Overview
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of Gsp_005528 vs. uniprot
Match: gi|10720325|sp|O01393|UNC9_CAEEL (RecName: Full=Innexin unc-9; AltName: Full=Uncoordinated protein 9) HSP 1 Score: 217.238 bits (552), Expect = 3.083e-63 Identity = 133/391 (34.02%), Postives = 213/391 (54.48%), Query Frame = 2 Query: 131 MESLLTQF-SAFKVEKYVGIEDGADKASFLFSVAILVVCSIIISTKQYVATDISCYIPVVISGSDFEKFIRNYCWVHGTIPFRSNETLPQTKEEWMTAEYTKKINYYQWVPFVLGLQGILFYLPRLIWSTIVYNLSGNHLEGIVVSAQKATNQVGDSRKENIELIAKSLED-LFLQRRVLGHKKFPVLRQKMSLVCCGRRTGIFLVSLYFLIKILYLINAFGQILLMQNFLRLGTTKLNAAFGWTILQDIISGKQWTENLLFPRTTFCFVGDISLVAVKNHFVAQCTLPINMLNEKIYIFLWFWTVGVLILTIISIPIWLWRMTFFSKRQKFVKKFLKIKCSYSKVKHKELISHFVGRFLRHDGIFILHIISLNAGDLIATDIVTELWEIY 1297 M LL F SA K ++ +D DK ++ ++ AI+ V +I++S KQYV I C++P + E++ NYCWV T ++ +P E ++I YYQWVPFVL L+ +LFY+P ++W + + SG H++ +V A + +SR ++ IA ++E+ L ++ +V+ + +L +L+ C R +G + LY +KILY +N GQI L+ FL + +G +L D+++G++W E+ FPR T C L V H V QC L INM NEKI++FLWFW + T+ S+ W++ S++ FV K+L Y V + L FV FLR DG+F+L +++ +AG+L ++ LW Y Sbjct: 1 MSMLLYYFASAVKSIQFHVDDDIIDKLNYYYTTAIITVFAILVSAKQYVGFPIQCWVPATFT-EPMEQYTENYCWVQNTYFLPLHDYIPHNYAE----RENRQIGYYQWVPFVLALEALLFYVPTIVWRLLSWQ-SGIHVQSLVQMACDSRLLDLESRNRALQTIATNVEEALHVKHQVMSGNRLKLL----NLIICTRSSGAAVTFLYISVKILYTVNIVGQIFLLNTFL----GNRSKWYGLQVLNDLMNGREWEESGHFPRVTLCDFEVKVLGNVHRHTV-QCVLMINMFNEKIFLFLWFWYFLLAGATLCSLFYWIYISVVPSRQLNFVGKYLTGIEGYKMVDSQSL-RRFVFHFLRQDGVFLLRMVATHAGELPCYELAKTLWNNY 375
BLAST of Gsp_005528 vs. uniprot
Match: gi|418153|sp|Q03412|UNC7_CAEEL (RecName: Full=Innexin unc-7; AltName: Full=Uncoordinated protein 7) HSP 1 Score: 210.305 bits (534), Expect = 3.092e-59 Identity = 119/387 (30.75%), Postives = 209/387 (54.01%), Query Frame = 2 Query: 155 SAFKVEKYVGIEDGADKASFLFSVAILVVCSIIISTKQYVATDISCYIPVVISGSDFEKFIRNYCWVHGTIPFRSNETLPQTKEEWMTAEYTKKINYYQWVPFVLGLQGILFYLPRLIWSTIVYNLSGNHLEGIVVSAQKATNQVGDSRKENIELIAKSLEDLFLQRRV--LGHKKFPVLRQKMSLVCCGRRTGIFLVSLYFLIKILYLINAFGQILLMQNFLRLGTTKLNAAFGWTILQDIISGKQWTENLLFPRTTFCFVGDISLVAVKNHFVAQCTLPINMLNEKIYIFLWFWTVGVLILTIISIPIWLWRMTFFSKRQKFVKKFLKIKCSYS--KVKHKELISHFVGRFLRHDGIFILHIISLNAGDLIATDIVTELWEIYTK 1303 SAF+ +D DK ++ ++ IL ++++S KQYV I C++P + + E++ NYCWV T E +P+ + + ++I YYQWVPF+L ++ +LFY+P ++W ++Y SG +L+G+V A A + + + +A+ ++D + GH + ++ CGR G ++ LY IK+LY N Q L+ + LG+ L A+G+++L+D++ +W + +FPR T C L + H V QC L INM NEKI++FLWFW + I+T+ + W+ M S+ FV+K+L++ + + + F FLR DG+F+L +IS +AG+L++++++ LW+ + Sbjct: 128 SAFRALYPRLDDDFVDKLNYYYTTTILASFALLVSAKQYVGFPIQCWVPATFTDA-MEQYTENYCWVQNTYWVPMQEDIPRE----IYSRRNRQIGYYQWVPFILAIEALLFYVPCILWRGLLYWHSGINLQGLVQMACDARLMDSEIKTRTVYTMARHMQDEVQLTNIDRQGHSRSCFSNLQLG-ANCGRHCGCYVTMLYIGIKVLYSANVLLQFFLLNHL--LGSNDL--AYGFSLLKDLMHAIEWEQTGMFPRVTLCDFEVRVLGNIHRHTV-QCVLMINMFNEKIFLFLWFWFLTCGIVTVCNTMYWILIMFIPSQGMSFVRKYLRVLPDHPAKPIADDVTLRKFTNNFLRKDGVFMLRMISTHAGELMSSELILALWQDFNN 503
