collagen, Ddo_024746 (mRNA) Dugesia dorotocephala
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Overview
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Homology
BLAST of collagen vs. uniprot
Match: gi|8134352|sp|O46392|CO1A2_CANFA (RecName: Full=Collagen alpha-2(I) chain; AltName: Full=Alpha-2 type I collagen; Flags: Precursor) HSP 1 Score: 145.206 bits (365), Expect = 4.781e-33 Identity = 70/224 (31.25%), Postives = 120/224 (53.57%), Query Frame = 1
Query: 8155 NNAIKN---PQGTKEVPARTCKHLSSVNPQAPDGEYWIDPNGGRIEDAVKVYCKISEQKTCIKSIDNNLSIRSW--NSPILNGPTWLQKLIN-KNEIQYSVPN-------NQLAFLKVYSDNAVQRVTFNCENHPIIGNEKIFNKVTAPRLLADDD-SIIKMTHPKLKYSVIKDECQYSKSSEAESVIEVK-DVANLLPIRDVGIHIINNRKSKFGLTIEDVCF 8781
NN I+ P+G+++ PARTC+ L +P+ G YWIDPN G DA+KVYC S +TCI++ N+ ++W NS + WL + IN + +Y+V QLAF+++ +++A Q +T++C+N +E+ N A L +D ++ + + Y+V+ D C + +++IE K + + LPI D+ I + +F + + VCF
Sbjct: 1143 NNQIETLLTPEGSRKNPARTCRDLRLSHPEWSSGYYWIDPNQGCTMDAIKVYCDFSTGETCIRAQPENIPAKNWYRNSKVKKH-IWLGETINGGTQFEYNVEGVTTKEMATQLAFMRLLANHASQNITYHCKNSIAYMDEETGNLKKAVILQGSNDVELVAEGNSRFTYTVLVDGCSKKTNEWRKTIIEYKTNKPSRLPILDIAPLDIGDADQEFRVDVGPVCF 1365 HSP 2 Score: 145.206 bits (365), Expect = 4.781e-33 Identity = 70/224 (31.25%), Postives = 120/224 (53.57%), Query Frame = -1
Query: 412 NNAIKN---PQGTKEVPARTCKHLSSVNPQAPDGEYWIDPNGGRIEDAVKVYCKISEQKTCIKSIDNNLSIRSW--NSPILNGPTWLQKLIN-KNEIQYSVPN-------NQLAFLKVYSDNAVQRVTFNCENHPIIGNEKIFNKVTAPRLLADDD-SIIKMTHPKLKYSVIKDECQYSKSSEAESVIEVK-DVANLLPIRDVGIHIINNRKSKFGLTIEDVCF 1038
NN I+ P+G+++ PARTC+ L +P+ G YWIDPN G DA+KVYC S +TCI++ N+ ++W NS + WL + IN + +Y+V QLAF+++ +++A Q +T++C+N +E+ N A L +D ++ + + Y+V+ D C + +++IE K + + LPI D+ I + +F + + VCF
Sbjct: 1143 NNQIETLLTPEGSRKNPARTCRDLRLSHPEWSSGYYWIDPNQGCTMDAIKVYCDFSTGETCIRAQPENIPAKNWYRNSKVKKH-IWLGETINGGTQFEYNVEGVTTKEMATQLAFMRLLANHASQNITYHCKNSIAYMDEETGNLKKAVILQGSNDVELVAEGNSRFTYTVLVDGCSKKTNEWRKTIIEYKTNKPSRLPILDIAPLDIGDADQEFRVDVGPVCF 1365 HSP 3 Score: 61.6178 bits (148), Expect = 1.376e-7 Identity = 144/373 (38.61%), Postives = 170/373 (45.58%), Query Frame = 1
Query: 5197 GVTGPPGARGEQGPAGPVGKEGLSGAPGFVGPTGEKGDTGPPGEQGDLGDIXXXXXXXXXXXXXXXXXXXXXXNVGERGPVGPDGMIGPPGPEGKIGSPGSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDGKSGKPGTRGPIGPVGINGRPGKKGELGDIGLTGPQGISGPRGKRGRVGNPGEGGPKGSQGDQGPIGLEGRAGVLGPKGQKGDXXXXXXXXXXXXXXXXXXXXXDGVKGSRGESGPNGAPGDPGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVGPNGPDGKSGNKGAIGPTGQPGVRGSIGNPGKDGAL---------GPMGTSGMRGPPGNIGVEGSKGNKGPPG 6288
G G PG +GE G G G G +GA G G G G GP G +G G +GP G AGPIG G G G G GE GPVG G GP GP G++G PG G VG G G G+ G KG AG G+ G G PG RG GPVG G G +G +G+ G G +G SG +G+ G G G GP G +G +GP G G AG GP G +G G G G DG G G GP GA G G+ GPNG G+ G G +GP G PG G++G GK+G + GP+G +G RG PGNIG G KG G PG
Sbjct: 190 GQPGAPGVKGEPGAPGENGTPGQTGARGLPGERGRVGAPGPAGARGSDGSVGPVGPAGPIGSAGPPGFPGAPGPKGEIGPVGNPGPAGPAGPRGEVGLPGV---SGPVGPPGNPGANGLTGAKGAAGLPGVAGAPGLPGPRGIPGPVGAAGATGARGIVGEPGPAGSKGESGNKGEPGSAGAQGPPGPSGEEGKRGPNGEAGSAGPSGPPGLRGSPGSRGLPGA------------DGPAGVMGPPGPRGATGPAGVR------------------------------------------GPNGDSGRPGEPGLMGPRGFPGAPGNVGPAGKEGPMGLPGIDGRPGPIGPAGARGEPGNIGFPGPKGPTGDPG 505 HSP 4 Score: 61.6178 bits (148), Expect = 1.376e-7 Identity = 144/373 (38.61%), Postives = 170/373 (45.58%), Query Frame = -1
Query: 2905 GVTGPPGARGEQGPAGPVGKEGLSGAPGFVGPTGEKGDTGPPGEQGDLGDIXXXXXXXXXXXXXXXXXXXXXGNVGERGPVGPDGMIGPPGPEGKIGSPGSPXXXXXXXXXXXXXXXXXXXXXXXXXXXGLDGKSGKPGTRGPIGPVGINGRPGKKGELGDIGLTGPQGISGPRGKRGRVGNPGEGGPKGSQGDQGPIGLEGRAGVLGPKGQKGDXXXXXXXXXXXXXXXXXXXXPDGVKGSRGESGPNGAPGDPGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEVGPNGPDGKSGNKGAIGPTGQPGVRGSIGNPGKDGAL---------GPMGTSGMRGPPGNIGVEGSKGNKGPPG 3996
G G PG +GE G G G G +GA G G G G GP G +G G +GP G AGPIG G G G G GE GPVG G GP GP G++G PG G VG G G G+ G KG AG G+ G G PG RG GPVG G G +G +G+ G G +G SG +G+ G G G GP G +G +GP G G AG GP G +G G G G DG G G GP GA G G+ GPNG G+ G G +GP G PG G++G GK+G + GP+G +G RG PGNIG G KG G PG
Sbjct: 190 GQPGAPGVKGEPGAPGENGTPGQTGARGLPGERGRVGAPGPAGARGSDGSVGPVGPAGPIGSAGPPGFPGAPGPKGEIGPVGNPGPAGPAGPRGEVGLPGV---SGPVGPPGNPGANGLTGAKGAAGLPGVAGAPGLPGPRGIPGPVGAAGATGARGIVGEPGPAGSKGESGNKGEPGSAGAQGPPGPSGEEGKRGPNGEAGSAGPSGPPGLRGSPGSRGLPGA------------DGPAGVMGPPGPRGATGPAGVR------------------------------------------GPNGDSGRPGEPGLMGPRGFPGAPGNVGPAGKEGPMGLPGIDGRPGPIGPAGARGEPGNIGFPGPKGPTGDPG 505 HSP 5 Score: 57.7658 bits (138), Expect = 1.823e-6 Identity = 117/363 (32.23%), Postives = 140/363 (38.57%), Query Frame = 1
Query: 5200 VTGPPGARGEQGPAGPVGKEGLSGAPGFVGPTGEKGDTGPPGEQGDLGDIXXXXXXXXXXXXXXXXXXXXXXNVGERGPVGPDGMIGPPGPEGKIGSPGSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDGKSGKPGTRGPIGPVGINGRPG------KKGELGDIGLTGPQGISGPRGKRGRVGNPGEGGPKGSQGDQGPIGLEGRAGVLGPKGQKGDXXXXXXXXXXXXXXXXXXXXXDGVKGSRGESGPNGAPGDPGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVGPNGPDGKSGNKGAIGPTGQPGVRGSIGNPGKDGALGPMGTSGMRGPPGNIGVEGSKG 6270
+ G PG G +G +G G+ G +GA G GP+GE+G GP GE G G G G G G+ G G GP G++GPPGP G G G G +G SG+PG G +GP G G PG K+G +G G+ G G GP G RG GN G GPKG GD G G +G AG+ G +G G DG G++G GP G G G E GP GP G G G G G+ G G G PG+ G GP G G RGPPG G G G
Sbjct: 344 IVGEPGPAGSKGESGNKGEPGSAGAQGPPGPSGEEGKRGPNGEAGSAGP------------SGPPGLRGSPGSRGLPGADGPAGVMGPPGPRGATGPAGV---------------------------RGPNGDSGRPGEPGLMGPRGFPGAPGNVGPAGKEGPMGLPGIDGRPGPIGPAGARGEPGNIGFPGPKGPTGDPGKNGDKGHAGLAGARGAPGP---------------------DGNNGAQGPPGPQGVQGGKG------------------------------------------EQGPAGPPGFQGLPGPAGTAGEVGKPGERGLPGEFGLPGPAGPRGERGPPGESGAAGPSG 604 HSP 6 Score: 57.7658 bits (138), Expect = 1.823e-6 Identity = 117/363 (32.23%), Postives = 140/363 (38.57%), Query Frame = -1
Query: 2923 VTGPPGARGEQGPAGPVGKEGLSGAPGFVGPTGEKGDTGPPGEQGDLGDIXXXXXXXXXXXXXXXXXXXXXGNVGERGPVGPDGMIGPPGPEGKIGSPGSPXXXXXXXXXXXXXXXXXXXXXXXXXXXGLDGKSGKPGTRGPIGPVGINGRPG------KKGELGDIGLTGPQGISGPRGKRGRVGNPGEGGPKGSQGDQGPIGLEGRAGVLGPKGQKGDXXXXXXXXXXXXXXXXXXXXPDGVKGSRGESGPNGAPGDPGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEVGPNGPDGKSGNKGAIGPTGQPGVRGSIGNPGKDGALGPMGTSGMRGPPGNIGVEGSKG 3993
+ G PG G +G +G G+ G +GA G GP+GE+G GP GE G G G G G G+ G G GP G++GPPGP G G G G +G SG+PG G +GP G G PG K+G +G G+ G G GP G RG GN G GPKG GD G G +G AG+ G +G G DG G++G GP G G G E GP GP G G G G G+ G G G PG+ G GP G G RGPPG G G G
Sbjct: 344 IVGEPGPAGSKGESGNKGEPGSAGAQGPPGPSGEEGKRGPNGEAGSAGP------------SGPPGLRGSPGSRGLPGADGPAGVMGPPGPRGATGPAGV---------------------------RGPNGDSGRPGEPGLMGPRGFPGAPGNVGPAGKEGPMGLPGIDGRPGPIGPAGARGEPGNIGFPGPKGPTGDPGKNGDKGHAGLAGARGAPGP---------------------DGNNGAQGPPGPQGVQGGKG------------------------------------------EQGPAGPPGFQGLPGPAGTAGEVGKPGERGLPGEFGLPGPAGPRGERGPPGESGAAGPSG 604 HSP 7 Score: 56.9954 bits (136), Expect = 2.824e-6 Identity = 131/374 (35.03%), Postives = 149/374 (39.84%), Query Frame = 1
Query: 5197 GVTGPPGARGEQGPAGPVGKEG------LSGAPGFVGPTGEKGDTGPPGEQGDLGDIXXXXXXXXXXXXXXXXXXXXXXNVGERGPVGPDGMIGPPGPEGKIGSPGSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDGKSGKPGTRGPIGPVGINGRPGKKGELGDIGLTGPQGISGPRGKRGRVGNPGEGGPKGSQGDQGPIGLEGRAGVLGPKGQKGDXXXXXXXXXXXXXXXXXXXXXDGVKGSRGESGPNGAPGDPGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVGPNGPDGKSGNKGAIGPTGQPGVRGSIGNPGKDGALGPMGTSGMRGPPGNIGV---EGSKGNKGPPGS 6291
GV G PG G +G GPVG G + G PG G GE G+ G PG G G GP G G+RGP G G GP GP G GSPGS GL G G G GP GP G G G +G GD G G G+ GPRG G PG GP G +G G G++GR G +GP G +G+ G+ G GP G GDPG NG G G G G PG G G GP GP G G KG GP G PG +G PG G G +G G RG PG G+ G +G +GPPG
