp-1 vs. uniprot
Match: gi|61216828|sp|Q96HF1|SFRP2_HUMAN (RecName: Full=Secreted frizzled-related protein 2; Short=FRP-2; Short=sFRP-2; AltName: Full=Secreted apoptosis-related protein 1; Short=SARP-1; Flags: Precursor) HSP 1 Score: 153.295 bits (386), Expect = 4.121e-41 Identity = 90/294 (30.61%), Postives = 142/294 (48.30%), Query Frame = 1 Query: 235 TFILFVFNVNCFIGDWQSF------QSGYTIDQCYHIPDNFSLCRNVGYNRMVLPNYIQHESIEEAVQHSRVWMGLVNTQCHIDIRKFICSLYAPVCISSQRVQKVPPCRELCVTVKESCLPSMKMYGFDWPTIMKCSKFPQFQNSLCIPRT----LVPE-----KNCDLCI-KNPSYEVIANRFCLSPIVIRAKIKRIIPIGSKTMQIVLQKKSKFLKFFANFSQTDLNL-------RLKCNCTNLKFKQRALKGRWIIMAKVNQNEAVVNFITKWKRKKAEFKHSMKIIQNF 1047 + +L +C +G + Y C IP N LC + Y M LPN + HE+++E ++ + W+ LV QCH D +KF+CSL+APVC+ + + PC LCV VK+ C P M +GF WP +++C +FPQ N LCIP L+P K C+ C KN I C + ++ K+K I I T +I+L+ KSK + S+ DL L+C C + + +++M + E V+ + +W++ + EFK + I+ Sbjct: 7 SLLLLFLASHCCLGSARGLFLFGQPDFSYKRSNCKPIPANLQLCHGIEYQNMRLPNLLGHETMKEVLEQAGAWIPLVMKQCHPDTKKFLCSLFAPVCLDDLD-ETIQPCHSLCVQVKDRCAPVMSAFGFPWPDMLECDRFPQ-DNDLCIPLASSDHLLPATEEAPKVCEACKNKNDDDNDIMETLCKNDFALKIKVKEITYINRDT-KIILETKSKTIYKLNGVSERDLKKSVLWLKDSLQCTCEEM----NDINAPYLVMGQKQGGELVITSVKRWQKGQREFKRISRSIRKL 293
BLAST of sfrp-1 vs. uniprot
Match: gi|61216765|sp|P97299|SFRP2_MOUSE (RecName: Full=Secreted frizzled-related protein 2; Short=sFRP-2; AltName: Full=Protein SDF5; AltName: Full=Secreted apoptosis-related protein 1; Short=SARP-1; Flags: Precursor) HSP 1 Score: 152.91 bits (385), Expect = 6.243e-41 Identity = 87/267 (32.58%), Postives = 134/267 (50.19%), Query Frame = 1 Query: 298 GYTIDQCYHIPDNFSLCRNVGYNRMVLPNYIQHESIEEAVQHSRVWMGLVNTQCHIDIRKFICSLYAPVCISSQRVQKVPPCRELCVTVKESCLPSMKMYGFDWPTIMKCSKFPQFQNSLCIPRT----LVPE-----KNCDLC-IKNPSYEVIANRFCLSPIVIRAKIKRIIPIGSKTMQIVLQKKSKFLKFFANFSQTDLNL-------RLKCNCTNLKFKQRALKGRWIIMAKVNQNEAVVNFITKWKRKKAEFKHSMKIIQNF 1047 Y C IP N LC + Y M LPN + HE+++E ++ + W+ LV QCH D +KF+CSL+APVC+ + + PC LCV VK+ C P M +GF WP +++C +FPQ N LCIP L+P K C+ C KN I C + ++ K+K I I T +I+L+ KSK + S+ DL L+C C + + +++M + E V+ + +W++ + EFK + I+ Sbjct: 34 SYKRSNCKPIPANLQLCHGIEYQNMRLPNLLGHETMKEVLEQAGAWIPLVMKQCHPDTKKFLCSLFAPVCLDDLD-ETIQPCHSLCVQVKDRCAPVMSAFGFPWPDMLECDRFPQ-DNDLCIPLASSDHLLPATEEAPKVCEACKTKNEDDNDIMETLCKNDFALKIKVKEITYINRDT-KIILETKSKTIYKLNGVSERDLKKSVLWLKDSLQCTCEEM----NDINAPYLVMGQKQGGELVITSVKRWQKGQREFKRISRSIRKL 293