BLAST of Gsp_005528 vs. uniprot
Match: gi|12643734|sp|Q19746|INX3_CAEEL (RecName: Full=Innexin-3; AltName: Full=Protein opu-3) HSP 1 Score: 197.978 bits (502), Expect = 1.350e-55 Identity = 119/374 (31.82%), Postives = 196/374 (52.41%), Query Frame = 2 Query: 188 EDGADKASFLFSVAILVVCSIIISTKQYVATDISCYIPVVISGSDFEKFIRNYCWVHGT--IPFRSNETLPQTKEEWMTAEYTKKINYYQWVPFVLGLQGILFYLPRLIWSTIVYNLSGNHLEGIVVSAQKATNQVGDSRKENIELIAKSLEDLFLQRRVLGHKKFPVLRQKMSLVCCGRRTGIFLVSLYFLIKILYLINAFGQILLMQNFLRLGTTKLNAAF--GWTILQDIISGKQWTENLLFPRTTFCFVGDISLVAVKN--HFVAQCTLPINMLNEKIYIFLWFWTVGVLILTIISIPIWLWRMTFFSKRQKFVKKFLKIKCSYSKVKHKELISHFVGRFLRHDGIFILHIISLNAGDLIATDIVTELWE 1291 +D D+ S++ + +L SI++S KQYV + I C++P+ G +E++ +YC++ T IP RS +P E+ AE I YYQWVP VL +Q +FYLP IWS++ Y G ++ A+ +Q ++R + + + + D+ R + +F R G+ G LY IK++YL N F Q +++ FL N F G+ D+ +G++W ++ +FPR T C D S+ + N + QC L INM NEKIY+F+WFW V VLI T I+ ++R++F S R +++ L + K K +I+ F L+ DG+ ++ I +AG ++ +I EL++ Sbjct: 21 DDAVDRLSYVTTATLLAFFSIMVSCKQYVGSAIQCWMPMEFKGG-WEQYAEDYCFIQNTFFIPERSE--IPGDVEDRQKAE----IGYYQWVPIVLAIQAFMFYLPSWIWSSL-YKQCGLDFPSVISEAEALRSQDSETRTKGVNKLVDFIGDILDTRSKNEYGRFYCYR-------FGKGLGSMTSMLYICIKLMYLANVFVQFIILNKFLG------NETFLWGFHTFADLYAGREWQDSGVFPRVTLC---DFSVRKLANVHRYTVQCVLMINMFNEKIYLFIWFWFVFVLITTFINTLCTIYRLSFDSSRHNYIRSLLSGPVNNFK-DEKAMIASFANNGLKQDGVLLMRFIDDHAGAMVTKEICEELFK 369
BLAST of Gsp_005528 vs. uniprot
Match: gi|44889063|sp|Q23027|INX5_CAEEL (RecName: Full=Innexin-5; AltName: Full=Protein opu-5 [Caenorhabditis elegans]) HSP 1 Score: 187.578 bits (475), Expect = 1.640e-51 Identity = 121/399 (30.33%), Postives = 211/399 (52.88%), Query Frame = 2 Query: 164 KVEKYVGIEDGADKASFLFSVAILVVCSIIISTKQYVATDISCYIPVVISGSDFEKFIRNYCWVHGT--IP--FRSNETLPQTK-EEWMTAEYTKKINYYQWVPFVLGLQGILFYLPRLIWSTIVYN--LSGNHLEGIVVSAQKATNQVGDSRKENIELIAKSLEDLFLQRRVLGHKKFPVLRQKMSLVCCGRRTGIFLVSLYFLIKILYLINAFGQILLMQNFLRLGTTKLNAAFGWTILQDIISGKQWTENLLFPRTTFCFVGDISLVAVKNHFVAQCTLPINMLNEKIYIFLWFWTVGVLILTIISIPIWLWRMTFFSKRQKFVKKFLKIKCSYSKVKHKE--LISHFVGRFLRHDGIFILHIISLNAGDLIATDIVTELWEIYTKYYVEKDFSKN 1333 K ++ D AD+ S+ ++ +L +I+++ QYV I C++P + + +EK+ YC++ GT +P F S + T ++ +TA T ++ YYQW+P VL LQ LFYLP +IW T + L L + +++K + + D ++ A F ++ ++ PV ++ S+V G+ FL +LY L+KILYL N Q ++ FL TK + +GW QD+++G++W +FPR T C + L +V +H + QC + INML EK+Y+F WFW + V +LT+ S+ W S + F+ +L+ + + + + ++FV + L DG+FI ++ N+GDL + ++ E++ +Y EK K+ Sbjct: 11 KFQRSAESNDIADRFSYQYTSTLLGFSAIMMAASQYVGRPIQCWVPAQFTRT-WEKYAETYCFIKGTYFLPGAFASEGEMSVTSPDDAVTA--TPQVGYYQWIPIVLVLQAFLFYLPSIIWRTFNESCELKIKELAAVSEASRKIKSNMSDD-----QVKATKFGRYFFKKLNFRNES-PVFKETGSVVASGK----FLPALYLLVKILYLANIVLQFWILTYFLE---TK-SWMWGWQTFQDLMAGREWETTGIFPRVTMCDFSIMDLTSVHDHSI-QCVIVINMLAEKVYVFFWFWLLFVGLLTVCSLAYWAVIYMLQSVGRNFIYSYLQQTPEFQTEQERGSFVPANFVDKCLTPDGVFISRLVQQNSGDLFTSIMLGEMFSLYRAREAEKAHKKD 391