Sbjct: 316 GVAGAPGLPGPRGIPGPVGAAGATGARGIVGEPGPAGSKGESGNKGEPGSAGAQGP------------------PGPSGEEGKRGPNGEAGSAGPSGPPGLRGSPGS---------------------------RGLPGADGPAGVMGPPGPRGATGPAGVRGPNGDSGRPGEPGLMGPRG---FPGAPGNVGPAGKEGPMGLPGIDGRPGPIGPAGARGE------------------------PGNIGFPGPKGPTGDPGKNGDKGHAGLAGARGAPGPDGNNGAQ------------------GPPGPQGVQGGKGEQGPAGPPGFQGL---PGPAGTAGEVGKPGERGLPGEFGLPGPAGPRGERGPPGE 596 HSP 8 Score: 56.9954 bits (136), Expect = 2.824e-6 Identity = 131/374 (35.03%), Postives = 149/374 (39.84%), Query Frame = -1
Query: 2902 GVTGPPGARGEQGPAGPVGKEG------LSGAPGFVGPTGEKGDTGPPGEQGDLGDIXXXXXXXXXXXXXXXXXXXXXGNVGERGPVGPDGMIGPPGPEGKIGSPGSPXXXXXXXXXXXXXXXXXXXXXXXXXXXGLDGKSGKPGTRGPIGPVGINGRPGKKGELGDIGLTGPQGISGPRGKRGRVGNPGEGGPKGSQGDQGPIGLEGRAGVLGPKGQKGDXXXXXXXXXXXXXXXXXXXXPDGVKGSRGESGPNGAPGDPGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEVGPNGPDGKSGNKGAIGPTGQPGVRGSIGNPGKDGALGPMGTSGMRGPPGNIGV---EGSKGNKGPPGS 3996
GV G PG G +G GPVG G + G PG G GE G+ G PG G G GP G G+RGP G G GP GP G GSPGS GL G G G GP GP G G G +G GD G G G+ GPRG G PG GP G +G G G++GR G +GP G +G+ G+ G GP G GDPG NG G G G G PG G G GP GP G G KG GP G PG +G PG G G +G G RG PG G+ G +G +GPPG
Sbjct: 316 GVAGAPGLPGPRGIPGPVGAAGATGARGIVGEPGPAGSKGESGNKGEPGSAGAQGP------------------PGPSGEEGKRGPNGEAGSAGPSGPPGLRGSPGS---------------------------RGLPGADGPAGVMGPPGPRGATGPAGVRGPNGDSGRPGEPGLMGPRG---FPGAPGNVGPAGKEGPMGLPGIDGRPGPIGPAGARGE------------------------PGNIGFPGPKGPTGDPGKNGDKGHAGLAGARGAPGPDGNNGAQ------------------GPPGPQGVQGGKGEQGPAGPPGFQGL---PGPAGTAGEVGKPGERGLPGEFGLPGPAGPRGERGPPGE 596 HSP 9 Score: 56.225 bits (134), Expect = 5.133e-6 Identity = 91/231 (39.39%), Postives = 115/231 (49.78%), Query Frame = 1
Query: 5191 STGVTGPPGARGEQGPAG---------PVGKEGLSGAPGFVGPTGEKGDTGPPGEQGDLGD---IXXXXXXXXXXXXXXXXXXXXXXNVGERGPVGPDGMIGPPGPEGKIGSPGSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDGKSGKPGTRGPIGPVGING---RPGKKGELGDIGLTGPQGISGPRGKRGRVGNPGEGGPKGSQGDQGPIGLEGRAGVLGPKGQKG 5838
TG +GPPG GE+GP+G G +GL GAPG +G G +G+ G PG G +G+ +G G G GPPG G G G GE G G G GPPG +G+ G G +G G G G G PG GP+GP G +G PG G +G +G GP+G SGP+G RG G PGE GP+G G +G GL+G G+ G G +G
Sbjct: 833 ETGASGPPGFTGEKGPSGEPGTAGPPGTPGPQGLLGAPGILGLPGSRGERGLPGVAGSVGEPGPLGIAGPPGARGPPGAVGAPGVNGAPGEAGRDGNPGNDGPPGRDGQAGHKGE---------------------RGYPGNIGPVGAVGAPGPHGPVGPTGKHGNRGEPGPAGSVGPVGAVGPRGPSGPQGIRGDKGEPGEKGPRGLPGLKGHNGLQGLPGLAGQHGDQG 1042 HSP 10 Score: 56.225 bits (134), Expect = 5.133e-6 Identity = 91/231 (39.39%), Postives = 115/231 (49.78%), Query Frame = -1
Query: 3355 STGVTGPPGARGEQGPAG---------PVGKEGLSGAPGFVGPTGEKGDTGPPGEQGDLGD---IXXXXXXXXXXXXXXXXXXXXXGNVGERGPVGPDGMIGPPGPEGKIGSPGSPXXXXXXXXXXXXXXXXXXXXXXXXXXXGLDGKSGKPGTRGPIGPVGING---RPGKKGELGDIGLTGPQGISGPRGKRGRVGNPGEGGPKGSQGDQGPIGLEGRAGVLGPKGQKG 4002
TG +GPPG GE+GP+G G +GL GAPG +G G +G+ G PG G +G+ +G G G GPPG G G G GE G G G GPPG +G+ G G +G G G G G PG GP+GP G +G PG G +G +G GP+G SGP+G RG G PGE GP+G G +G GL+G G+ G G +G
Sbjct: 833 ETGASGPPGFTGEKGPSGEPGTAGPPGTPGPQGLLGAPGILGLPGSRGERGLPGVAGSVGEPGPLGIAGPPGARGPPGAVGAPGVNGAPGEAGRDGNPGNDGPPGRDGQAGHKGE---------------------RGYPGNIGPVGAVGAPGPHGPVGPTGKHGNRGEPGPAGSVGPVGAVGPRGPSGPQGIRGDKGEPGEKGPRGLPGLKGHNGLQGLPGLAGQHGDQG 1042
BLAST of collagen vs. uniprot
Match: gi|123797137|sp|Q3U962|CO5A2_MOUSE (RecName: Full=Collagen alpha-2(V) chain; Flags: Precursor) HSP 1 Score: 142.51 bits (358), Expect = 3.483e-32 Identity = 76/221 (34.39%), Postives = 114/221 (51.58%), Query Frame = 1
Query: 8158 NAIKNPQGTKEVPARTCKHLSSVNPQAPDGEYWIDPNGGRIEDAVKVYCKISEQKTCIKSIDNNLSIRSW---NSPILNGPTWLQKLINKNEI----QYSVPN---NQLAFLKVYSDNAVQRVTFNCENHPIIGNEKIFNKVTAPRLLADDDSIIKMT-HPKLKYSVIKDECQYSKSSEAESVIEVK--DVANLLPIRDVGIHIINNRKSKFGLTIEDVCF 8781
+++P G+K+ PARTC L +P GEYWIDPN G EDA+KVYC + +TCI + ++ ++W SP N P W +N+ Y PN Q+ FL++ S A Q +T+ C N +++ N A L +D IK + + +Y+V++D C + +++ E + +VA LPI DVG I N +FGL I VCF
Sbjct: 1278 ETMRSPDGSKKHPARTCDDLKLCHPTKQSGEYWIDPNQGSAEDAIKVYCNMETGETCISANPASVPRKTWWASKSPD-NKPVWYGLDMNRGSQFTYGDYQSPNTAITQMTFLRLLSKEASQNLTYICRNTVGYMDDQAKNLKKAVVLKGSNDLEIKGEGNIRFRYTVLQDTCSKRNGNVGKTIFEYRTQNVAR-LPIIDVGPVDIGNADQEFGLDIGPVCF 1496 HSP 2 Score: 142.51 bits (358), Expect = 3.483e-32 Identity = 76/221 (34.39%), Postives = 114/221 (51.58%), Query Frame = -1
Query: 412 NAIKNPQGTKEVPARTCKHLSSVNPQAPDGEYWIDPNGGRIEDAVKVYCKISEQKTCIKSIDNNLSIRSW---NSPILNGPTWLQKLINKNEI----QYSVPN---NQLAFLKVYSDNAVQRVTFNCENHPIIGNEKIFNKVTAPRLLADDDSIIKMT-HPKLKYSVIKDECQYSKSSEAESVIEVK--DVANLLPIRDVGIHIINNRKSKFGLTIEDVCF 1035
+++P G+K+ PARTC L +P GEYWIDPN G EDA+KVYC + +TCI + ++ ++W SP N P W +N+ Y PN Q+ FL++ S A Q +T+ C N +++ N A L +D IK + + +Y+V++D C + +++ E + +VA LPI DVG I N +FGL I VCF
Sbjct: 1278 ETMRSPDGSKKHPARTCDDLKLCHPTKQSGEYWIDPNQGSAEDAIKVYCNMETGETCISANPASVPRKTWWASKSPD-NKPVWYGLDMNRGSQFTYGDYQSPNTAITQMTFLRLLSKEASQNLTYICRNTVGYMDDQAKNLKKAVVLKGSNDLEIKGEGNIRFRYTVLQDTCSKRNGNVGKTIFEYRTQNVAR-LPIIDVGPVDIGNADQEFGLDIGPVCF 1496 HSP 3 Score: 72.7886 bits (177), Expect = 4.583e-11 Identity = 129/368 (35.05%), Postives = 153/368 (41.58%), Query Frame = 1
Query: 5191 STGVTGPPGARGEQGPAGPVGKEGLSGAPGFVGPTGEKGDTGPPGEQGDLGDIXXXXXXXXXXXXXXXXXXXXXXNVGERGPVGPDGMIGPPGPEGKIGSPGSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDGKSGKPGTRGPIGPVGINGRPGKKGELGDIGLTGPQGISGPRGKRGRVGNPGEGGPKGSQGDQGPIGLEGRAGVLGPKGQKGDXXXXXXXXXXXXXXXXXXXXXDGVKGSRGESGPNGAPGDPGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVGPNGPDGKSGNKGAIGPTGQPGVRGSIGNPGKDGALGPMGTSGMRGPPGNIGVEGSKGNKGPPGSR 6294
G +G PGARG G G G +G G G GP GE G G GE G G + G GP+GP GM PG G++G G+PG+ G G GKPG GP+G G +G PG G G+ G TG +G GP+G+RG G PG P GSQG G +G +G G GP G G G PG G G GP G GP G++G G+ PG PG G E GP G G G +G IGP G+ G RG G+PG G GPMG RG PGN G GS G GP G++
Sbjct: 275 EVGFSGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEIGAPGAKGEAGPTGPM------------------------GAMGPLGPRGM---PGERGRLGPQGAPGKRG------------------------AHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPG---PAGSQGLPGAVGTDGTPGAKGPTGSAGTSGPPGLAGPPGSPGPQGSTGPQGIRGQSGD------PGVPGFKG---------------------------------------EAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPMGE---RGAPGNRGFPGSDGLPGPKGAQ 540 HSP 4 Score: 72.7886 bits (177), Expect = 4.583e-11 Identity = 129/368 (35.05%), Postives = 153/368 (41.58%), Query Frame = -1
Query: 2899 STGVTGPPGARGEQGPAGPVGKEGLSGAPGFVGPTGEKGDTGPPGEQGDLGDIXXXXXXXXXXXXXXXXXXXXXGNVGERGPVGPDGMIGPPGPEGKIGSPGSPXXXXXXXXXXXXXXXXXXXXXXXXXXXGLDGKSGKPGTRGPIGPVGINGRPGKKGELGDIGLTGPQGISGPRGKRGRVGNPGEGGPKGSQGDQGPIGLEGRAGVLGPKGQKGDXXXXXXXXXXXXXXXXXXXXPDGVKGSRGESGPNGAPGDPGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEVGPNGPDGKSGNKGAIGPTGQPGVRGSIGNPGKDGALGPMGTSGMRGPPGNIGVEGSKGNKGPPGSR 4002
G +G PGARG G G G +G G G GP GE G G GE G G + G GP+GP GM PG G++G G+PG+ G G GKPG GP+G G +G PG G G+ G TG +G GP+G+RG G PG P GSQG G +G +G G GP G G G PG G G GP G GP G++G G+ PG PG G E GP G G G +G IGP G+ G RG G+PG G GPMG RG PGN G GS G GP G++
Sbjct: 275 EVGFSGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEIGAPGAKGEAGPTGPM------------------------GAMGPLGPRGM---PGERGRLGPQGAPGKRG------------------------AHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPG---PAGSQGLPGAVGTDGTPGAKGPTGSAGTSGPPGLAGPPGSPGPQGSTGPQGIRGQSGD------PGVPGFKG---------------------------------------EAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPMGE---RGAPGNRGFPGSDGLPGPKGAQ 540 HSP 5 Score: 62.003 bits (149), Expect = 8.832e-8 Identity = 152/404 (37.62%), Postives = 174/404 (43.07%), Query Frame = 1
Query: 5191 STGVTGPPGARGEQGPAGPVGKEGLSGAPGFVGPTGEKGDTGPPGEQGDLGDIXXXXXXXXXXXXXXXXXXXXXXNVGERGPVGP---------DGMIGPPGPEGKIGSPGSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDGKSGKPGTRGPIGPVGINGRPGKKGELGDIGL------------------TGPQGISGPRGKRGRVGNPGEGGPKGS---QGDQGPIGLEGRAGVLGPKGQKGDXXXXXXXXXXXXXXXXXXXXXDGVKGSRGESGPNGAPGDPGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVGPNGPDGKSGNKGAIGPTGQPGVRGSIGNP---GKDGALGPMGT---SGMRGPPGNIGVEGSKGNKGPPGSR 6294