BLAST of sfrp-1 vs. uniprot
Match: gi|61216861|sp|Q9XSC1|SFRP5_BOVIN (RecName: Full=Secreted frizzled-related protein 5; Short=sFRP-5; Flags: Precursor) HSP 1 Score: 148.673 bits (374), Expect = 3.918e-39 Identity = 91/261 (34.87%), Postives = 135/261 (51.72%), Query Frame = 1 Query: 313 QCYHIPDNFSLCRNVGYNRMVLPNYIQHESIEEAVQHSRVWMGLVNTQCHIDIRKFICSLYAPVCISSQRVQKVPPCRELCVTVKESCLPSMKMYGFDWPTIMKCSKFPQFQNSLCI-------PRTLVP-EKNCDLCIKNPSYEVIANRFCLSPIVIRAKIKRI-IPIGSKTMQIVLQKKSKFLKFFANFSQTD---LNLRLK----CNCTNLKFKQRALKGRWIIMAKVNQNEAVVNFITKWKRKKAEFKHSMKIIQNF 1047 QC IP + LC VGY RM LPN ++HES+ E Q + W+ L+ +CH D + F+CSL+APVC+ + + PCR LC V+ C P M+ YGF WP ++ C KFP N LCI P T P K C C S + + + C S V++ +IK I I G + + I QKK K LK + D L L +K C C L +L G +++M + + ++ + +W +K E K ++K + ++ Sbjct: 50 QCLDIPADLPLCHTVGYKRMRLPNLLEHESLAEVKQQASSWLPLLAKRCHSDTQVFLCSLFAPVCLD----RPIYPCRSLCEAVRAGCAPLMEAYGFPWPEMLHCHKFP-LDNDLCIAVQFGHLPATAPPVTKICAQCEMEHSADGLMEQMCSSDFVVKMRIKEIKIENGDRKL-IGAQKKKKLLK-SGPLKRKDTKRLVLHMKNSAGCPCPQLD----SLAGSFLVMGRKVDGQLLLMAVYRWDKKNKEMKFAVKFMFSY 299
BLAST of sfrp-1 vs. uniprot
Match: gi|61216846|sp|Q9IA96|SFRP2_CHICK (RecName: Full=Secreted frizzled-related protein 2; Short=sFRP-2; Flags: Precursor [Gallus gallus]) HSP 1 Score: 147.132 bits (370), Expect = 6.810e-39 Identity = 87/267 (32.58%), Postives = 129/267 (48.31%), Query Frame = 1 Query: 298 GYTIDQCYHIPDNFSLCRNVGYNRMVLPNYIQHESIEEAVQHSRVWMGLVNTQCHIDIRKFICSLYAPVCISSQRVQKVPPCRELCVTVKESCLPSMKMYGFDWPTIMKCSKFPQFQNSLCIPR---------TLVPEKNCDLCI-KNPSYEVIANRFCLSPIVIRAKIKRIIPIGSKTMQIVLQKKSKFLKFFANFSQTD-------LNLRLKCNCTNLKFKQRALKGRWIIMAKVNQNEAVVNFITKWKRKKAEFKHSMKIIQNF 1047 Y C IP LCR + Y M LPN + HE+++E ++ + W+ LV QCH D RKF+CSL+APVCI + + PC LC VKESC P M +GF WP ++ CS+FP+ N LCIP T K CD C KN I C + ++ K+K I I T +I + KSK + ++ D L L+C C + + +++M + E V+ + +W++ + FK + I+ Sbjct: 31 SYKRSNCKPIPAPMLLCRGIEYQSMRLPNLLGHETVQEVLEQATTWIPLVQKQCHPDTRKFLCSLFAPVCIDDLD-EIIQPCHSLCEEVKESCAPVMSAFGFPWPDMLDCSRFPK-DNDLCIPLASSDHILPVTREAPKVCDACKNKNEDDNDIMENLCKNDFALKIKVKEIAYINGDT-KITPETKSKTIYKLNGLTERDLRKIVLWLKGGLQCTCDEM----NDINVPYLVMGQKQAGELVITSLKRWQKGQRAFKRFSRSIRKL 290