BLAST of Gsp_005528 vs. uniprot
Match: gi|10720052|sp|Q23157|INX11_CAEEL (RecName: Full=Innexin-11; AltName: Full=Protein opu-11) HSP 1 Score: 187.578 bits (475), Expect = 2.143e-51 Identity = 122/392 (31.12%), Postives = 203/392 (51.79%), Query Frame = 2 Query: 188 EDGADKASFLFSVAILVVCSIIISTKQYVATDISCYIPVVISGSDFEKFIRNYCWVHGTIPFRSNETLPQTKEEWMTAEYT--KKINYYQWVPFVLGLQGILFYLPRLIWSTIVYNLSGNHLEGIVVSAQKATNQVGDSRKENIELIAKSLEDLFLQRRVLGHKKFPVLRQKMSLVCCGRRTGIFLVSLYFLIKILYLINAFGQILLMQNFLRLGTTKLNAAFGWTILQDIISGKQWTENLLFPRTTFCFVGDISLVAVKNHFVAQCTLPINMLNEKIYIFLWFWTVGVLILTIISIPIWLWRMTFFSKRQKFVKKFLKIKC-----SYSKVKHKELISHFVGRFLRHDGIFILHIISLNAGDLIATDIVTELWEIYTKYYVEKDFSKNMVS 1342 +D +D+ ++L + IL+ S++IS KQ+ I C P GS +E++ NYCW T + + K+E YT ++++YYQWVPF L LQ F P +W N SG + +V A+ + N + R++NI ++ + L + + KK V + ++ + +G F+ +Y K+LY +N F Q+ LM FL GT + + +G+ ++QDI+ G+ W + FPR C ++ VA + QC L IN+ NEKI++ LWFW V +L+ + +S+ W + F + FVK+ L + + + +S FV ++L DG+F+L ++S +AG + ATD+V L+E Y KD + VS Sbjct: 20 DDWSDRLNYLMTPNILLAFSVLISFKQFGGRPIECMFPNKFPGS-WEQYAENYCWSQDTYFVEPTQDVSLLKKE---ERYTPDRQLSYYQWVPFFLLLQAAFFRAPSYLWKYFS-NHSGIRIHEVVEKAKDSANVEEEVREKNILILKRHLSSALRFQANMERKKVQV-HKTVTFLNFQYSSG-FISWIYLFTKVLYFLNVFAQLYLMNYFL--GTNR-HHWYGFGVVQDIVQGEPWERSGYFPRAAVCDF-EVRQVANIQRYSVQCVLVINIFNEKIFVLLWFWYVILLLSSTVSLVQWFIVLVFPCFSKWFVKQHLALSTLQNFNQRNSRREDSDVSKFVTQYLHKDGVFVLRMVSSHAGIIFATDLVQALYEAYDFQDKNKDVQGSPVS 400
BLAST of Gsp_005528 vs. RefSeq Drosophila melanogaster
Match: gi|18858897|ref|NP_572375.1| (innexin 2, isoform A [Drosophila melanogaster]) HSP 1 Score: 90.5077 bits (223), Expect = 2.033e-19 Identity = 91/386 (23.58%), Postives = 167/386 (43.26%), Query Frame = 2 Query: 179 VGIEDGADKASFLFSVAILVVCSIIISTKQYVATDISCYIPVVISGSDFEKFIRNYCWVHGT--IPFR------SNETLPQTKEEWMTAEYTKKINYYQWVPFVLGLQGILFYLPRLIWSTIVYNLSGNHLEGIVVSAQKA--TNQVGDSRKENIELIAKSLEDLFLQRRVLGHKKFPVLRQKMSLVCCGRRTGIFLVSLYFLIKILYLINAFGQILLMQNFLRLGTTKLNAAFGWTILQDIISGKQWTENL-----LFPRTTFCFVGDISLVAVKNHFVAQCTLPINMLNEKIYIFLWFWTVGVLILTIISIPIWLWRMTFFSKRQKFVKKFLKIKCSYSKVKHKELISH--FVGRFLRHDGIFILHIISLNAGDLIATDIVTEL 1285 V I++ + + +V IL+ S++++++QY+ I C + + G + YCW++ T +P R + P + K YYQWV FVL Q ILFY+PR +W + G L+ +V+ ++ + RK K L D F+ L F R +F+ + L +N GQI + FL + +G +L+ + + E + +FP+ T C C LP+N++NEKIY+FLWFW + + I++ IS+ ++R+ + K L+ + ++ + EL+++ +G + F+L+ + N LI +++++L Sbjct: 17 VCIDNNVFRMHYKATVIILIAFSLLVTSRQYIGDPIDCIVDEIPLG-----VMDTYCWIYSTFTVPERLTGITGRDVVQPGVGSHVEGEDEVKYHKYYQWVCFVLFFQAILFYVPRYLWKS----WEGGRLKMLVMDLNSPIVNDECKNDRK-------KILVDYFIGN--LNRHNFYAFR-------------------FFVCEALNFVNVIGQIYFVDFFL----DGEFSTYGSDVLK--FTELEPDERIDPMARVFPKVTKCTFHKYGPSGSVQTHDGLCVLPLNIVNEKIYVFLWFWFIILSIMSGISL---IYRIAVVAG-PKLRHLLLRARSRLAESEEVELVANKCNIGDW------FLLYQLGKNIDPLIYKEVISDL 349