S G G PGA G G G G +GL G G +G G KG+ GP G G +G +GP G GERG +GP GM G PGP G +G PGS G PG G KGE G G +G +G G+ G G G G++G G VG +G PG KG G G TGPQGI G G G G GE GPKG G QGPIG G G GP+G G G P G G RG G G PG GL PGP GA G RG VG +GP G G+ G G G PG RG GNP G +G LGP+G G GPPG+IG+ G G+ G PG +
Sbjct: 281 SPGARGFPGAPGLPGLKGHRGHKGLEGPKGEIGAPGAKGEAGPTGPMGAMGPLGPRGMP------------------GERGRLGPQGAPGKRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPAGSQGLPGAVGTDGTPGAKGPTGSAGTSGPPGLAGPPGSPGPQGSTGPQGIRGQSGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGPP------------------GPMGERGAPGNRGFPGSDGL------------------------------PGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPK 618 HSP 6 Score: 62.003 bits (149), Expect = 8.832e-8 Identity = 152/404 (37.62%), Postives = 174/404 (43.07%), Query Frame = -1
Query: 2899 STGVTGPPGARGEQGPAGPVGKEGLSGAPGFVGPTGEKGDTGPPGEQGDLGDIXXXXXXXXXXXXXXXXXXXXXGNVGERGPVGP---------DGMIGPPGPEGKIGSPGSPXXXXXXXXXXXXXXXXXXXXXXXXXXXGLDGKSGKPGTRGPIGPVGINGRPGKKGELGDIGL------------------TGPQGISGPRGKRGRVGNPGEGGPKGS---QGDQGPIGLEGRAGVLGPKGQKGDXXXXXXXXXXXXXXXXXXXXPDGVKGSRGESGPNGAPGDPGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEVGPNGPDGKSGNKGAIGPTGQPGVRGSIGNP---GKDGALGPMGT---SGMRGPPGNIGVEGSKGNKGPPGSR 4002
S G G PGA G G G G +GL G G +G G KG+ GP G G +G +GP G GERG +GP GM G PGP G +G PGS G PG G KGE G G +G +G G+ G G G G++G G VG +G PG KG G G TGPQGI G G G G GE GPKG G QGPIG G G GP+G G G P G G RG G G PG GL PGP GA G RG VG +GP G G+ G G G PG RG GNP G +G LGP+G G GPPG+IG+ G G+ G PG +
Sbjct: 281 SPGARGFPGAPGLPGLKGHRGHKGLEGPKGEIGAPGAKGEAGPTGPMGAMGPLGPRGMP------------------GERGRLGPQGAPGKRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPAGSQGLPGAVGTDGTPGAKGPTGSAGTSGPPGLAGPPGSPGPQGSTGPQGIRGQSGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGPP------------------GPMGERGAPGNRGFPGSDGL------------------------------PGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPK 618 HSP 7 Score: 61.2326 bits (147), Expect = 1.836e-7 Identity = 81/209 (38.76%), Postives = 95/209 (45.45%), Query Frame = 1
Query: 5233 GPAGPVGKEGLSGAPGFVGPTGEKGDTGPPGEQGDLGDIXXXXXXXXXXXXXXXXXXXXXXNVGERGPVGPDGMIGPPGPEGKIGSPGSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDGKSGKPGTRGPIGPVGING------RPGKKGELGDIGLTGPQGISGPRGKRGRVGNPGEGGPKGSQGDQGPIGLEGRAGVLGPKGQKGD 5841
GP G G+ G G PGF G G KG+ GP G QG +G P G G+RGP G G +GPPGP G+ G+PG+ +G G GL G G G RGP+G G G RPG+ G G GLTG G+ GP GK G +G PGE G G G G G G G+ GPKG GD
Sbjct: 457 GPQGIRGQSGDPGVPGFKGEAGPKGEPGPHGIQGPIG---------------------PPGEEGKRGPRGDPGTVGPPGPMGERGAPGN---------------------RGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGD 623 HSP 8 Score: 61.2326 bits (147), Expect = 1.836e-7 Identity = 81/209 (38.76%), Postives = 95/209 (45.45%), Query Frame = -1
Query: 3352 GPAGPVGKEGLSGAPGFVGPTGEKGDTGPPGEQGDLGDIXXXXXXXXXXXXXXXXXXXXXGNVGERGPVGPDGMIGPPGPEGKIGSPGSPXXXXXXXXXXXXXXXXXXXXXXXXXXXGLDGKSGKPGTRGPIGPVGING------RPGKKGELGDIGLTGPQGISGPRGKRGRVGNPGEGGPKGSQGDQGPIGLEGRAGVLGPKGQKGD 3960
GP G G+ G G PGF G G KG+ GP G QG +G P G G+RGP G G +GPPGP G+ G+PG+ +G G GL G G G RGP+G G G RPG+ G G GLTG G+ GP GK G +G PGE G G G G G G G+ GPKG GD
Sbjct: 457 GPQGIRGQSGDPGVPGFKGEAGPKGEPGPHGIQGPIG---------------------PPGEEGKRGPRGDPGTVGPPGPMGERGAPGN---------------------RGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGD 623 HSP 9 Score: 60.8474 bits (146), Expect = 2.083e-7 Identity = 98/251 (39.04%), Postives = 118/251 (47.01%), Query Frame = 1
Query: 5593 GKSGKPGTRGPIGPVGINGRPGKKGELGDIGLTGPQGISGPRGKRGRVGNPGEGGPKGSQGDQGPIGLEGR------AGVLGPK------GQKGDXXXXXXXXXXXXXXXXXXXXXDGVKGSRGESGPNGAPGDPGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVGPNGPDGKSGNKGAIGPTGQPGVRGSIGNPGKDGALGPMGTSGM------RGPPGNIGVEGSKGNKGPPGS 6291
G G+PG GP+GP G G PG++GE G GL G +G++G G G GNPG P G+ GD GP GL+G AG GPK G+KG G G G G GP+GP GP G G +GE GP G G PG G PG G NGP G G G GP GQPGV+G G PG+ G G G G+ GP G G++G +G +GPPG+
Sbjct: 694 GVPGEPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGNPG---PTGTIGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPG------------------------------------SRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPHGVPGLKGGRGTQGPPGA 905 HSP 10 Score: 60.8474 bits (146), Expect = 2.083e-7 Identity = 98/251 (39.04%), Postives = 118/251 (47.01%), Query Frame = -1
Query: 2902 GKSGKPGTRGPIGPVGINGRPGKKGELGDIGLTGPQGISGPRGKRGRVGNPGEGGPKGSQGDQGPIGLEGR------AGVLGPK------GQKGDXXXXXXXXXXXXXXXXXXXXPDGVKGSRGESGPNGAPGDPGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEVGPNGPDGKSGNKGAIGPTGQPGVRGSIGNPGKDGALGPMGTSGM------RGPPGNIGVEGSKGNKGPPGS 3600
G G+PG GP+GP G G PG++GE G GL G +G++G G G GNPG P G+ GD GP GL+G AG GPK G+KG G G G G GP+GP GP G G +GE GP G G PG G PG G NGP G G G GP GQPGV+G G PG+ G G G G+ GP G G++G +G +GPPG+
Sbjct: 694 GVPGEPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGNPG---PTGTIGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPG------------------------------------SRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPHGVPGLKGGRGTQGPPGA 905 HSP 11 Score: 55.8398 bits (133), Expect = 7.754e-6 Identity = 107/272 (39.34%), Postives = 122/272 (44.85%), Query Frame = 1
Query: 5221 RGEQGPAGPV------------------GKEGLSGAPGFVGPTGEKGDTGPPGEQGDLGDIXXXXXXXXXXXXXXXXXXXXXXNVGERGPVGPDGMIGPPGPEGKIGSPGSP------XXXXXXXXXXXXXXXXXXXXXXXXXXXXLDGKSGKPGTRGPIGPVGINGRPGKKGELGDIGLTGPQGISGPRGKRGRVGNPGEGGPKGSQGDQGPIGLEGRAGVLGPKGQKGDXXXXXXXXXXXXXXXXXXXXXDGVKGSRGESGPNGAPGDPG 5964
RGEQGP GP G +G+ G PG VGP G +G+ G PGE+G+ G G PG G G G GP G G G G GP G+ G PG G G+PG G G G G G G+ G G G G G+ G+PG RG +GP G G PG +GE G G G G GP G+ G G PGE G KG G GP GL G G GP G G+KG RG GP GA G PG
Sbjct: 663 RGEQGPPGPTGFQGLPGPPGPPGEGGKAGDQGVPGEPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGNPGPTGTIGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPHG------------------------VPGLKGGRGTQGPPGATGFPG 910 HSP 12 Score: 55.8398 bits (133), Expect = 7.754e-6 Identity = 107/272 (39.34%), Postives = 122/272 (44.85%), Query Frame = -1
Query: 3229 RGEQGPAGPV------------------GKEGLSGAPGFVGPTGEKGDTGPPGEQGDLGDIXXXXXXXXXXXXXXXXXXXXXGNVGERGPVGPDGMIGPPGPEGKIGSPGSP------XXXXXXXXXXXXXXXXXXXXXXXXXXXGLDGKSGKPGTRGPIGPVGINGRPGKKGELGDIGLTGPQGISGPRGKRGRVGNPGEGGPKGSQGDQGPIGLEGRAGVLGPKGQKGDXXXXXXXXXXXXXXXXXXXXPDGVKGSRGESGPNGAPGDPG 3972
RGEQGP GP G +G+ G PG VGP G +G+ G PGE+G+ G G PG G G G GP G G G G GP G+ G PG G G+PG G G G G G G+ G G G G G+ G+PG RG +GP G G PG +GE G G G G GP G+ G G PGE G KG G GP GL G G GP G G+KG RG GP GA G PG
Sbjct: 663 RGEQGPPGPTGFQGLPGPPGPPGEGGKAGDQGVPGEPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGNPGPTGTIGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPHG------------------------VPGLKGGRGTQGPPGATGFPG 910
BLAST of collagen vs. uniprot
Match: gi|296439507|sp|P08123|CO1A2_HUMAN (RecName: Full=Collagen alpha-2(I) chain; AltName: Full=Alpha-2 type I collagen; Flags: Precursor) HSP 1 Score: 142.124 bits (357), Expect = 4.022e-32 Identity = 69/223 (30.94%), Postives = 116/223 (52.02%), Query Frame = 1
Query: 8155 NNAIKN---PQGTKEVPARTCKHLSSVNPQAPDGEYWIDPNGGRIEDAVKVYCKISEQKTCIKSIDNNLSIRSW-NSPILNGPTWLQKLINK-NEIQYSVPN-------NQLAFLKVYSDNAVQRVTFNCENHPIIGNEKIFNKVTAPRLLADDD-SIIKMTHPKLKYSVIKDECQYSKSSEAESVIEVK-DVANLLPIRDVGIHIINNRKSKFGLTIEDVCF 8781
NN I+ P+G+++ PARTC+ L +P+ G YWIDPN G DA+KVYC S +TCI++ N+ ++W S WL + IN ++ +Y+V QLAF+++ ++ A Q +T++C+N +E+ N A L +D ++ + + Y+V+ D C + +++IE K + + LP D+ I +F + I VCF
Sbjct: 1143 NNQIETLLTPEGSRKNPARTCRDLRLSHPEWSSGYYWIDPNQGCTMDAIKVYCDFSTGETCIRAQPENIPAKNWYRSSKDKKHVWLGETINAGSQFEYNVEGVTSKEMATQLAFMRLLANYASQNITYHCKNSIAYMDEETGNLKKAVILQGSNDVELVAEGNSRFTYTVLVDGCSKKTNEWGKTIIEYKTNKPSRLPFLDIAPLDIGGADQEFFVDIGPVCF 1365 HSP 2 Score: 142.124 bits (357), Expect = 4.022e-32 Identity = 69/223 (30.94%), Postives = 116/223 (52.02%), Query Frame = -1