BLAST of sfrp-1 vs. RefSeq Drosophila melanogaster
Match: gi|442632294|ref|NP_001261836.1| (frizzled, isoform C [Drosophila melanogaster]) HSP 1 Score: 89.7373 bits (221), Expect = 7.810e-19 Identity = 50/129 (38.76%), Postives = 68/129 (52.71%), Query Frame = 1 Query: 292 QSGYTIDQCYH----IPDNFSLCRNVGYNRMVLPNYIQHESIEEAVQHSRVWMGLVNTQCHIDIRKFICSLYAPVCISSQRVQKVPPCRELCVTVKESCLPSMKMYGFDWPTIMKCSKFP-QFQNSLCI 663 SG +D H P S+C+N+ YN ++PN I H EEA + LV C D++ F+CSLY PVC +R +PPCR LC + + C MK Y F+WP ++CSKFP LC+ Sbjct: 39 SSGTELDGLPHHNRCEPITISICKNIPYNMTIMPNLIGHTKQEEAGLEVHQFAPLVKIGCSDDLQLFLCSLYVPVCTILER--PIPPCRSLCESAR-VCEKLMKTYNFNWPENLECSKFPVHGGEDLCV 164
BLAST of sfrp-1 vs. RefSeq Drosophila melanogaster
Match: gi|17864440|ref|NP_524812.1| (frizzled, isoform A [Drosophila melanogaster]) HSP 1 Score: 89.3521 bits (220), Expect = 9.463e-19 Identity = 50/129 (38.76%), Postives = 68/129 (52.71%), Query Frame = 1 Query: 292 QSGYTIDQCYH----IPDNFSLCRNVGYNRMVLPNYIQHESIEEAVQHSRVWMGLVNTQCHIDIRKFICSLYAPVCISSQRVQKVPPCRELCVTVKESCLPSMKMYGFDWPTIMKCSKFP-QFQNSLCI 663 SG +D H P S+C+N+ YN ++PN I H EEA + LV C D++ F+CSLY PVC +R +PPCR LC + + C MK Y F+WP ++CSKFP LC+ Sbjct: 39 SSGTELDGLPHHNRCEPITISICKNIPYNMTIMPNLIGHTKQEEAGLEVHQFAPLVKIGCSDDLQLFLCSLYVPVCTILER--PIPPCRSLCESAR-VCEKLMKTYNFNWPENLECSKFPVHGGEDLCV 164
BLAST of sfrp-1 vs. RefSeq Drosophila melanogaster
Match: gi|17737633|ref|NP_524155.1| (frizzled 2, isoform A [Drosophila melanogaster]) HSP 1 Score: 86.6557 bits (213), Expect = 9.260e-18 Identity = 41/126 (32.54%), Postives = 65/126 (51.59%), Query Frame = 1 Query: 343 LCRNVGYNRMVLPNYIQHESIEEAVQHSRVWMGLVNTQCHIDIRKFICSLYAPVCISSQRVQKVPPCRELCVTVKESCLPSMKMYGFDWPTIMKCSKFPQFQNSLCIPRTLVPEKNCDLCIKNPSY 720 +CR +GYN PN + HE+ +EA + LV +C D++ F+CS+Y P+C+ + +P CR +C + C P M+ Y F+WP M C P + P+ +LC++ PSY Sbjct: 71 MCRGIGYNMTSFPNEMNHETQDEAGLEVHQFWPLVEIKCSPDLKFFLCSMYTPICLEDYH-KPLPVCRSVCERARSGCAPIMQQYSFEWPERMACEHLPLHGD---------PD---NLCMEQPSY 183
BLAST of sfrp-1 vs. RefSeq Drosophila melanogaster