BLAST of Gsp_005528 vs. RefSeq Drosophila melanogaster
Match: gi|24640280|ref|NP_727150.1| (innexin 2, isoform B [Drosophila melanogaster]) HSP 1 Score: 90.5077 bits (223), Expect = 2.033e-19 Identity = 91/386 (23.58%), Postives = 167/386 (43.26%), Query Frame = 2 Query: 179 VGIEDGADKASFLFSVAILVVCSIIISTKQYVATDISCYIPVVISGSDFEKFIRNYCWVHGT--IPFR------SNETLPQTKEEWMTAEYTKKINYYQWVPFVLGLQGILFYLPRLIWSTIVYNLSGNHLEGIVVSAQKA--TNQVGDSRKENIELIAKSLEDLFLQRRVLGHKKFPVLRQKMSLVCCGRRTGIFLVSLYFLIKILYLINAFGQILLMQNFLRLGTTKLNAAFGWTILQDIISGKQWTENL-----LFPRTTFCFVGDISLVAVKNHFVAQCTLPINMLNEKIYIFLWFWTVGVLILTIISIPIWLWRMTFFSKRQKFVKKFLKIKCSYSKVKHKELISH--FVGRFLRHDGIFILHIISLNAGDLIATDIVTEL 1285 V I++ + + +V IL+ S++++++QY+ I C + + G + YCW++ T +P R + P + K YYQWV FVL Q ILFY+PR +W + G L+ +V+ ++ + RK K L D F+ L F R +F+ + L +N GQI + FL + +G +L+ + + E + +FP+ T C C LP+N++NEKIY+FLWFW + + I++ IS+ ++R+ + K L+ + ++ + EL+++ +G + F+L+ + N LI +++++L Sbjct: 17 VCIDNNVFRMHYKATVIILIAFSLLVTSRQYIGDPIDCIVDEIPLG-----VMDTYCWIYSTFTVPERLTGITGRDVVQPGVGSHVEGEDEVKYHKYYQWVCFVLFFQAILFYVPRYLWKS----WEGGRLKMLVMDLNSPIVNDECKNDRK-------KILVDYFIGN--LNRHNFYAFR-------------------FFVCEALNFVNVIGQIYFVDFFL----DGEFSTYGSDVLK--FTELEPDERIDPMARVFPKVTKCTFHKYGPSGSVQTHDGLCVLPLNIVNEKIYVFLWFWFIILSIMSGISL---IYRIAVVAG-PKLRHLLLRARSRLAESEEVELVANKCNIGDW------FLLYQLGKNIDPLIYKEVISDL 349
BLAST of Gsp_005528 vs. RefSeq Drosophila melanogaster
Match: gi|281359964|ref|NP_001162684.1| (innexin 2, isoform C [Drosophila melanogaster]) HSP 1 Score: 90.5077 bits (223), Expect = 2.033e-19 Identity = 91/386 (23.58%), Postives = 167/386 (43.26%), Query Frame = 2 Query: 179 VGIEDGADKASFLFSVAILVVCSIIISTKQYVATDISCYIPVVISGSDFEKFIRNYCWVHGT--IPFR------SNETLPQTKEEWMTAEYTKKINYYQWVPFVLGLQGILFYLPRLIWSTIVYNLSGNHLEGIVVSAQKA--TNQVGDSRKENIELIAKSLEDLFLQRRVLGHKKFPVLRQKMSLVCCGRRTGIFLVSLYFLIKILYLINAFGQILLMQNFLRLGTTKLNAAFGWTILQDIISGKQWTENL-----LFPRTTFCFVGDISLVAVKNHFVAQCTLPINMLNEKIYIFLWFWTVGVLILTIISIPIWLWRMTFFSKRQKFVKKFLKIKCSYSKVKHKELISH--FVGRFLRHDGIFILHIISLNAGDLIATDIVTEL 1285 V I++ + + +V IL+ S++++++QY+ I C + + G + YCW++ T +P R + P + K YYQWV FVL Q ILFY+PR +W + G L+ +V+ ++ + RK K L D F+ L F R +F+ + L +N GQI + FL + +G +L+ + + E + +FP+ T C C LP+N++NEKIY+FLWFW + + I++ IS+ ++R+ + K L+ + ++ + EL+++ +G + F+L+ + N LI +++++L Sbjct: 17 VCIDNNVFRMHYKATVIILIAFSLLVTSRQYIGDPIDCIVDEIPLG-----VMDTYCWIYSTFTVPERLTGITGRDVVQPGVGSHVEGEDEVKYHKYYQWVCFVLFFQAILFYVPRYLWKS----WEGGRLKMLVMDLNSPIVNDECKNDRK-------KILVDYFIGN--LNRHNFYAFR-------------------FFVCEALNFVNVIGQIYFVDFFL----DGEFSTYGSDVLK--FTELEPDERIDPMARVFPKVTKCTFHKYGPSGSVQTHDGLCVLPLNIVNEKIYVFLWFWFIILSIMSGISL---IYRIAVVAG-PKLRHLLLRARSRLAESEEVELVANKCNIGDW------FLLYQLGKNIDPLIYKEVISDL 349