Query: 412 NNAIKN---PQGTKEVPARTCKHLSSVNPQAPDGEYWIDPNGGRIEDAVKVYCKISEQKTCIKSIDNNLSIRSW-NSPILNGPTWLQKLINK-NEIQYSVPN-------NQLAFLKVYSDNAVQRVTFNCENHPIIGNEKIFNKVTAPRLLADDD-SIIKMTHPKLKYSVIKDECQYSKSSEAESVIEVK-DVANLLPIRDVGIHIINNRKSKFGLTIEDVCF 1038
NN I+ P+G+++ PARTC+ L +P+ G YWIDPN G DA+KVYC S +TCI++ N+ ++W S WL + IN ++ +Y+V QLAF+++ ++ A Q +T++C+N +E+ N A L +D ++ + + Y+V+ D C + +++IE K + + LP D+ I +F + I VCF
Sbjct: 1143 NNQIETLLTPEGSRKNPARTCRDLRLSHPEWSSGYYWIDPNQGCTMDAIKVYCDFSTGETCIRAQPENIPAKNWYRSSKDKKHVWLGETINAGSQFEYNVEGVTSKEMATQLAFMRLLANYASQNITYHCKNSIAYMDEETGNLKKAVILQGSNDVELVAEGNSRFTYTVLVDGCSKKTNEWGKTIIEYKTNKPSRLPFLDIAPLDIGGADQEFFVDIGPVCF 1365 HSP 3 Score: 56.225 bits (134), Expect = 4.880e-6 Identity = 92/228 (40.35%), Postives = 114/228 (50.00%), Query Frame = 1
Query: 5191 STGVTGPPGARGEQGPAG---------PVGKEGLSGAPGFVGPTGEKGDTGPPGEQGDLGDIXXXXXXXXXXXXXXXXXXXXXXNVGERGPVGPDGMIGPPGPEGKIGSPGSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDGKSGKPGTRGPIGPVGINGRPGKKGELGDIG---LTGPQGISGPRGKRGRVGNPGEGGPKGSQGDQGPIGLEGRAGVLGPKGQKG 5838
G GPPG GE+GP+G G +GL GAPG +G G +G+ G PG G +G+ GP G AGP G G G G G G G G DG G GP G+ G PG KG +G G G G +G PG GP+GP G +G G+ G G +G GP+G SGP+G RG G PGE GP+G G +G GL+G G+ G G +G
Sbjct: 833 EVGAVGPPGFAGEKGPSGEAGTAGPPGTPGPQGLLGAPGILGLPGSRGERGLPGVAGAVGEPGPLGIAGPPGARGPPGAVGSPGVNGAPGEAGRDGNPGNDGPPGRDGQPGH------------------KGERGYPGNIGPVGAAGAPGPHGPVGPAGKHGNRGETGPSGPVGPAGAVGPRGPSGPQGIRGDKGEPGEKGPRGLPGLKGHNGLQGLPGIAGHHGDQG 1042 HSP 4 Score: 56.225 bits (134), Expect = 4.880e-6 Identity = 92/228 (40.35%), Postives = 114/228 (50.00%), Query Frame = -1
Query: 3355 STGVTGPPGARGEQGPAG---------PVGKEGLSGAPGFVGPTGEKGDTGPPGEQGDLGDIXXXXXXXXXXXXXXXXXXXXXGNVGERGPVGPDGMIGPPGPEGKIGSPGSPXXXXXXXXXXXXXXXXXXXXXXXXXXXGLDGKSGKPGTRGPIGPVGINGRPGKKGELGDIG---LTGPQGISGPRGKRGRVGNPGEGGPKGSQGDQGPIGLEGRAGVLGPKGQKG 4002
G GPPG GE+GP+G G +GL GAPG +G G +G+ G PG G +G+ GP G AGP G G G G G G G G DG G GP G+ G PG KG +G G G G +G PG GP+GP G +G G+ G G +G GP+G SGP+G RG G PGE GP+G G +G GL+G G+ G G +G
Sbjct: 833 EVGAVGPPGFAGEKGPSGEAGTAGPPGTPGPQGLLGAPGILGLPGSRGERGLPGVAGAVGEPGPLGIAGPPGARGPPGAVGSPGVNGAPGEAGRDGNPGNDGPPGRDGQPGH------------------KGERGYPGNIGPVGAAGAPGPHGPVGPAGKHGNRGETGPSGPVGPAGAVGPRGPSGPQGIRGDKGEPGEKGPRGLPGLKGHNGLQGLPGIAGHHGDQG 1042
BLAST of collagen vs. uniprot
Match: gi|8039779|sp|P02465|CO1A2_BOVIN (RecName: Full=Collagen alpha-2(I) chain; AltName: Full=Alpha-2 type I collagen; Flags: Precursor) HSP 1 Score: 141.354 bits (355), Expect = 7.195e-32 Identity = 74/249 (29.72%), Postives = 125/249 (50.20%), Query Frame = 1
Query: 8077 VMAMQMRSPTKGVVYGDDPKAAELLGNNAIKN---PQGTKEVPARTCKHLSSVNPQAPDGEYWIDPNGGRIEDAVKVYCKISEQKTCIKSIDNNLSIRSW-NSPILNGPTWLQKLIN-KNEIQYSVPN-------NQLAFLKVYSDNAVQRVTFNCENHPIIGNEKIFNKVTAPRLLADDD-SIIKMTHPKLKYSVIKDECQYSKSSEAESVIEVK-DVANLLPIRDVGIHIINNRKSKFGLTIEDVCF 8781
A Q RSPT + A NN I+ P+G+++ PARTC+ L +P+ G YWIDPN G DA+KVYC S +TCI++ ++ +++W + W+ + IN + +Y+V QLAF+++ +++A Q +T++C+N +E+ N A L +D ++ + + Y+V+ D C + +++IE K + + LPI D+ I + L I VCF
Sbjct: 1115 YRADQPRSPTSLRPKDYEVDATLKSLNNQIETLLTPEGSRKNPARTCRDLRLSHPEWSSGYYWIDPNQGCTMDAIKVYCDFSTGETCIRAQPEDIPVKNWYRNSKAKKHVWVGETINGGTQFEYNVEGVTTKEMATQLAFMRLLANHASQNITYHCKNSIAYMDEETGNLKKAVILQGSNDVELVAEGNSRFTYTVLVDGCSKKTNEWQKTIIEYKTNKPSRLPILDIAPLDIGGADQEIRLNIGPVCF 1363 HSP 2 Score: 141.354 bits (355), Expect = 7.195e-32 Identity = 74/249 (29.72%), Postives = 125/249 (50.20%), Query Frame = -1
Query: 412 VMAMQMRSPTKGVVYGDDPKAAELLGNNAIKN---PQGTKEVPARTCKHLSSVNPQAPDGEYWIDPNGGRIEDAVKVYCKISEQKTCIKSIDNNLSIRSW-NSPILNGPTWLQKLIN-KNEIQYSVPN-------NQLAFLKVYSDNAVQRVTFNCENHPIIGNEKIFNKVTAPRLLADDD-SIIKMTHPKLKYSVIKDECQYSKSSEAESVIEVK-DVANLLPIRDVGIHIINNRKSKFGLTIEDVCF 1116
A Q RSPT + A NN I+ P+G+++ PARTC+ L +P+ G YWIDPN G DA+KVYC S +TCI++ ++ +++W + W+ + IN + +Y+V QLAF+++ +++A Q +T++C+N +E+ N A L +D ++ + + Y+V+ D C + +++IE K + + LPI D+ I + L I VCF
Sbjct: 1115 YRADQPRSPTSLRPKDYEVDATLKSLNNQIETLLTPEGSRKNPARTCRDLRLSHPEWSSGYYWIDPNQGCTMDAIKVYCDFSTGETCIRAQPEDIPVKNWYRNSKAKKHVWVGETINGGTQFEYNVEGVTTKEMATQLAFMRLLANHASQNITYHCKNSIAYMDEETGNLKKAVILQGSNDVELVAEGNSRFTYTVLVDGCSKKTNEWQKTIIEYKTNKPSRLPILDIAPLDIGGADQEIRLNIGPVCF 1363 HSP 3 Score: 62.003 bits (149), Expect = 9.180e-8 Identity = 94/228 (41.23%), Postives = 117/228 (51.32%), Query Frame = 1
Query: 5191 STGVTGPPGARGEQGPAG---------PVGKEGLSGAPGFVGPTGEKGDTGPPGEQGDLGDIXXXXXXXXXXXXXXXXXXXXXXNVGERGPVGPDGMIGPPGPEGKIGSPGSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDGKSGKPGTRGPIGPVGING---RPGKKGELGDIGLTGPQGISGPRGKRGRVGNPGEGGPKGSQGDQGPIGLEGRAGVLGPKGQKG 5838
TG +GPPG GE+GP+G G +GL GAPGF+G G +G+ G PG G +G+ GP G AGP G G G G G G G G DG G GP G+ G PG G G G G G +G PG +GP+GPVG +G PG G +G G GP+G SGP+G RG G PG+ GP+G G +G GL+G G+ G G +G
Sbjct: 831 ETGASGPPGFVGEKGPSGEPGTAGPPGTPGPQGLLGAPGFLGLPGSRGERGLPGVAGSVGEPGPLGIAGPPGARGPPGNVGNPGVNGAPGEAGRDGNPGNDGPPGRDGQPGHKGERGYPGNAGPV------------------GAAGAPGPQGPVGPVGKHGNRGEPGPAGAVGPAGAVGPRGPSGPQGIRGDKGEPGDKGPRGLPGLKGHNGLQGLPGLAGHHGDQG 1040 HSP 4 Score: 62.003 bits (149), Expect = 9.180e-8 Identity = 94/228 (41.23%), Postives = 117/228 (51.32%), Query Frame = -1
Query: 3355 STGVTGPPGARGEQGPAG---------PVGKEGLSGAPGFVGPTGEKGDTGPPGEQGDLGDIXXXXXXXXXXXXXXXXXXXXXGNVGERGPVGPDGMIGPPGPEGKIGSPGSPXXXXXXXXXXXXXXXXXXXXXXXXXXXGLDGKSGKPGTRGPIGPVGING---RPGKKGELGDIGLTGPQGISGPRGKRGRVGNPGEGGPKGSQGDQGPIGLEGRAGVLGPKGQKG 4002
TG +GPPG GE+GP+G G +GL GAPGF+G G +G+ G PG G +G+ GP G AGP G G G G G G G G DG G GP G+ G PG G G G G G +G PG +GP+GPVG +G PG G +G G GP+G SGP+G RG G PG+ GP+G G +G GL+G G+ G G +G
Sbjct: 831 ETGASGPPGFVGEKGPSGEPGTAGPPGTPGPQGLLGAPGFLGLPGSRGERGLPGVAGSVGEPGPLGIAGPPGARGPPGNVGNPGVNGAPGEAGRDGNPGNDGPPGRDGQPGHKGERGYPGNAGPV------------------GAAGAPGPQGPVGPVGKHGNRGEPGPAGAVGPAGAVGPRGPSGPQGIRGDKGEPGDKGPRGLPGLKGHNGLQGLPGLAGHHGDQG 1040
BLAST of collagen vs. uniprot
Match: gi|18202250|sp|O93484|CO1A2_ONCMY (RecName: Full=Collagen alpha-2(I) chain; AltName: Full=Alpha-2 type I collagen; Flags: Precursor [Oncorhynchus mykiss]) HSP 1 Score: 139.043 bits (349), Expect = 3.978e-31 Identity = 68/223 (30.49%), Postives = 112/223 (50.22%), Query Frame = 1
Query: 8155 NNAIKN---PQGTKEVPARTCKHLSSVNPQAPDGEYWIDPNGGRIEDAVKVYCKISEQKTCIKSIDNNLSIRSWNSPILN-GPTWLQKLIN-KNEIQYSVPN-------NQLAFLKVYSDNAVQRVTFNCENHPIIGNEKIFNKVTAPRLLADDDSIIKMT-HPKLKYSVIKDECQYSKSSEAESVIEVK-DVANLLPIRDVGIHIINNRKSKFGLTIEDVCF 8781
N+ I+N P+G+K+ PARTC+ + +P G YWIDPN G I DA+K YC S TCI +++ ++W N W + IN E Y+ QLAF+++ ++ A Q +T++C+N + + N A L +D ++ + + ++V++D C +++VIE + + + LPI D+ I +FGL I VCF
Sbjct: 1133 NSQIENLLTPEGSKKNPARTCRDIRLSHPDWSSGFYWIDPNQGCIADAIKAYCDFSTGHTCIHPHPESIARKNWYRSSENKKHVWFGETINGGTEFAYNDETLSPQSMATQLAFMRLLANQATQNITYHCKNSVAYMDGENGNLKKAVLLQGSNDVELRAEGNSRFTFNVLEDGCTRHTGQWSKTVIEYRTNKPSRLPILDIAPLDIGEADQEFGLDIGPVCF 1355 HSP 2 Score: 139.043 bits (349), Expect = 3.978e-31 Identity = 68/223 (30.49%), Postives = 112/223 (50.22%), Query Frame = -1
Query: 412 NNAIKN---PQGTKEVPARTCKHLSSVNPQAPDGEYWIDPNGGRIEDAVKVYCKISEQKTCIKSIDNNLSIRSWNSPILN-GPTWLQKLIN-KNEIQYSVPN-------NQLAFLKVYSDNAVQRVTFNCENHPIIGNEKIFNKVTAPRLLADDDSIIKMT-HPKLKYSVIKDECQYSKSSEAESVIEVK-DVANLLPIRDVGIHIINNRKSKFGLTIEDVCF 1038
N+ I+N P+G+K+ PARTC+ + +P G YWIDPN G I DA+K YC S TCI +++ ++W N W + IN E Y+ QLAF+++ ++ A Q +T++C+N + + N A L +D ++ + + ++V++D C +++VIE + + + LPI D+ I +FGL I VCF
Sbjct: 1133 NSQIENLLTPEGSKKNPARTCRDIRLSHPDWSSGFYWIDPNQGCIADAIKAYCDFSTGHTCIHPHPESIARKNWYRSSENKKHVWFGETINGGTEFAYNDETLSPQSMATQLAFMRLLANQATQNITYHCKNSVAYMDGENGNLKKAVLLQGSNDVELRAEGNSRFTFNVLEDGCTRHTGQWSKTVIEYRTNKPSRLPILDIAPLDIGEADQEFGLDIGPVCF 1355 HSP 3 Score: 58.151 bits (139), Expect = 1.344e-6 Identity = 187/413 (45.28%), Postives = 213/413 (51.57%), Query Frame = 1