Match: gi|24666637|ref|NP_730389.1| (frizzled 2, isoform B [Drosophila melanogaster]) HSP 1 Score: 86.6557 bits (213), Expect = 9.260e-18 Identity = 41/126 (32.54%), Postives = 65/126 (51.59%), Query Frame = 1 Query: 343 LCRNVGYNRMVLPNYIQHESIEEAVQHSRVWMGLVNTQCHIDIRKFICSLYAPVCISSQRVQKVPPCRELCVTVKESCLPSMKMYGFDWPTIMKCSKFPQFQNSLCIPRTLVPEKNCDLCIKNPSY 720 +CR +GYN PN + HE+ +EA + LV +C D++ F+CS+Y P+C+ + +P CR +C + C P M+ Y F+WP M C P + P+ +LC++ PSY Sbjct: 71 MCRGIGYNMTSFPNEMNHETQDEAGLEVHQFWPLVEIKCSPDLKFFLCSMYTPICLEDYH-KPLPVCRSVCERARSGCAPIMQQYSFEWPERMACEHLPLHGD---------PD---NLCMEQPSY 183
BLAST of sfrp-1 vs. RefSeq Drosophila melanogaster
Match: gi|161084844|ref|NP_001097643.1| (frizzled 2, isoform C [Drosophila melanogaster]) HSP 1 Score: 86.6557 bits (213), Expect = 9.260e-18 Identity = 41/126 (32.54%), Postives = 65/126 (51.59%), Query Frame = 1 Query: 343 LCRNVGYNRMVLPNYIQHESIEEAVQHSRVWMGLVNTQCHIDIRKFICSLYAPVCISSQRVQKVPPCRELCVTVKESCLPSMKMYGFDWPTIMKCSKFPQFQNSLCIPRTLVPEKNCDLCIKNPSY 720 +CR +GYN PN + HE+ +EA + LV +C D++ F+CS+Y P+C+ + +P CR +C + C P M+ Y F+WP M C P + P+ +LC++ PSY Sbjct: 71 MCRGIGYNMTSFPNEMNHETQDEAGLEVHQFWPLVEIKCSPDLKFFLCSMYTPICLEDYH-KPLPVCRSVCERARSGCAPIMQQYSFEWPERMACEHLPLHGD---------PD---NLCMEQPSY 183
BLAST of sfrp-1 vs. Smed Unigenes AA
Match: SMU15001274 (Asxlregen_comp63361_c0_seq1|m.13574|m.6037) HSP 1 Score: 537.339 bits (1383), Expect = 0.000e+0 Identity = 272/342 (79.53%), Postives = 298/342 (87.13%), Query Frame = 1 Query: 214 MVIIFRFTFILFVFNVNCFIGDWQSFQSGYTIDQCYHIPDNFSLCRNVGYNRMVLPNYIQHESIEEAVQHSRVWMGLVNTQCHIDIRKFICSLYAPVCISSQRVQKVPPCRELCVTVKESCLPSMKMYGFDWPTIMKCSKFPQFQNSLCIPRTLVPEKNCDLCIKNPSYEVIANRFCLSPIVIRAKIKRIIPIGSKTMQIVLQKKSKFLKFFANFSQTDLNLRLKCNCTNLKFKQRALKGRWIIMAKVN-QNEAVVNFITKWKRKKAEFKHSMKIIQNFGHIVCKSKLPDGISLRERYAAYLXXXXXXXXXXXXXXXX-----QQTRRSKKPINTRSSSIS* 1221 M IF + +LF+ NVN FIGDWQ+FQSGYTIDQCY IPDNF+LC NVGY MVLPNYIQHESIEEA QHS+VWMGLVNTQCH+DI+KFICSLYAPVCIS+QR QKVPPCRELCVTVKESCLPSMKMYGFDWPTIMKCSKFPQF+NSLCIP+T+VP K CDLC+K SYEVIANRFCLSPIVIRAKIKRIIP +QI+LQKKSKFLKF ANFSQ L L LKCNCTNLKFKQRALKGRWIIMA+++ N+AVVNFI+KWKRKKAEFKHSMKIIQNFGHIVCKSKLPDGISLRERYAAYLKMNN++KYSN Q++R+S KP N RS+ IS* Sbjct: 3 MTKIFPLSLLLFISNVNSFIGDWQAFQSGYTIDQCYQIPDNFTLCSNVGYRLMVLPNYIQHESIEEAAQHSKVWMGLVNTQCHVDIKKFICSLYAPVCISNQRNQKVPPCRELCVTVKESCLPSMKMYGFDWPTIMKCSKFPQFKNSLCIPKTVVPGKKCDLCMKIASYEVIANRFCLSPIVIRAKIKRIIPTSGNAIQIILQKKSKFLKFQANFSQNALELNLKCNCTNLKFKQRALKGRWIIMAQIDSDNKAVVNFISKWKRKKAEFKHSMKIIQNFGHIVCKSKLPDGISLRERYAAYLKMNNQLKYSNERKLQTRKFRKQKSRKSVKP-NNRSAGIS* 343