BLAST of Gsp_005528 vs. RefSeq Drosophila melanogaster
Match: gi|442615370|ref|NP_001259301.1| (innexin 2, isoform D [Drosophila melanogaster]) HSP 1 Score: 90.5077 bits (223), Expect = 2.033e-19 Identity = 91/386 (23.58%), Postives = 167/386 (43.26%), Query Frame = 2 Query: 179 VGIEDGADKASFLFSVAILVVCSIIISTKQYVATDISCYIPVVISGSDFEKFIRNYCWVHGT--IPFR------SNETLPQTKEEWMTAEYTKKINYYQWVPFVLGLQGILFYLPRLIWSTIVYNLSGNHLEGIVVSAQKA--TNQVGDSRKENIELIAKSLEDLFLQRRVLGHKKFPVLRQKMSLVCCGRRTGIFLVSLYFLIKILYLINAFGQILLMQNFLRLGTTKLNAAFGWTILQDIISGKQWTENL-----LFPRTTFCFVGDISLVAVKNHFVAQCTLPINMLNEKIYIFLWFWTVGVLILTIISIPIWLWRMTFFSKRQKFVKKFLKIKCSYSKVKHKELISH--FVGRFLRHDGIFILHIISLNAGDLIATDIVTEL 1285 V I++ + + +V IL+ S++++++QY+ I C + + G + YCW++ T +P R + P + K YYQWV FVL Q ILFY+PR +W + G L+ +V+ ++ + RK K L D F+ L F R +F+ + L +N GQI + FL + +G +L+ + + E + +FP+ T C C LP+N++NEKIY+FLWFW + + I++ IS+ ++R+ + K L+ + ++ + EL+++ +G + F+L+ + N LI +++++L Sbjct: 17 VCIDNNVFRMHYKATVIILIAFSLLVTSRQYIGDPIDCIVDEIPLG-----VMDTYCWIYSTFTVPERLTGITGRDVVQPGVGSHVEGEDEVKYHKYYQWVCFVLFFQAILFYVPRYLWKS----WEGGRLKMLVMDLNSPIVNDECKNDRK-------KILVDYFIGN--LNRHNFYAFR-------------------FFVCEALNFVNVIGQIYFVDFFL----DGEFSTYGSDVLK--FTELEPDERIDPMARVFPKVTKCTFHKYGPSGSVQTHDGLCVLPLNIVNEKIYVFLWFWFIILSIMSGISL---IYRIAVVAG-PKLRHLLLRARSRLAESEEVELVANKCNIGDW------FLLYQLGKNIDPLIYKEVISDL 349
BLAST of Gsp_005528 vs. RefSeq Drosophila melanogaster
Match: gi|17864458|ref|NP_524824.1| (optic ganglion reduced, isoform A [Drosophila melanogaster]) HSP 1 Score: 87.8113 bits (216), Expect = 1.485e-18 Identity = 74/282 (26.24%), Postives = 116/282 (41.13%), Query Frame = 2 Query: 218 FSVAILVVCSIIISTKQYVATDISCYIPVVISGSDFEKFIRNYCWVHGTI----PFRSNE----TLPQTKEEWMTAEYTKKINYYQWVPFVLGLQGILFYLPRLIWSTIVYNLSGNHLEGIVVSAQKATNQVGDSRKENIELIAKSLEDLFLQRRVLGHKKFPVLRQKMSLVCCGRRTGIFLVSLYFLIKILYLINAFGQILLMQNFLRLGTTKLNAAFGWTILQDIISGKQWTENL-LFPRTTFCFVGDISLVAVKNHFVAQCTLPINMLNEKIYIFLWFW 1036 F+ +L+ CS+II+ QYV ISC +++G + +CW+H T FR P ++ + K YYQWV FVL Q + Y P+ +W N EG ++ + +E E +L D +L + V HK + + +CC +I +YL+N F FL GT + L D+ ++ + +FPR T C + C LP+N++NEK Y+F+WFW Sbjct: 30 FTTVLLLTCSLIITATQYVGQPISC----IVNGVP-PHVVNTFCWIHSTFTMPDAFRRQVGREVAHPGVANDFGDEDAKKYYTYYQWVCFVLFFQAMACYTPKFLW---------NKFEGGLMRMIVMGLNITICTREEKEAKRDALLD-YLIKHVKRHKLYAIRYWACEFLCCIN-----------IIVQMYLMNRF----FDGEFLSYGTNIMK-------LSDVPQEQRVDPMVYVFPRVTKCTFHKYGPSGSLQKHDSLCILPLNIVNEKTYVFIWFW 274
BLAST of Gsp_005528 vs. Smed Unigenes AA