Query: 5194 TGVTGPPGARGEQGPAGPVGKEGLSGAPGFVGPTGEKGDTGPPGEQGDLGDIXXXXXXXXXXXXXXXXXXXXXXNVGERGPVG---PDGMIGPPGPEGKIGSPGSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDGKSGKPGTRGPIGPVGINGRP---GKKGELGDIGLTGPQGISGPRGKRGR---VGNPGEGGPKGSQGDQGPIGLEGRAGVLGPKGQKGDXXXXXXXXXXXXXXXXXXXXXDGVKGSRGESGPNGAPGDPGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVGPNGPDGKSGNKG------------------AIGPTG---QPGVRGSIGNPGKDGA------LGPMGTSGMRGPPGNIGV------------EGSKGNKGPPG 6288
GV G G +GEQGPAG G +GL PG GP GE G G G GD G GP G G G G +G G QG +G RGP G PDG G PG G +G+ G G G G++G GG G KG KGE G GL+G G+ G RG GP G G G+KGE G G GP G+ GP G+RG G PG GP GS G GP G + GP G KGD G G G +G GP G GP G G RG++GP+G G PG G+ G GP GI G PG AGP G+ GP G G G GP+GE G GP G SG+KG +GP+G PG RG G PG GA LGP G SG RGP GNIG+ EG+ GN GPPG
Sbjct: 528 AGVVGNTGEKGEQGPAGAPGFQGL---PGPAGPAGEAGKAGNQGMPGDQGLPGPAGVKGERGNSGPAGSAGSQGAIGARGPAGTPGPDGGKGEPGSVGIVGAAGHQGPGGMPGERGAGGTPGPKGEKGEGGHRGLEGNMGRDGARGGPGPSGPPGPSGANGEKGESGSFGPAGPAGLRGPSGERGEGGPAGLPGFAGPPGSDGQSGPRGEK------GPAGGKGDVGPAGPAGPSGQSGPSGASGPAGPPGGRGDAGPSGLTGFPGAAGRVGGPGPAGIAGPPGSAGPAGKDGPRGLRGDPGPGGPQGEQGVVGPAGISGDKGPSGESGPPGAPGTAGPQGVLGPSGFVGLPGSRGDKGLPGGPGAVGEPGRLGPAGASGPRGPAGNIGMPGMTGTQGEAGREGNSGNDGPPG 931 HSP 4 Score: 58.151 bits (139), Expect = 1.344e-6 Identity = 187/413 (45.28%), Postives = 213/413 (51.57%), Query Frame = -1
Query: 2905 TGVTGPPGARGEQGPAGPVGKEGLSGAPGFVGPTGEKGDTGPPGEQGDLGDIXXXXXXXXXXXXXXXXXXXXXGNVGERGPVG---PDGMIGPPGPEGKIGSPGSPXXXXXXXXXXXXXXXXXXXXXXXXXXXGLDGKSGKPGTRGPIGPVGINGRP---GKKGELGDIGLTGPQGISGPRGKRGR---VGNPGEGGPKGSQGDQGPIGLEGRAGVLGPKGQKGDXXXXXXXXXXXXXXXXXXXXPDGVKGSRGESGPNGAPGDPGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEVGPNGPDGKSGNKG------------------AIGPTG---QPGVRGSIGNPGKDGA------LGPMGTSGMRGPPGNIGV------------EGSKGNKGPPG 3999
GV G G +GEQGPAG G +GL PG GP GE G G G GD G GP G G G G +G G QG +G RGP G PDG G PG G +G+ G G G G++G GG G KG KGE G GL+G G+ G RG GP G G G+KGE G G GP G+ GP G+RG G PG GP GS G GP G + GP G KGD G G G +G GP G GP G G RG++GP+G G PG G+ G GP GI G PG AGP G+ GP G G G GP+GE G GP G SG+KG +GP+G PG RG G PG GA LGP G SG RGP GNIG+ EG+ GN GPPG
Sbjct: 528 AGVVGNTGEKGEQGPAGAPGFQGL---PGPAGPAGEAGKAGNQGMPGDQGLPGPAGVKGERGNSGPAGSAGSQGAIGARGPAGTPGPDGGKGEPGSVGIVGAAGHQGPGGMPGERGAGGTPGPKGEKGEGGHRGLEGNMGRDGARGGPGPSGPPGPSGANGEKGESGSFGPAGPAGLRGPSGERGEGGPAGLPGFAGPPGSDGQSGPRGEK------GPAGGKGDVGPAGPAGPSGQSGPSGASGPAGPPGGRGDAGPSGLTGFPGAAGRVGGPGPAGIAGPPGSAGPAGKDGPRGLRGDPGPGGPQGEQGVVGPAGISGDKGPSGESGPPGAPGTAGPQGVLGPSGFVGLPGSRGDKGLPGGPGAVGEPGRLGPAGASGPRGPAGNIGMPGMTGTQGEAGREGNSGNDGPPG 931
BLAST of collagen vs. Smed Unigenes AA
Match: SMU15040033 (dd_smedV4_702_0_1|m.35199|m.6295) HSP 1 Score: 471.855 bits (1213), Expect = 4.323e-138 Identity = 319/397 (80.35%), Postives = 351/397 (88.41%), Query Frame = 1
Query: 7597 TSGGKGYDGQTGTSGKSGKIGAPGEKGADGKPGPNGLLGDTGLRGAKGKKGTDGTPGREGKPGPRGAKGTKGPKGVPGYPGRPGIEXXXXXXXXXXXXXXXXXXXXXXLQGPVGIFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVMAMQMRSPTKGVVYGDDPKAAELLGNNAIKNPQGTKEVPARTCKHLSSVNPQAPDGEYWIDPNGGRIEDAVKVYCKISEQKTCIKSIDNNLSIRSWNSPILNGPTWLQKLINKNEIQYSVPNNQLAFLKVYSDNAVQRVTFNCENHPIIGNEKIFNKVTAPRLLADDDSIIKMTHPKLKYSVIKDECQYSKSSEAESVIEVKDVANLLPIRDVGIHIINNRKSKFGLTIEDVCFS* 8787
TSGGKGYDGQ+GTSGKSGK+G PG+KG DGKPGP+G+LGD GLRGAKGKKG DG PGREG+PG RG+KG KGPKGVPGYPGRPG+EGDPGPPGY GPDGP GPKGPDGLQGPVGI GPRGDPGIPG IGPTG GK GG G G GPLGPPGPPGPPGG+MAMQMRSPTKGV YGDDP AAELLGNNAIKNP+GTKEVPA TCK LS +P PDGEYWIDPNGGR+ DAVKVYC+ISEQKTCIK I+N +S+RSW S NG TWL+ ++NK EIQYS+PN Q+AFLKV SD+AVQRVTF CENHPIIGNE+ NKVTAPRLLADDD+IIKMTH LKY+VIKDECQYSKSSEAES+IEV++ ANLLPIRD+G+ IINNRKSKFG+TIE+VCFS*
Sbjct: 890 TSGGKGYDGQSGTSGKSGKVGTPGDKGGDGKPGPSGVLGDVGLRGAKGKKGKDGVPGREGRPGARGSKGVKGPKGVPGYPGRPGVEGDPGPPGYPGPDGPVGPKGPDGLQGPVGIIGPRGDPGIPGPIGPTGLHGKKGGIGIMGPVGPLGPPGPPGPPGGIMAMQMRSPTKGVTYGDDPLAAELLGNNAIKNPEGTKEVPAITCKQLSVKHPNLPDGEYWIDPNGGRVNDAVKVYCRISEQKTCIKPINNEISLRSWKSHSANGHTWLKSILNKEEIQYSIPNGQIAFLKVNSDSAVQRVTFTCENHPIIGNEEKLNKVTAPRLLADDDTIIKMTHSHLKYTVIKDECQYSKSSEAESIIEVRNYANLLPIRDIGVSIINNRKSKFGVTIEEVCFS* 1286 HSP 2 Score: 471.855 bits (1213), Expect = 4.323e-138 Identity = 319/397 (80.35%), Postives = 351/397 (88.41%), Query Frame = -1
Query: 406 TSGGKGYDGQTGTSGKSGKIGAPGEKGADGKPGPNGLLGDTGLRGAKGKKGTDGTPGREGKPGPRGAKGTKGPKGVPGYPGRPGIEXXXXXXXXXXXXXXXXXXXXXGLQGPVGIFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVMAMQMRSPTKGVVYGDDPKAAELLGNNAIKNPQGTKEVPARTCKHLSSVNPQAPDGEYWIDPNGGRIEDAVKVYCKISEQKTCIKSIDNNLSIRSWNSPILNGPTWLQKLINKNEIQYSVPNNQLAFLKVYSDNAVQRVTFNCENHPIIGNEKIFNKVTAPRLLADDDSIIKMTHPKLKYSVIKDECQYSKSSEAESVIEVKDVANLLPIRDVGIHIINNRKSKFGLTIEDVCFS* 1596
TSGGKGYDGQ+GTSGKSGK+G PG+KG DGKPGP+G+LGD GLRGAKGKKG DG PGREG+PG RG+KG KGPKGVPGYPGRPG+EGDPGPPGY GPDGP GPKGPDGLQGPVGI GPRGDPGIPG IGPTG GK GG G G GPLGPPGPPGPPGG+MAMQMRSPTKGV YGDDP AAELLGNNAIKNP+GTKEVPA TCK LS +P PDGEYWIDPNGGR+ DAVKVYC+ISEQKTCIK I+N +S+RSW S NG TWL+ ++NK EIQYS+PN Q+AFLKV SD+AVQRVTF CENHPIIGNE+ NKVTAPRLLADDD+IIKMTH LKY+VIKDECQYSKSSEAES+IEV++ ANLLPIRD+G+ IINNRKSKFG+TIE+VCFS*
Sbjct: 890 TSGGKGYDGQSGTSGKSGKVGTPGDKGGDGKPGPSGVLGDVGLRGAKGKKGKDGVPGREGRPGARGSKGVKGPKGVPGYPGRPGVEGDPGPPGYPGPDGPVGPKGPDGLQGPVGIIGPRGDPGIPGPIGPTGLHGKKGGIGIMGPVGPLGPPGPPGPPGGIMAMQMRSPTKGVTYGDDPLAAELLGNNAIKNPEGTKEVPAITCKQLSVKHPNLPDGEYWIDPNGGRVNDAVKVYCRISEQKTCIKPINNEISLRSWKSHSANGHTWLKSILNKEEIQYSIPNGQIAFLKVNSDSAVQRVTFTCENHPIIGNEEKLNKVTAPRLLADDDTIIKMTHSHLKYTVIKDECQYSKSSEAESIIEVRNYANLLPIRDIGVSIINNRKSKFGVTIEEVCFS* 1286 HSP 3 Score: 376.326 bits (965), Expect = 1.759e-106 Identity = 505/663 (76.17%), Postives = 560/663 (84.46%), Query Frame = 1
Query: 4930 MLKISILSGCVFLILLFIGNSYGQFRTLNEAVGPAGIRGNXXXXXXXXXXXXXXXXXXXXXXXXXXLRXXXXXXXXXXXXXXXXXXXSTGVTGPPGARGEQGPAGPVGKEGLSGAPGFVGPTGEKGDTGPPGEQGDLGDIXXXXXXXXXXXXXXXXXXXXXXNVGERGPVGPDGMIGPPGPEGKIGSPGSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDGKSGKPGTRGPIGPVGINGRPGKKGELGDIGLTGPQGISGPRGKRGRVGNPGEGGPKGSQGDQGPIGLEGRAGVLGPKGQKGDXXXXXXXXXXXXXXXXXXXXXDGVKGSRGESGPNGAPGDPGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVGPNGPDGKSGNKGAIGPTGQPGVRGSIGNPGKDGALGPMGTSGMRGPPGNIGVEGSKGNKGPPGSRXXXXXXXXXXXXXXXXXXXSEGPVGNMXXXXXXXXXXXXXXXXXXXXXXLIGPVGYAGSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGSLGPPGPTGLKGSXXXXXXXXXXXXXXXXXSLGVIGKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDKQKPRSVGSAGIRGPIGKPGADGIPGDVGPVGKQ 6918
M K SI SG + LIL+++ SYGQFRTLNEA GP GIRGNPGK GK GPDGDPG +GPPGP GKDGLRG PG GP G AGPDGK G TG TGPPG+RGEQGP GPVGKEGL+G G+ GP+GEKGD+G GEQGD GDIGP G AGP+GPPGQSGPTGPQG VGERGP GPDG++GPPGPEG++GSPGSPGRPGE+GKKGEGGDEG+KGGKGE GKTG++GKSGKPG RGPIGPVGING+ G+KGELGDIGLTGPQG+ GPRG RG VGNPG+ GPKGSQGDQGPIGLEG+ G GPKGQKGDRGRPG GE GPLGP GPIGPDG KGSRGE GPNG+PG PG NGKPGA GPPG PG PG+AGPGGQ GP+GRPGPNGAPGPRGE+GPNGPDGKSG KG++GPTG G+RG GNPGKDG LGP+GT G+RGPPG+IG G KGN GPPGS+GKVG+AGK GP GK G++GSEGP+GN G+PGFPG +GDPG GP G +GL G VGY G+QG+ GKNG+PG GKPGK G PG+PGKPG+PGP GD G++GPPGP GLKG+PGI GVPGNYGPNG PG LG +GKQG EG +G PG GSPG GPRGPPG G+PG+AGGEGV+K KPRSVGSAGIRGP GKPG DG PGDVGP GKQ
Sbjct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core: 376.326 bits (965), Expect = 1.759e-106 Identity = 505/663 (76.17%), Postives = 560/663 (84.46%), Query Frame = -1
Query: 2275 MLKISILSGCVFLILLFIGNSYGQFRTLNEAVGPAGIRGNXXXXXXXXXXXXXXXXXXXXXXXXXGLRXXXXXXXXXXXXXXXXXXGSTGVTGPPGARGEQGPAGPVGKEGLSGAPGFVGPTGEKGDTGPPGEQGDLGDIXXXXXXXXXXXXXXXXXXXXXGNVGERGPVGPDGMIGPPGPEGKIGSPGSPXXXXXXXXXXXXXXXXXXXXXXXXXXXGLDGKSGKPGTRGPIGPVGINGRPGKKGELGDIGLTGPQGISGPRGKRGRVGNPGEGGPKGSQGDQGPIGLEGRAGVLGPKGQKGDXXXXXXXXXXXXXXXXXXXXPDGVKGSRGESGPNGAPGDPGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEVGPNGPDGKSGNKGAIGPTGQPGVRGSIGNPGKDGALGPMGTSGMRGPPGNIGVEGSKGNKGPPGSRXXXXXXXXXXXXXXXXXXGSEGPVGNMXXXXXXXXXXXXXXXXXXXXXGLIGPVGYAGSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRGSLGPPGPTGLKGSXXXXXXXXXXXXXXXXGSLGVIGKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVDKQKPRSVGSAGIRGPIGKPGADGIPGDVGPVGKQ 4263