BLAST of sfrp-1 vs. Smed Unigenes AA
Match: SMU15040524 (dd_smedV4_8832_0_1|m.39951|m.18186) HSP 1 Score: 187.578 bits (475), Expect = 1.385e-54 Identity = 106/281 (37.72%), Postives = 166/281 (59.07%), Query Frame = 1 Query: 271 IGDWQSFQSGYTIDQCYHIPDNFSLCRNVGYNRMVLPNYIQHESIEEAVQHSRVWMGLVNTQCHIDIRKFICSLYAPVCISSQRVQKVPPCRELCVTVKESCLPSMKMYGFDWPTIMKCSKFPQFQNSLCIPRT--LVPE-------KNCDLCIKNPSYEVIANRFCLSPIVIRAKIKRIIPIGSKTMQIVLQKKSKFLKFFANFSQTDL----NLRLKCNCTNLKFKQRALKGRWIIMAKVNQNEAVVNFITKWKRKKAEFKHSMKIIQNFGHIVCKSKL 1074 + +W + GY+ +C+ IP+ F LC+N+GYN+M+LPN++QHE+++EA+ S W + +CH D R+F+CSLYAPVC+ ++ V+K+ PC+ELC++VK++C P+M +G+ WP I+ C KFPQ LCI T VP K C+ C S I + +C S VIRAKI R+ + + L KKSK +K + TDL ++ + C C + KGRW++M VN + + +TKWK+K +FK ++ ++ F +C S+ Sbjct: 25 VPEWNNLIYGYSSHRCHEIPNEFGLCKNIGYNKMILPNFLQHETVQEAINSSIDWQKFADIKCHNDTRRFLCSLYAPVCVPNEPVRKIQPCKELCLSVKKACSPNMLTFGYKWPEILHCDKFPQKFAGLCIRGTEGAVPSGSSSVVPKGCN-CRSLYSAAFINDNYCSSTTVIRAKISRLRIRNNSKYVMRLHKKSKIIK----SNPTDLPFITSIEVSCLCDMID-NDNIRKGRWLLMGVVNDGKFTLTSLTKWKKKNKDFKKVIRKLKKFEEKICGSRF 299
BLAST of sfrp-1 vs. Smed Unigenes AA
Match: SMU15030883 (SmedSxlregen_c55322_g1_i1|m.6956|m.30359) HSP 1 Score: 159.844 bits (403), Expect = 7.597e-44 Identity = 89/303 (29.37%), Postives = 150/303 (49.50%), Query Frame = 1 Query: 268 FIGDWQSFQSGYTIDQCYHIPDNFSLCRNVG-YNRM-VLPNYIQHESIEEAVQHSRVWMGLVNTQCHIDIRKFICSLYAPVCISSQRVQKVPPCRELCVTVKESCLPSMKMYGFDWPTIMKCSKFPQFQNSLCIPRT-------------------------------LVPEKNCDLCIKNPSYEVIANRFCLSPIVIRAKIKRIIPIGSKTMQIVLQKKSKFLKFFA--NFSQTDLNLRLKCNCTNLKFKQRALKGRWIIMAKVNQNEAVVNFITKWKRKKAEFKHSMKIIQNFGHIVCKSK 1071 F D++ + ++QCY N +LC G N M +++ ++ S +W+ L++T+CH+D+ KF+C++YAP+C+ R +V PC ELC +VKE CLP +K+YGF+WP+I+ C KFP + CI T + +KNC +C + E++ FC +VIRAKI I + I LQ KS + S +L ++C C+ L+ + KG+W++ + + +V F+TKW+RK+ +F+ + + CK++ Sbjct: 17 FSVDFRVGANRQRLNQCYPKFANHTLCGGAGVLNSMKTFSGLLRNSKSGFSIYQSNIWIILLHTKCHVDLEKFLCTIYAPICLKGHRFTRVFPCEELCASVKEQCLPRLKIYGFEWPSIVDCGKFPLENKASCIQLTDGTGNYLKKSLVKKQREDRSLNQTILSDQEQTLQKKNCPICNRKVPLEILTKNFCKYSLVIRAKIANIFQKPKGAISIRLQHKSNIIHSSHPIRISLANLITEIQCKCSILQNAKSVSKGKWLLFGDIENGQFIVKFLTKWQRKRKKFRSLFRQLMKKPKFFCKNR 319
BLAST of sfrp-1 vs. Smed Unigenes AA