Match: SMU15003648 (SmedAsxldir_c102510_g2_i1|m.54901|m.45535) HSP 1 Score: 668.307 bits (1723), Expect = 0.000e+0 Identity = 312/416 (75.00%), Postives = 366/416 (87.98%), Query Frame = 2 Query: 131 MESLLTQFSAFKVEKYVGIEDGADKASFLFSVAILVVCSIIISTKQYVATDISCYIPVVISGSDFEKFIRNYCWVHGTIPFRSNETLPQTKEEWMTAEYTKKINYYQWVPFVLGLQGILFYLPRLIWSTIVYNLSGNHLEGIVVSAQKATNQVGDSRKENIELIAKSLEDLFLQRRVLGHKKFPVLRQKMSLVCCGRRTGIFLVSLYFLIKILYLINAFGQILLMQNFLRLGTTKLNAAFGWTILQDIISGKQWTENLLFPRTTFCFVGDISLVAVKNHFVAQCTLPINMLNEKIYIFLWFWTVGVLILTIISIPIWLWRMTFFSKRQKFVKKFLKIKCSYSKVKHKELISHFVGRFLRHDGIFILHIISLNAGDLIATDIVTELWEIYTKYYVEKDFSKNMVSIADEKTKQTFV* 1378 ME+ L+QF+AF+ KYVGIED ADKASFLFSV ILVVCS+I+STKQY+ DISCYIPVV+SG D +K+++NYCWVHGTIPF +NETLPQTK+EW+ A+ ++KINYYQWVPFVLGLQG+LFYLPRLIW TI+YNLSGN LEG+VVSA+KA+NQVG+ RKE I +AK LEDLFLQRRVLGH KFPVLRQKMSL+CCGRRTG+F +SLY +IK+LYL NA QI+LMQNFL+ G +KLNAAFGWTIL+DI+SGKQW +NLLFPR +FCF+ DIS V KNH +AQC LPINMLNEKIYIFLWFWTVGVL LTIISIP+WL+RMTFF KR+ F+K+FLKIK +Y+K K K LIS FV +FLRHDGIFILHIISLNAGDLIATDIV+ELWEIY KYY++ DF K +S ++EK+KQTFV* Sbjct: 1 METFLSQFTAFQAGKYVGIEDAADKASFLFSVIILVVCSVIVSTKQYITADISCYIPVVLSGVDLDKYVKNYCWVHGTIPFYANETLPQTKDEWIIADASRKINYYQWVPFVLGLQGVLFYLPRLIWKTIIYNLSGNDLEGLVVSAKKASNQVGEIRKETILQVAKCLEDLFLQRRVLGHTKFPVLRQKMSLICCGRRTGVFFISLYIVIKLLYLTNAICQIILMQNFLKYGVSKLNAAFGWTILKDILSGKQWNDNLLFPRVSFCFISDISTVTHKNHHIAQCALPINMLNEKIYIFLWFWTVGVLFLTIISIPLWLYRMTFFRKRKDFIKRFLKIKSAYTKDK-KNLISQFVEQFLRHDGIFILHIISLNAGDLIATDIVSELWEIYNKYYLKIDFRKKYISSSNEKSKQTFV* 415
BLAST of Gsp_005528 vs. Smed Unigenes AA
Match: SMU15003649 (SmedAsxldir_c102510_g2_i2|m.54904|m.29219) HSP 1 Score: 655.21 bits (1689), Expect = 0.000e+0 Identity = 304/416 (73.08%), Postives = 362/416 (87.02%), Query Frame = 2 Query: 131 MESLLTQFSAFKVEKYVGIEDGADKASFLFSVAILVVCSIIISTKQYVATDISCYIPVVISGSDFEKFIRNYCWVHGTIPFRSNETLPQTKEEWMTAEYTKKINYYQWVPFVLGLQGILFYLPRLIWSTIVYNLSGNHLEGIVVSAQKATNQVGDSRKENIELIAKSLEDLFLQRRVLGHKKFPVLRQKMSLVCCGRRTGIFLVSLYFLIKILYLINAFGQILLMQNFLRLGTTKLNAAFGWTILQDIISGKQWTENLLFPRTTFCFVGDISLVAVKNHFVAQCTLPINMLNEKIYIFLWFWTVGVLILTIISIPIWLWRMTFFSKRQKFVKKFLKIKCSYSKVKHKELISHFVGRFLRHDGIFILHIISLNAGDLIATDIVTELWEIYTKYYVEKDFSKNMVSIADEKTKQTFV* 1378 MESL+ +FS F VEKYVG+EDGADKASFLFSV ILVVC++I+STKQY+ +I+CYIP++ +G E +I+NYCW HGTIPFR NETLPQ +++WM A++ +++NYYQWVPFVLGLQG+LFYLPRLIW TI+YNLSGN LEG+VVSA+KA+NQVG+ RKE I +AK LEDLFLQRRVLGH KFPVLRQKMSL+CCGRRTG+F +SLY +IK+LYL NA QI+LMQNFL+ G +KLNAAFGWTIL+DI+SGKQW +NLLFPR +FCF+ DIS V KNH +AQC LPINMLNEKIYIFLWFWTVGVL LTIISIP+WL+RMTFF KR+ F+K+FLKIK +Y+K K K LIS FV +FLRHDGIFILHIISLNAGDLIATDIV+ELWEIY KYY++ DF K +S ++EK+KQTFV* Sbjct: 1 MESLIGEFSNFNVEKYVGVEDGADKASFLFSVVILVVCTVIVSTKQYIFGEIACYIPILNTGEKLEDYIQNYCWAHGTIPFRENETLPQNRKDWMQADFDRRLNYYQWVPFVLGLQGVLFYLPRLIWKTIIYNLSGNDLEGLVVSAKKASNQVGEIRKETILQVAKCLEDLFLQRRVLGHTKFPVLRQKMSLICCGRRTGVFFISLYIVIKLLYLTNAICQIILMQNFLKYGVSKLNAAFGWTILKDILSGKQWNDNLLFPRVSFCFISDISTVTHKNHHIAQCALPINMLNEKIYIFLWFWTVGVLFLTIISIPLWLYRMTFFRKRKDFIKRFLKIKSAYTKDK-KNLISQFVEQFLRHDGIFILHIISLNAGDLIATDIVSELWEIYNKYYLKIDFRKKYISSSNEKSKQTFV* 415