M K SI SG + LIL+++ SYGQFRTLNEA GP GIRGNPGK GK GPDGDPG +GPPGP GKDGLRG PG GP G AGPDGK G TG TGPPG+RGEQGP GPVGKEGL+G G+ GP+GEKGD+G GEQGD GDIGP G AGP+GPPGQSGPTGPQG VGERGP GPDG++GPPGPEG++GSPGSPGRPGE+GKKGEGGDEG+KGGKGE GKTG++GKSGKPG RGPIGPVGING+ G+KGELGDIGLTGPQG+ GPRG RG VGNPG+ GPKGSQGDQGPIGLEG+ G GPKGQKGDRGRPG GE GPLGP GPIGPDG KGSRGE GPNG+PG PG NGKPGA GPPG PG PG+AGPGGQ GP+GRPGPNGAPGPRGE+GPNGPDGKSG KG++GPTG G+RG GNPGKDG LGP+GT G+RGPPG+IG G KGN GPPGS+GKVG+AGK GP GK G++GSEGP+GN G+PGFPG +GDPG GP G +GL G VGY G+QG+ GKNG+PG GKPGK G PG+PGKPG+PGP GD G++GPPGP GLKG+PGI GVPGNYGPNG PG LG +GKQG EG +G PG GSPG GPRGPPG G+PG+AGGEGV+K KPRSVGSAGIRGP GKPG DG PGDVGP GKQ
Sbjct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
BLAST of collagen vs. Smed Unigenes AA
Match: SMU15002271 (Asxlregen_comp67208_c0_seq1|m.27270|m.10319) HSP 1 Score: 270.781 bits (691), Expect = 4.437e-73 Identity = 114/232 (49.14%), Postives = 151/232 (65.09%), Query Frame = 1
Query: 8092 MRSPTKGVVYGDDPKAAELLGNNAIKNPQGTKEVPARTCKHLSSVNPQAPDGEYWIDPNGGRIEDAVKVYCKISEQKTCIKSIDNNLSIRSWNSPILNGPTWLQKLINKNEIQYSVPNNQLAFLKVYSDNAVQRVTFNCENHPIIGNEKIFNKVTAPRLLADDDSIIKMTHPKLKYSVIKDECQYSKSSEAESVIEVKDVANLLPIRDVGIHIINNRKSKFGLTIEDVCFS* 8787
+RSPTKG+ + DDP A GNNAI P+GTKEVPAR+CKHLS NP DGEYWIDPNGGR+ DAV VYC+I+ Q+TCIK I SW W Q + E +Y + N QL +LK S+ A Q+++ NC N II + + LL DDD+I+ + HPK ++ VIKDECQY K SEAE+++EV+ A+ LPI+DVG+ I ++R K G+ + +VC+S*
Sbjct: 1064 LRSPTKGLTFSDDPSVAHSFGNNAIITPRGTKEVPARSCKHLSEHNPDLSDGEYWIDPNGGRVSDAVPVYCRIATQQTCIKPISKIYKTASWFKKYQKDHVWFQTINGIGEFEYDIENYQLNYLKALSETATQQISLNCINQAIILDRQGKMSTVWTSLLGDDDTILSLQHPKRRFKVIKDECQYEKFSEAETILEVRGKASRLPIKDVGLIIDSDRSRKVGIELGEVCYS* 1295 HSP 2 Score: 270.781 bits (691), Expect = 4.437e-73 Identity = 114/232 (49.14%), Postives = 151/232 (65.09%), Query Frame = -1
Query: 406 MRSPTKGVVYGDDPKAAELLGNNAIKNPQGTKEVPARTCKHLSSVNPQAPDGEYWIDPNGGRIEDAVKVYCKISEQKTCIKSIDNNLSIRSWNSPILNGPTWLQKLINKNEIQYSVPNNQLAFLKVYSDNAVQRVTFNCENHPIIGNEKIFNKVTAPRLLADDDSIIKMTHPKLKYSVIKDECQYSKSSEAESVIEVKDVANLLPIRDVGIHIINNRKSKFGLTIEDVCFS* 1101
+RSPTKG+ + DDP A GNNAI P+GTKEVPAR+CKHLS NP DGEYWIDPNGGR+ DAV VYC+I+ Q+TCIK I SW W Q + E +Y + N QL +LK S+ A Q+++ NC N II + + LL DDD+I+ + HPK ++ VIKDECQY K SEAE+++EV+ A+ LPI+DVG+ I ++R K G+ + +VC+S*
Sbjct: 1064 LRSPTKGLTFSDDPSVAHSFGNNAIITPRGTKEVPARSCKHLSEHNPDLSDGEYWIDPNGGRVSDAVPVYCRIATQQTCIKPISKIYKTASWFKKYQKDHVWFQTINGIGEFEYDIENYQLNYLKALSETATQQISLNCINQAIILDRQGKMSTVWTSLLGDDDTILSLQHPKRRFKVIKDECQYEKFSEAETILEVRGKASRLPIKDVGLIIDSDRSRKVGIELGEVCYS* 1295 HSP 3 Score: 138.272 bits (347), Expect = 4.430e-32 Identity = 200/363 (55.10%), Postives = 238/363 (65.56%), Query Frame = 1
Query: 5191 STGVTGPPGARGEQGPAGPVGKEGLSGAPGFVGPTGEKGDTGPPGEQGDLGDIXXXXXXXXXXXXXXXXXXXXXXNVGERGPVGPDGMIGPPGPEGKIGSPGSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDGKSGKPGTRGPIGPVGINGRPGKKGELGDIGLTGPQGISGPRGKRGRVGNPGEGGPKGSQGDQGPIGLEGRAGVLGPKGQKGDXXXXXXXXXXXXXXXXXXXXXDGVKGSRGESGPNGAPGDPGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVGPNGPDGKSGNKGAIGPTGQPGVRGSIGNPGKDGALGPMGTSGMRGPPGNIGVEGSKGNKG 6279
S GV GP G RGE G AG +G EG +G G G TG+KGD G G +G G+ G G G GP G+ GP G QG GERG G DG+ G GP+G IG PG G PGE+G KG G+ GIKG KG++G GL GK+G G+ GP G G++GRPG +GE G +G GP G G RG+RG GNPG GPKGSQG++GPIG+EG+ G GPKGQKGD GRPGE G+ GP G G +GP G KGSRGESGP+G+PG+PG +G PG G G PG+ G+ G G G MG+ G NGAPGPRGE G G +G G KGA+GP G G G G PG G +G MG G+RGP G +G G KG+KG
Sbjct: 95 SHGVVGPIGPRGEPGLAGSIGPEGGTGPQGNRGLTGDKGDIGLAGLKGSNGEPGLQGPQGLRGPAGRVGPAGIQGPTGERGKQGTDGVPGSLGPQGAIGPPGQSGIPGEIGNKGIRGESGIKGAKGDSGNPGLAGKTGPSGSLGPPGYPGVDGRPGVRGEAGIVGPQGPVGKVGQRGQRGPSGNPGLSGPKGSQGEEGPIGIEGKQGSAGPKGQKGDPGRPGETGDEGPRGERGVVGPAGNKGSRGESGPDGSPGNPGTDGIPGKDGLHGNPGSQGEVGSRGSPGAMGKLGLNGAPGPRGENGVFGTNGHPGAKGAVGPKGNMGSPGVRGLPGNTGTMGVMGPGGIRGPLGPVGSPGDKGSKG 457 HSP 4 Score: 138.272 bits (347), Expect = 4.430e-32 Identity = 200/363 (55.10%), Postives = 238/363 (65.56%), Query Frame = -1
Query: 2914 STGVTGPPGARGEQGPAGPVGKEGLSGAPGFVGPTGEKGDTGPPGEQGDLGDIXXXXXXXXXXXXXXXXXXXXXGNVGERGPVGPDGMIGPPGPEGKIGSPGSPXXXXXXXXXXXXXXXXXXXXXXXXXXXGLDGKSGKPGTRGPIGPVGINGRPGKKGELGDIGLTGPQGISGPRGKRGRVGNPGEGGPKGSQGDQGPIGLEGRAGVLGPKGQKGDXXXXXXXXXXXXXXXXXXXXPDGVKGSRGESGPNGAPGDPGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEVGPNGPDGKSGNKGAIGPTGQPGVRGSIGNPGKDGALGPMGTSGMRGPPGNIGVEGSKGNKG 4002
S GV GP G RGE G AG +G EG +G G G TG+KGD G G +G G+ G G G GP G+ GP G QG GERG G DG+ G GP+G IG PG G PGE+G KG G+ GIKG KG++G GL GK+G G+ GP G G++GRPG +GE G +G GP G G RG+RG GNPG GPKGSQG++GPIG+EG+ G GPKGQKGD GRPGE G+ GP G G +GP G KGSRGESGP+G+PG+PG +G PG G G PG+ G+ G G G MG+ G NGAPGPRGE G G +G G KGA+GP G G G G PG G +G MG G+RGP G +G G KG+KG
Sbjct: 95 SHGVVGPIGPRGEPGLAGSIGPEGGTGPQGNRGLTGDKGDIGLAGLKGSNGEPGLQGPQGLRGPAGRVGPAGIQGPTGERGKQGTDGVPGSLGPQGAIGPPGQSGIPGEIGNKGIRGESGIKGAKGDSGNPGLAGKTGPSGSLGPPGYPGVDGRPGVRGEAGIVGPQGPVGKVGQRGQRGPSGNPGLSGPKGSQGEEGPIGIEGKQGSAGPKGQKGDPGRPGETGDEGPRGERGVVGPAGNKGSRGESGPDGSPGNPGTDGIPGKDGLHGNPGSQGEVGSRGSPGAMGKLGLNGAPGPRGENGVFGTNGHPGAKGAVGPKGNMGSPGVRGLPGNTGTMGVMGPGGIRGPLGPVGSPGDKGSKG 457 HSP 5 Score: 68.5514 bits (166), Expect = 6.326e-11 Identity = 151/398 (37.94%), Postives = 185/398 (46.48%), Query Frame = 1
Query: 5197 GVTGPPGARGEQGPAGPVGKEGLSGAPGFVGPTGEKGDTGPPGEQGDLGDIXXXXXXXXXXXXXXXXXXXXXXNVGERGPVGPDGMIGPPGPEGKIGSPGSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDGKSGKPGTRGPIGPVGINGRPGKKGELGDIGLTGPQGISGPRGKRGRVGNPGEGGPKGSQGDQGPIGLEGRAGVLGPKGQKGDXXXXXXXXXXXXXXXXXXXXXDGVKGSRGESGPNGAPGDPGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVGPNGPDGKSGN---------------KGAIGPTGQPGVRGSI---GNPGKDGALGPMGTSGMRGPP---------------GNIGVEGSKGNKGPPGS 6291
G++GP G++GE+GP G GK+G +G P G+KGD G PGE GD G GERG VGP G G G G GSPG+PG G GK G G+ G G+ G G+ G +G +G+NG PG +GE G G G G G G +G +G+PG G G+ G G +G G G LGP G GD+G G G G G G +G G G G GP+G+PG G PG AG GQ GP+G GP G G G G NG DGK+G KG+IGP G+ G+ G I G G DG +GP GT GM GPP G +G+ GS+G GP GS
Sbjct: 280 GLSGPKGSQGEEGPIGIEGKQGSAG------PKGQKGDPGRPGETGDEGP------------------------RGERGVVGPAGNKGSRGESGPDGSPGNPGTDGIPGKDGLHGNPGS------------QGEVGSRGSPGAMGKLGLNGAPGPRGENGVFGTNGHPGAKGAVGPKGNMGSPGVRGLPGNTGTMGVMGPGGIRGPLGPVGSPGDKGSKGRTGITGVAGDSGDLGEQGPPGEDGSEGPSGSPGPMGF---------------PGIAGKIGQPGPIGPDGPPGPAGFEGTPGTNGKDGKAGKDGKPGPPGEVGPPGVKGSIGPVGETGLMGKIGLRGPKGLDGIMGPPGTFGMNGPPGPSGEAGPSGAPGKLGPVGITGSRGRPGPIGS 620 HSP 6 Score: 68.5514 bits (166), Expect = 6.326e-11 Identity = 151/398 (37.94%), Postives = 185/398 (46.48%), Query Frame = -1
Query: 2902 GVTGPPGARGEQGPAGPVGKEGLSGAPGFVGPTGEKGDTGPPGEQGDLGDIXXXXXXXXXXXXXXXXXXXXXGNVGERGPVGPDGMIGPPGPEGKIGSPGSPXXXXXXXXXXXXXXXXXXXXXXXXXXXGLDGKSGKPGTRGPIGPVGINGRPGKKGELGDIGLTGPQGISGPRGKRGRVGNPGEGGPKGSQGDQGPIGLEGRAGVLGPKGQKGDXXXXXXXXXXXXXXXXXXXXPDGVKGSRGESGPNGAPGDPGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEVGPNGPDGKSGN---------------KGAIGPTGQPGVRGSI---GNPGKDGALGPMGTSGMRGPP---------------GNIGVEGSKGNKGPPGS 3996
G++GP G++GE+GP G GK+G +G P G+KGD G PGE GD G GERG VGP G G G G GSPG+PG G GK G G+ G G+ G G+ G +G +G+NG PG +GE G G G G G G +G +G+PG G G+ G G +G G G LGP G GD+G G G G G G +G G G G GP+G+PG G PG AG GQ GP+G GP G G G G NG DGK+G KG+IGP G+ G+ G I G G DG +GP GT GM GPP G +G+ GS+G GP GS