Match: SMU15001054 (Asxlregen_comp62015_c0_seq1|m.11130|m.22104) HSP 1 Score: 100.908 bits (250), Expect = 1.077e-22 Identity = 43/106 (40.57%), Postives = 63/106 (59.43%), Query Frame = 1 Query: 325 IPDNFSLCRNVGYNRMVLPNYIQHESIEEAVQHSRVWMGLVNTQCHIDIRKFICSLYAPVCISSQRVQKVPPCRELCVTVKESCLPSMKMYGFDWPTIMKCSKFPQ 642 IP S+C+ +GYN +PN + H S+EEA + + LV C D+R F+CS+YAP+C+ + ++P CR LC++ +E C M YGF WP M C K P+ Sbjct: 36 IPIEISMCKGIGYNLTYIPNDLNHASLEEAGLEIQQFNALVEINCSEDLRLFLCSMYAPICLPNWP-NRIPACRSLCISAREGCTRVMNQYGFKWPEGMNCEKLPE 140
BLAST of sfrp-1 vs. Smed Unigenes AA
Match: SMU15028068 (SmedSxldir_c94438_g1_i1|m.35603|m.6544) HSP 1 Score: 98.9821 bits (245), Expect = 5.429e-22 Identity = 45/113 (39.82%), Postives = 68/113 (60.18%), Query Frame = 1 Query: 343 LCRNVGYNRMVLPNYIQHESIEEAVQHSRVWMGLVNTQCHIDIRKFICSLYAPVCISSQRVQKVPPCRELCVTVKESCLPSMKMYGFDWPTIMKCSKFPQFQNS--LCIPRTL 675 LCR + YNR +PN HE+ EEA Q + +M LV +C D+ F+CS++ P+C+ + + +PPCR +C K+ C P M+ YGF WP M+C +FP+ LC+ R + Sbjct: 56 LCRGLWYNRTRMPNMFNHETQEEAGQQVQQFMYLVTVKCSPDLHFFLCSIFTPICVENYD-KPLPPCRSICQRSKDGCTPIMRRYGFSWPPQMECEQFPERSTDKQLCMERNI 167 The following BLAST results are available for this feature:
BLAST of sfrp-1 vs. RefSeq Human
Analysis Date: 2016-03-08 (Girardia Sp. BLASTX Human) Total hits: 5
BLAST of sfrp-1 vs. uniprot
Analysis Date: 2016-03-08 (Girardia Sp. BLASTX Swissprot Uniprot) Total hits: 5
BLAST of sfrp-1 vs. RefSeq Drosophila melanogaster
Analysis Date: 2016-03-09 (Girardia Sp. BLASTX Drosophila melanogaster) Total hits: 5
BLAST of sfrp-1 vs. Smed Unigenes AA
Analysis Date: 2016-03-09 (Girardia Sp. BLASTX Schmidtea mediterranea) Total hits: 5
Sequences
The following sequences are available for this feature:
mRNA sequence >Gsp_013592 ID=Gsp_013592|Name=sfrp-1|organism=Girardia sp.|type=mRNA|length=1317bp Design Primers for sfrp-1 back to top protein sequence >Gsp_013592-protein ID=Gsp_013592-protein|Name=sfrp-1|organism=Girardia sp.|type=polypeptide|length=336bpback to top coding sequence >Gsp_013592.214.1221 ID=Gsp_013592.214.1221|Name=Gsp_013592.214.1221|organism=Girardia sp.|type=CDS|length=1008bpback to top Gene Groups
sfrp-1 is similar in sequence to the genes of this group: GG7656
Gene Group Protein Sequences >SMU15001274 |