BLAST of Gsp_005528 vs. Smed Unigenes AA
Match: SMU15000837 (Asxlregen_comp60104_c0_seq1|m.8709|m.29256) HSP 1 Score: 396.356 bits (1017), Expect = 1.507e-132 Identity = 189/401 (47.13%), Postives = 264/401 (65.84%), Query Frame = 2 Query: 134 ESLLTQFSAFKVEKYVGIEDGADKASFLFSVAILVVCSIIISTKQYVATDISCYIPVVISGSDFEKFIRNYCWVHGTIPFRSNETLPQTKEEWMTAEYTKKINYYQWVPFVLGLQGILFYLPRLIWSTIVYNLSGNHLEGIVVSAQKATNQVGDSRKENIELIAKSLEDLFLQRRVLGHKKFPVLRQKMSLVC--C--GRRTGIFLVSLYFLIKILYLINAFGQILLMQNFLRLGTTKLNAAFGWTILQDIISGKQWTENLLFPRTTFCFVGDISLVAVKNHFVAQCTLPINMLNEKIYIFLWFWTVGVLILTIISIPIWLWRMTFFSKRQKFVKKFLKIKCSYSKVKHKELISHFVGRFLRHDGIFILHIISLNAGDLIATDIVTELWEIYTKYYVEKDF 1324 E L FK+ YVGIED ADK SFLFSV +L++ ++++ K Y+ ++CY GS+FE ++ NYCWVHGTI F E +PQ +W A+ T++INYYQWVPF+LGLQ I+FY+P++IW I YN SG +LE IV A A N RK+ IE IA+++ED+ Q R F LR+K+ C C + G +L+ Y LIK LY +N GQ+ +M+ FL T ++FG+T+L ++ISGK+W + +FPR T+C+V +I V V N +VAQC LP+NMLNEKIY+FLWFW V V I+T ISIP+W +RM F S+R KF+K+FL + +Y + K +I++F+ FLRHDG+F++ ++ +NAGD+I DIV L EIY + Y DF Sbjct: 4 EEFLNLIGQFKISTYVGIEDFADKLSFLFSVTLLILSMMVVTIKSYLFKPLACYTATAPGGSNFENYLENYCWVHGTITFLPGEDIPQNDVDWARADDTRRINYYQWVPFILGLQCIMFYIPKIIWQIICYNKSGTNLESIVNDANAANNTPPVERKDKIERIARTIEDMLFQHRDYRQGNFAKLRRKVYNTCNFCVFSKHMGTWLILSYILIKFLYGLNVIGQLFIMKKFLGFNNT--TSSFGYTVLSNMISGKEWHQTGIFPRVTYCYVRNIKHVGVANKYVAQCALPVNMLNEKIYVFLWFWMVLVGIVTAISIPLWFYRMAFLSRRSKFIKRFLMMHQNYER-SDKPMINNFIEEFLRHDGVFLVRMLFINAGDIITADIVNRLLEIYKENYKHLDF 401
BLAST of Gsp_005528 vs. Smed Unigenes AA
Match: SMU15000918 (Asxlregen_comp60865_c0_seq1|m.9650|m.1056) HSP 1 Score: 384.415 bits (986), Expect = 3.424e-128 Identity = 196/403 (48.64%), Postives = 274/403 (67.99%), Query Frame = 2 Query: 155 SAFKVEKYVGIEDGADKASFLFSVAILVVCSIIISTKQYVATDISCYIPVVISGSDFEKFIRNYCWVHGTIPFRSNETLPQTKEEWMTAEYTKKINYYQWVPFVLGLQGILFYLPRLIWSTIVYNLSGNHLEGIVVSAQKATNQVGDSRKENIELIAKSLEDLFLQRRVLGHKKFPVLRQ---KMSLVCCGRRTGIFLVSLYFLIKILYLINAFGQILLMQNFLRLGTTKLNAAFGWTILQDIISGKQWTENLLFPRTTFCFVGDISLVAVKNHFVAQCTLPINMLNEKIYIFLWFWTVGVLILTIISIPIWLWRMTFFSKRQKFVKKFLKIKCSYSKVKHKELISHFVGRFLRHDGIFILHIISLNAGDLIATDIVTELWEIYTKYYVEKDFSKNMVSIADE 1354 + +K +VG+ED ADK SF S +IL++ +++I+ K Y+ T I+CYIP+ SG DF+ F+++YCWVHGTIP + N LP E W + +INYYQWVPFVL LQGILFYLPR+IW I YNLSG LEG+V A A+NQ G ++ E ++ IA +LE+L R + P++ + S +C +R+G L + Y IK+LY+INAFGQ+ LMQ FL G +FG+ +L++I+ G++W + ++FPR T+C++ +I VA+KN+++AQC LPINMLNEKIYIFLWFWTV V+ T IS+ W++R+T S + F+KKFL+I+ Y+ L S F G FLR DG+FIL + S+NAGDLI DIVT LW IY + + E++FSK+ V DE Sbjct: 11 TKYKWADFVGMEDFADKLSFSISTSILLLLTLVITVKSYLLTSIACYIPIHPSGKDFDDFLKSYCWVHGTIPIKGN--LPPDIESWEKMDEFNRINYYQWVPFVLALQGILFYLPRIIWQMITYNLSGTDLEGLVEMANSASNQTGKAKSETVDQIAMNLENLLFSHRKINLHSKPIMSKLSTAKSWLCSDKRSGRQLAAQYMFIKVLYVINAFGQLFLMQYFLDFGHK--GTSFGYVVLKNILEGREWNDTMIFPRVTYCYLKNIQHVAIKNNYLAQCVLPINMLNEKIYIFLWFWTVIVVFFTFISLFQWIYRLTQSSSQVHFLKKFLRIREQYTDEDCSVLKSFFRG-FLRKDGVFILRMFSINAGDLITADIVTGLWNIYKEKHKEENFSKSGVP-GDE 407