Sbjct: 280 GLSGPKGSQGEEGPIGIEGKQGSAG------PKGQKGDPGRPGETGDEGP------------------------RGERGVVGPAGNKGSRGESGPDGSPGNPGTDGIPGKDGLHGNPGS------------QGEVGSRGSPGAMGKLGLNGAPGPRGENGVFGTNGHPGAKGAVGPKGNMGSPGVRGLPGNTGTMGVMGPGGIRGPLGPVGSPGDKGSKGRTGITGVAGDSGDLGEQGPPGEDGSEGPSGSPGPMGF---------------PGIAGKIGQPGPIGPDGPPGPAGFEGTPGTNGKDGKAGKDGKPGPPGEVGPPGVKGSIGPVGETGLMGKIGLRGPKGLDGIMGPPGTFGMNGPPGPSGEAGPSGAPGKLGPVGITGSRGRPGPIGS 620 HSP 7 Score: 64.6994 bits (156), Expect = 1.147e-9 Identity = 94/246 (38.21%), Postives = 115/246 (46.75%), Query Frame = 1
Query: 5587 LDGKSGKPGTRGPIGPVGINGRPGKKGELGDIGLTGPQGISGPRGKRGRV------GNPGEGGPKGSQGDQGPIGLEGRAGVLGPKGQKGDXXXXXXXXXXXXXXXXXXXXXDGV------KGSRGESGPNGAPGD---PGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVGPNGPDGKSGNKGAIGPTGQPGVRGSIGNPGKDGALGPMGTSGMRGPPGNIGVEGSKGNKG 6279
+ GK G PG+ G +GP+G G PG G +G G TGPQG G G +G + G+ GE G +G QG +GP G G AG+ GP G++G +G G G GP G IGP G G+ KG RGESG GA GD PGL G GP G G G G G+PGVRG G G G +G +G G RGP GN G+ G KG++G
Sbjct: 86 IPGKDGTPGSHGVVGPIGPRGEPGLAGSIGPEGGTGPQGNRGLTGDKGDIGLAGLKGSNGEPGLQGPQGLRGPAGRVGPAGIQGPTGERGKQGTDGVPGSLGPQGAIGPPGQSGIPGEIGNKGIRGESGIKGAKGDSGNPGL------------------------------------------AGKTGPSGSLGPPGYPGVDGRPGVRGEAGIVGPQGPVGKVGQRGQRGPSGNPGLSGPKGSQG 289 HSP 8 Score: 64.6994 bits (156), Expect = 1.147e-9 Identity = 94/246 (38.21%), Postives = 115/246 (46.75%), Query Frame = -1
Query: 2914 LDGKSGKPGTRGPIGPVGINGRPGKKGELGDIGLTGPQGISGPRGKRGRV------GNPGEGGPKGSQGDQGPIGLEGRAGVLGPKGQKGDXXXXXXXXXXXXXXXXXXXXPDGV------KGSRGESGPNGAPGD---PGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEVGPNGPDGKSGNKGAIGPTGQPGVRGSIGNPGKDGALGPMGTSGMRGPPGNIGVEGSKGNKG 3606
+ GK G PG+ G +GP+G G PG G +G G TGPQG G G +G + G+ GE G +G QG +GP G G AG+ GP G++G +G G G GP G IGP G G+ KG RGESG GA GD PGL G GP G G G G G+PGVRG G G G +G +G G RGP GN G+ G KG++G
Sbjct: 86 IPGKDGTPGSHGVVGPIGPRGEPGLAGSIGPEGGTGPQGNRGLTGDKGDIGLAGLKGSNGEPGLQGPQGLRGPAGRVGPAGIQGPTGERGKQGTDGVPGSLGPQGAIGPPGQSGIPGEIGNKGIRGESGIKGAKGDSGNPGL------------------------------------------AGKTGPSGSLGPPGYPGVDGRPGVRGEAGIVGPQGPVGKVGQRGQRGPSGNPGLSGPKGSQG 289 HSP 9 Score: 55.4546 bits (132), Expect = 7.197e-7 Identity = 161/388 (41.49%), Postives = 191/388 (49.23%), Query Frame = 1
Query: 5197 GVTGPPGARGEQGPAGPVGKEGLSGAPGFVGPTGEKGDTGPPGEQGDLGDIXXXXXXXXXXXXXXXXXXXXXXNVGERGPVGPDGMIGPPGPEGKIGSPGSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDGKSGKP------------GTRGPIGPVGINGRPGKKGELGDIGLTGPQ---GISGPRGKRGRVGNP---GEGGPKGSQGDQGPIGLEGRAGVLGPKGQKGDXXXXXXXXXXXXXXXXXXXXXDGVKGSRGESGPNGAPGDPGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVGPNGPDGKSGNKGAIGP------TGQPGVRGSIGNPGKDGALGPMGTS---GMRGPPGNIGVEGSKGNKG 6279
G G PGA+G GP G +G G+ G PG TG G GP G +G LG +G PG G G G +G G G++GE+GP G DG GP G G +G PG G+ G+ G G G G G +G G G DGK+GK G +G IGPV G+ G +G IGL GP+ GI GP G G G P GE GP G+ G GP+G+ G G GP G G+ G G G P+ GV G RGE G+PGD GL G G GPPG G G G G G G G G G GE G G DG G G GP TG+ G +G G PG GA GP G+S G +GP G IG G +G +G
Sbjct: 400 GTNGHPGAKGAVGPKGNMGSPGVRGLPGN---TGTMGVMGPGGIRGPLGPVGSPGDKGSKGRTGITGVAGDSGDLGEQGPPGEDGSEGPSGSPGPMGFPGIAGKIGQPGPIGPDGPPGPAGFEGTPGTNGKDGKAGKDGKPGPPGEVGPPGVKGSIGPV------GETGLMGKIGLRGPKGLDGIMGPPGTFGMNGPPGPSGEAGPSGAPGKLGPVGITGSRGRPGPIGSSGEPGEKGPQGLPEVEKPLAGRSVGGVSGPRGE---RGSPGDDGLPGPNGDPGPPGPIGMDGGRGDTGDRGLPGPAGDPGKDGKPGEPGTPGIDGPPGQVGPEGPRGPSGETGEQGPQGLPGKPGDPGAEGPRGSSGKQGFQGPTGPIGPTGKQGKQG 775 HSP 10 Score: 55.4546 bits (132), Expect = 7.197e-7 Identity = 161/388 (41.49%), Postives = 191/388 (49.23%), Query Frame = -1
Query: 2914 GVTGPPGARGEQGPAGPVGKEGLSGAPGFVGPTGEKGDTGPPGEQGDLGDIXXXXXXXXXXXXXXXXXXXXXGNVGERGPVGPDGMIGPPGPEGKIGSPGSPXXXXXXXXXXXXXXXXXXXXXXXXXXXGLDGKSGKP------------GTRGPIGPVGINGRPGKKGELGDIGLTGPQ---GISGPRGKRGRVGNP---GEGGPKGSQGDQGPIGLEGRAGVLGPKGQKGDXXXXXXXXXXXXXXXXXXXXPDGVKGSRGESGPNGAPGDPGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEVGPNGPDGKSGNKGAIGP------TGQPGVRGSIGNPGKDGALGPMGTS---GMRGPPGNIGVEGSKGNKG 3996
G G PGA+G GP G +G G+ G PG TG G GP G +G LG +G PG G G G +G G G++GE+GP G DG GP G G +G PG G+ G+ G G G G G +G G G DGK+GK G +G IGPV G+ G +G IGL GP+ GI GP G G G P GE GP G+ G GP+G+ G G GP G G+ G G G P+ GV G RGE G+PGD GL G G GPPG G G G G G G G G G GE G G DG G G GP TG+ G +G G PG GA GP G+S G +GP G IG G +G +G
Sbjct: 400 GTNGHPGAKGAVGPKGNMGSPGVRGLPGN---TGTMGVMGPGGIRGPLGPVGSPGDKGSKGRTGITGVAGDSGDLGEQGPPGEDGSEGPSGSPGPMGFPGIAGKIGQPGPIGPDGPPGPAGFEGTPGTNGKDGKAGKDGKPGPPGEVGPPGVKGSIGPV------GETGLMGKIGLRGPKGLDGIMGPPGTFGMNGPPGPSGEAGPSGAPGKLGPVGITGSRGRPGPIGSSGEPGEKGPQGLPEVEKPLAGRSVGGVSGPRGE---RGSPGDDGLPGPNGDPGPPGPIGMDGGRGDTGDRGLPGPAGDPGKDGKPGEPGTPGIDGPPGQVGPEGPRGPSGETGEQGPQGLPGKPGDPGAEGPRGSSGKQGFQGPTGPIGPTGKQGKQG 775
BLAST of collagen vs. Smed Unigenes AA
Match: SMU15036469 (dd_smedV4_1070_0_1|m.1593|m.7941) HSP 1 Score: 207.223 bits (526), Expect = 3.422e-53 Identity = 93/239 (38.91%), Postives = 135/239 (56.49%), Query Frame = 1
Query: 8077 VMAMQMRSPTKGVVYGDDPKAAELLGNNAIKNPQGTKEVPARTCKHLSSVNPQAPDGEYWIDPNGGRIEDAVKVYCKISEQKTCIKSIDNNLSIRSWNSPILNGPTWLQKLINKNEIQYSVPNNQLAFLKVYSDNAVQRVTFNCENHPIIGNEKIFNKVTAPRLLADDDSIIKMTHPKLKYSVIKDECQYSKSSEAESVIEVKDVANLLPIRDVGIHIINNR--KSKFGLTIEDVCFS* 8787
V M R ++ DDP A+ LGN+AI P GT PAR+C HL+ +NP PDG YWIDPNGG+I+DAV+VYCKI E+KTCIK + + ++ P N W + + I YS+ Q+ FLK+ S+ A Q +T NC N P+ I N V R+ D+D I+ + Y V++D CQ++ + + +E+ LPI+D+ + +N R +S+ IE+VCF *
Sbjct: 1066 VATMSNRQQGYMIIQADDPLIAKYLGNDAISKPLGTSNSPARSCLHLAEMNPSFPDGIYWIDPNGGKIDDAVQVYCKIKEKKTCIKPLVFKIQLQ---KPKFN---WFSQSNDNKFISYSLDQQQMTFLKMISNKASQFITINCRNMPV-----IKNSVKPLRIFTDNDIILDSSDQIFSYKVLEDNCQHNSQDLSSTRLEITSRPTRLPIKDIEVDTVNVRSERSQIEYNIEEVCFY* 1293 HSP 2 Score: 207.223 bits (526), Expect = 3.422e-53 Identity = 93/239 (38.91%), Postives = 135/239 (56.49%), Query Frame = -1
Query: 406 VMAMQMRSPTKGVVYGDDPKAAELLGNNAIKNPQGTKEVPARTCKHLSSVNPQAPDGEYWIDPNGGRIEDAVKVYCKISEQKTCIKSIDNNLSIRSWNSPILNGPTWLQKLINKNEIQYSVPNNQLAFLKVYSDNAVQRVTFNCENHPIIGNEKIFNKVTAPRLLADDDSIIKMTHPKLKYSVIKDECQYSKSSEAESVIEVKDVANLLPIRDVGIHIINNR--KSKFGLTIEDVCFS* 1116
V M R ++ DDP A+ LGN+AI P GT PAR+C HL+ +NP PDG YWIDPNGG+I+DAV+VYCKI E+KTCIK + + ++ P N W + + I YS+ Q+ FLK+ S+ A Q +T NC N P+ I N V R+ D+D I+ + Y V++D CQ++ + + +E+ LPI+D+ + +N R +S+ IE+VCF *
Sbjct: 1066 VATMSNRQQGYMIIQADDPLIAKYLGNDAISKPLGTSNSPARSCLHLAEMNPSFPDGIYWIDPNGGKIDDAVQVYCKIKEKKTCIKPLVFKIQLQ---KPKFN---WFSQSNDNKFISYSLDQQQMTFLKMISNKASQFITINCRNMPV-----IKNSVKPLRIFTDNDIILDSSDQIFSYKVLEDNCQHNSQDLSSTRLEITSRPTRLPIKDIEVDTVNVRSERSQIEYNIEEVCFY* 1293 HSP 3 Score: 58.151 bits (139), Expect = 8.766e-8 Identity = 101/238 (42.44%), Postives = 120/238 (50.42%), Query Frame = 1
Query: 5191 STGVTGPPGARGEQGPAGPV---GKEGLSGAPGFVGPTGEKGDTGPPGEQGDLGDIXXXXXXXXXXXXXXXXXXXXXXNVGERGPVGPDGMIGPPGP---EGKIGSPGSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDGKSGKPGT------RGPIGPVGINGRPGK------KGELGDIGLTGPQGISGPRGKRGRVGNPGEGGPKGSQGDQGPI---GLEGRAGVLGPKGQKGD 5841
S G GP G G GP GPV G +G G G GP GEKG GP G GD+G +G PG G +G GP G GP GP +G G PG PG G G G G G G KG AGK G+ G SG PG+ GPIG GI G GK KGE G +GL GPQG+SGP G +G +G PG G KG++G GP+ G G G++G G++G+
Sbjct: 105 SIGAPGPVGPDGPSGPTGPVGMPGNQGPDGPSGSKGPVGEKGPDGPQGNPGDIGVLGLPGPP------------------GHKGAPGPSGRQGPQGPRGLQGVDGLPGQPGPLGPQGVPGPPGMMGPTGVKGYAGKQGVLGSSGDPGSPGVNGAPGPIGQPGIMGSRGKDGPIGIKGENGPLGLLGPQGLSGPPGLQGSLGPPGPQGSKGNEGKIGPVGPAGSPGSPGLIGEIGERGE 324 HSP 4 Score: 58.151 bits (139), Expect = 8.766e-8 Identity = 101/238 (42.44%), Postives = 120/238 (50.42%), Query Frame = -1
Query: 3352 STGVTGPPGARGEQGPAGPV---GKEGLSGAPGFVGPTGEKGDTGPPGEQGDLGDIXXXXXXXXXXXXXXXXXXXXXGNVGERGPVGPDGMIGPPGP---EGKIGSPGSPXXXXXXXXXXXXXXXXXXXXXXXXXXXGLDGKSGKPGT------RGPIGPVGINGRPGK------KGELGDIGLTGPQGISGPRGKRGRVGNPGEGGPKGSQGDQGPI---GLEGRAGVLGPKGQKGD 4002
S G GP G G GP GPV G +G G G GP GEKG GP G GD+G +G PG G +G GP G GP GP +G G PG PG G G G G G G KG AGK G+ G SG PG+ GPIG GI G GK KGE G +GL GPQG+SGP G +G +G PG G KG++G GP+ G G G++G G++G+