BLAST of Gsp_005528 vs. Smed Unigenes AA
Match: SMU15000657 (Asxlregen_comp58174_c0_seq1|m.6943|m.8923) HSP 1 Score: 363.999 bits (933), Expect = 3.974e-120 Identity = 176/403 (43.67%), Postives = 256/403 (63.52%), Query Frame = 2 Query: 134 ESLLTQFSAFKVEKYVGIEDGADKASFLFSVAILVVCSIIISTKQYVATDISCYIPVVISGSDFEKFIRNYCWVHGTIPFRSNETLPQTKEEWMTAEYTKKINYYQWVPFVLGLQGILFYLPRLIWSTIVYNLSGNHLEGIVVSAQKATNQVGDSRKENIELIAKSLEDLFLQRRVLGHKKFPVLRQKMSLVC--C--GRRTGIFLVSLYFLIKILYLINAFGQILLMQNFLRLGTTKLNAAFGWTILQDIISGKQWTENLLFPRTTFCFVGDISLVAVKNHFVAQCTLPINMLNEKIYIFLWFWTVGVLILTIISIPIWLWRMTFFSKRQKFVKKFLKIKCSYSKVKHKELISHFVGRFLRHDGIFILHIISLNAGDLIATDIVTELWEIYTKYYVEKDFSK 1330 + L+ FK+ Y G+ED AD+ +F+FSV IL + +I++ K Y +SCY+ SG +F+ ++ NYCWVHGTIPF NE +P E+W + K+I YYQWVPF+LGLQ ILFY+P+L+W I YN G +LE ++ +A ++ RK + I + +EDL Q R K R+++ C C + G +LVS YF IK LY IN GQ+ LM++FL ++ ++FG+TIL DIISGK W E FPR ++C+ DI + N +VAQCTLP+NMLNEKIYIFLWFW + V I+T++SI W+ R+ F SKR F KK LK+ SY + ++ ++HF+ +LR+DG+F++ +I +N+GD++A +I+ LWE Y Y+ DF+ Sbjct: 4 QEFLSLIDQFKLSSYAGLEDFADRLNFIFSVVILSLSMVIVTAKAYFFKPLSCYVATTPSGMNFDGYMENYCWVHGTIPFLENERIPDKPEDWAIWDADKRITYYQWVPFILGLQCILFYIPKLLWEIICYNKLGTNLETLITAATDSSKLPPSERKSVLNNIVRIIEDLLYQHRDYRQGKMAKARRRIYEYCNFCVFSKHLGTWLVSTYFFIKCLYGINVIGQLYLMKSFLGFNSSM--SSFGYTILNDIISGKSWHETRNFPRVSYCYNADIKHLGAVNTYVAQCTLPVNMLNEKIYIFLWFWVLLVGIITLLSILQWVVRIVFLSKRSMFAKKLLKMHQSYQRSENLT-VNHFIKEYLRYDGLFLIRMIYINSGDIVAAEILNGLWETYKNKYINHDFTN 403 The following BLAST results are available for this feature:
BLAST of Gsp_005528 vs. RefSeq Human
Analysis Date: 2016-03-08 (Girardia Sp. BLASTX Human) Total hits: 0
BLAST of Gsp_005528 vs. uniprot
Analysis Date: 2016-03-08 (Girardia Sp. BLASTX Swissprot Uniprot) Total hits: 5
BLAST of Gsp_005528 vs. RefSeq Drosophila melanogaster
Analysis Date: 2016-03-09 (Girardia Sp. BLASTX Drosophila melanogaster) Total hits: 5
BLAST of Gsp_005528 vs. Smed Unigenes AA
Analysis Date: 2016-03-09 (Girardia Sp. BLASTX Schmidtea mediterranea) Total hits: 5
Sequences
The following sequences are available for this feature:
mRNA sequence >Gsp_005528 ID=Gsp_005528|Name=Gsp_005528|organism=Girardia sp.|type=mRNA|length=1558bp Design Primers for Gsp_005528 back to top protein sequence >Gsp_005528-protein ID=Gsp_005528-protein|Name=Gsp_005528|organism=Girardia sp.|type=polypeptide|length=416bpback to top coding sequence >Gsp_005528.131.1378 ID=Gsp_005528.131.1378|Name=Gsp_005528.131.1378|organism=Girardia sp.|type=CDS|length=1248bpback to top Gene Groups
Gsp_005528 is similar in sequence to the genes of this group: GG549
Gene Group Protein Sequences >SMU15000918 |