Sbjct: 105 SIGAPGPVGPDGPSGPTGPVGMPGNQGPDGPSGSKGPVGEKGPDGPQGNPGDIGVLGLPGPP------------------GHKGAPGPSGRQGPQGPRGLQGVDGLPGQPGPLGPQGVPGPPGMMGPTGVKGYAGKQGVLGSSGDPGSPGVNGAPGPIGQPGIMGSRGKDGPIGIKGENGPLGLLGPQGLSGPPGLQGSLGPPGPQGSKGNEGKIGPVGPAGSPGSPGLIGEIGERGE 324 HSP 5 Score: 56.6102 bits (135), Expect = 2.826e-7 Identity = 102/240 (42.50%), Postives = 121/240 (50.42%), Query Frame = 1
Query: 5593 GKSGKPGTRGPIGPVGINGRPGKKGELGDIGLTGPQGISGPRGKRGRVGNPGEGGPKGSQGDQGPIGLEGRAGVLGPKGQKGDXXXXXXXXXXXXXXXXXXXXXDGVKGSRGESGPNGAPGDPGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVGPNGPDGKSGNKGAIGPTGQPGVRGS------IGNPGKDGALGPMGTSGMRGPPGNIGVEGSKGNKGPPGSR 6294
GK G G G IGP GING+PG G +G G GP G SGP G VG PG GP G G +GP+G +G G P+G GD G G G G G GP G G +G RG G +G PG PG G G G G MG G G G +G +G +G G G GA GP GQPG+ GS IG G++G LG +G G+ GPP G++GS G GP GS+
Sbjct: 80 GKDGPQGVLGLIGPTGINGKPGVDGSIGAPGPVGPDGPSGPTGP---VGMPGNQGPDGPSGSKGPVGEKGPDG---PQGNPGDIGVLGLPGPPGHKGAPGPSGRQGPQGPRGLQGVDGLPGQ---------------PGPLGPQGVPGPPGMMGPTGVKGYAGKQGVLGSSGDPGSPGVNGAPGPIGQPGIMGSRGKDGPIGIKGENGPLGLLGPQGLSGPP---GLQGSLGPPGPQGSK 295 HSP 6 Score: 56.6102 bits (135), Expect = 2.826e-7 Identity = 102/240 (42.50%), Postives = 121/240 (50.42%), Query Frame = -1
Query: 2899 GKSGKPGTRGPIGPVGINGRPGKKGELGDIGLTGPQGISGPRGKRGRVGNPGEGGPKGSQGDQGPIGLEGRAGVLGPKGQKGDXXXXXXXXXXXXXXXXXXXXPDGVKGSRGESGPNGAPGDPGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEVGPNGPDGKSGNKGAIGPTGQPGVRGS------IGNPGKDGALGPMGTSGMRGPPGNIGVEGSKGNKGPPGSR 3600
GK G G G IGP GING+PG G +G G GP G SGP G VG PG GP G G +GP+G +G G P+G GD G G G G G GP G G +G RG G +G PG PG G G G G MG G G G +G +G +G G G GA GP GQPG+ GS IG G++G LG +G G+ GPP G++GS G GP GS+
Sbjct: 80 GKDGPQGVLGLIGPTGINGKPGVDGSIGAPGPVGPDGPSGPTGP---VGMPGNQGPDGPSGSKGPVGEKGPDG---PQGNPGDIGVLGLPGPPGHKGAPGPSGRQGPQGPRGLQGVDGLPGQ---------------PGPLGPQGVPGPPGMMGPTGVKGYAGKQGVLGSSGDPGSPGVNGAPGPIGQPGIMGSRGKDGPIGIKGENGPLGLLGPQGLSGPP---GLQGSLGPPGPQGSK 295 HSP 7 Score: 54.299 bits (129), Expect = 1.497e-6 Identity = 156/416 (37.50%), Postives = 182/416 (43.75%), Query Frame = 1
Query: 5197 GVTGPPGARGEQGPAGPVGKEGLSGAPG---------------FVGPTGEKGDTGPPGEQGDLGDIXXXXXXXXXXXXXXXXXXXXXXNVGERGPVG------------PDGMIGPPGPEGKIGSPGSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDGKSGKPGTRGPIGPVGINGRPGKKGELGDIGLTGPQGISGPRGKRGRVGNPGEGGPKGSQGDQGPIG---------------LEGRAGVLGPKGQKGDXXXXXXXXXXXXXXXXXXXXXDGVKGSRGESGPNGAPGDPGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVGPNGPDGKSGNKG---------AIGPTGQPGVRGSIGNPGKDGALGPMGTSGMRGPPGNIGVEGSKGNKGPPGS 6291
G G PG G QGP GP G +G+ G PG +GPTG KG G +QG LG G PG G G PG G G G+ G+ GP+G P G+ GPPG +G +G PG G G G IGPVG G PG G +G+IG RG+ G GNPG GP+G +G GP G ++G G+ G KG+ GD PG LG GP G G G DG +G RG GPNG G PG G+ G G G G G G G G G GP G PGPRG+ GP G G G KG G G+PGV G G G +G LGP G G GP G G EG+ G G PG+
Sbjct: 167 GHKGAPGPSGRQGPQGPRGLQGVDGLPGQPGPLGPQGVPGPPGMMGPTGVKGYAG---KQGVLGSSGDPGSPGVNGAPGPIGQPGIMGSRGKDGPIGIKGENGPLGLLGPQGLSGPPGLQGSLGPPGP---------------------------------QGSKGNEGKIGPVGPAGSPGSPGLIGEIGE---------RGENGPFGNPGPQGPRGLRGSAGPKGVSGPVGPPGMPGNPGIDGMPGIRGLKGKDGD---PGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDPGQPGPAGPMGPPGPRGQRGPTGNPGNLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGT 534 HSP 8 Score: 54.299 bits (129), Expect = 1.497e-6 Identity = 156/416 (37.50%), Postives = 182/416 (43.75%), Query Frame = -1
Query: 2902 GVTGPPGARGEQGPAGPVGKEGLSGAPG---------------FVGPTGEKGDTGPPGEQGDLGDIXXXXXXXXXXXXXXXXXXXXXGNVGERGPVG------------PDGMIGPPGPEGKIGSPGSPXXXXXXXXXXXXXXXXXXXXXXXXXXXGLDGKSGKPGTRGPIGPVGINGRPGKKGELGDIGLTGPQGISGPRGKRGRVGNPGEGGPKGSQGDQGPIG---------------LEGRAGVLGPKGQKGDXXXXXXXXXXXXXXXXXXXXPDGVKGSRGESGPNGAPGDPGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEVGPNGPDGKSGNKG---------AIGPTGQPGVRGSIGNPGKDGALGPMGTSGMRGPPGNIGVEGSKGNKGPPGS 3996
G G PG G QGP GP G +G+ G PG +GPTG KG G +QG LG G PG G G PG G G G+ G+ GP+G P G+ GPPG +G +G PG G G G IGPVG G PG G +G+IG RG+ G GNPG GP+G +G GP G ++G G+ G KG+ GD PG LG GP G G G DG +G RG GPNG G PG G+ G G G G G G G G G GP G PGPRG+ GP G G G KG G G+PGV G G G +G LGP G G GP G G EG+ G G PG+
Sbjct: 167 GHKGAPGPSGRQGPQGPRGLQGVDGLPGQPGPLGPQGVPGPPGMMGPTGVKGYAG---KQGVLGSSGDPGSPGVNGAPGPIGQPGIMGSRGKDGPIGIKGENGPLGLLGPQGLSGPPGLQGSLGPPGP---------------------------------QGSKGNEGKIGPVGPAGSPGSPGLIGEIGE---------RGENGPFGNPGPQGPRGLRGSAGPKGVSGPVGPPGMPGNPGIDGMPGIRGLKGKDGD---PGSLGAMGPPGRQGVSGRDGPRGERGYPGPNGQDGSPGAIGEIGQRGKLGSQGETGLPGNVGDPGQPGPAGPMGPPGPRGQRGPTGNPGNLGEKGDNGPPGPLGPQGSRGKPGVVGKPGQQGSEGKLGPEGLVGNLGPAGQPGKEGTPGPDGKPGT 534 HSP 9 Score: 53.5286 bits (127), Expect = 2.242e-6 Identity = 69/147 (46.94%), Postives = 83/147 (56.46%), Query Frame = 1
Query: 5416 NVGERGP---VGPDGMIGPPGPEGKIGSPGSPX------XXXXXXXXXXXXXXXXXXXXXXXXXXXLDGKSGKPGTRGPIGPVGINGRPGKKGELGDIGLTGPQGISGPRGKRGRVGNPGEGGPKGSQGDQGPIGLEGRAGVLGPKG 5829
N G++GP GPDG++GP GP GK G PG G + G+VGK G G G G G G GL G++GKPG GP+GP G GRPG G G GL GP G SG GK+G G+ G GP+G GD G G +G G G +G
Sbjct: 682 NPGKQGPPGEAGPDGLLGPMGPPGKDGKPGEDGNLGPIGKTGKVGKDGPPGPPGPTGDVGPIGPNGLPGQNGKPGKAGPLGPTGPVGRPGSDGIRGPNGLRGPTGKSGADGKKGPAGDDGPPGPQGEAGDMGSPGQDGPPGNQGNRG 828 HSP 10 Score: 53.5286 bits (127), Expect = 2.242e-6 Identity = 69/147 (46.94%), Postives = 83/147 (56.46%), Query Frame = -1
Query: 3364 NVGERGP---VGPDGMIGPPGPEGKIGSPGSPX------XXXXXXXXXXXXXXXXXXXXXXXXXXGLDGKSGKPGTRGPIGPVGINGRPGKKGELGDIGLTGPQGISGPRGKRGRVGNPGEGGPKGSQGDQGPIGLEGRAGVLGPKG 3777
N G++GP GPDG++GP GP GK G PG G + G+VGK G G G G G G GL G++GKPG GP+GP G GRPG G G GL GP G SG GK+G G+ G GP+G GD G G +G G G +G
Sbjct: 682 NPGKQGPPGEAGPDGLLGPMGPPGKDGKPGEDGNLGPIGKTGKVGKDGPPGPPGPTGDVGPIGPNGLPGQNGKPGKAGPLGPTGPVGRPGSDGIRGPNGLRGPTGKSGADGKKGPAGDDGPPGPQGEAGDMGSPGQDGPPGNQGNRG 828
BLAST of collagen vs. Smed Unigenes AA
Match: SMU15029208 (SmedSxlregen_c102983_g1_i1|m.43148|m.11576) HSP 1 Score: 181.415 bits (459), Expect = 2.533e-45 Identity = 81/226 (35.84%), Postives = 130/226 (57.52%), Query Frame = 1
Query: 8116 VYGDDPKAAELLGNNAIKNPQGTKEVPARTCKHLSSVNPQAPDGEYWIDPNGGRIEDAVKVYCKISEQKTCIKSIDNNLSIRSWN-SPILNGPTWLQKLINKNEIQYSVPNNQLAFLKVYSDNAVQRVTFNCENHPIIGNEKIFNKVTAPRLLADDDSIIKMTHPKLKYSVIKDECQYSKSSEAESVIEVKDVANLLPIRDVGIHIINNR-KSKFGLTIEDVCFS* 8787
+ DD A + LG++ +K P GTK++PARTCK L NP DG Y+IDPNGG+ +DA +V C+ +++CI+ + ++ W+ S + +W ++ + Y + +QL FLK++S NA QR+T NC ++GN + + V L +D D + KYSVI+D C+ S + +E+ A LPIRD+ ++ +++ + +FGL I VCFS*
Sbjct: 1099 LLNDDALAVKYLGSDVVKKPLGTKDIPARTCKQLLDANPNLQDGFYYIDPNGGKADDAFRVLCRSQRKESCIEPKSPSYKLKHWDASDVTEYRSWFGEITGTFKFDYQIEASQLMFLKLFSTNARQRITINCSRLSVVGNSE--HPVI---LYSDHDEEVLRNGDLFKYSVIRDGCKNSAEIIDSTELEMDTEAIRLPIRDIALNTGSSKEQQQFGLDIGQVCFS* 1319 HSP 2 Score: 181.415 bits (459), Expect = 2.533e-45 Identity = 81/226 (35.84%), Postives = 130/226 (57.52%), Query Frame = -1
Query: 406 VYGDDPKAAELLGNNAIKNPQGTKEVPARTCKHLSSVNPQAPDGEYWIDPNGGRIEDAVKVYCKISEQKTCIKSIDNNLSIRSWN-SPILNGPTWLQKLINKNEIQYSVPNNQLAFLKVYSDNAVQRVTFNCENHPIIGNEKIFNKVTAPRLLADDDSIIKMTHPKLKYSVIKDECQYSKSSEAESVIEVKDVANLLPIRDVGIHIINNR-KSKFGLTIEDVCFS* 1077
+ DD A + LG++ +K P GTK++PARTCK L NP DG Y+IDPNGG+ +DA +V C+ +++CI+ + ++ W+ S + +W ++ + Y + +QL FLK++S NA QR+T NC ++GN + + V L +D D + KYSVI+D C+ S + +E+ A LPIRD+ ++ +++ + +FGL I VCFS*
Sbjct: 1099 LLNDDALAVKYLGSDVVKKPLGTKDIPARTCKQLLDANPNLQDGFYYIDPNGGKADDAFRVLCRSQRKESCIEPKSPSYKLKHWDASDVTEYRSWFGEITGTFKFDYQIEASQLMFLKLFSTNARQRITINCSRLSVVGNSE--HPVI---LYSDHDEEVLRNGDLFKYSVIRDGCKNSAEIIDSTELEMDTEAIRLPIRDIALNTGSSKEQQQFGLDIGQVCFS* 1319 HSP 3 Score: 68.9366 bits (167), Expect = 5.894e-11 Identity = 140/373 (37.53%), Postives = 168/373 (45.04%), Query Frame = 1
Query: 5197 GVTGPPGARGEQGPAGPVGKEGL------------SGAPGFVGPTGEKGDTGPPGEQGDLGDIXXXXXXXXXXXXXXXXXXXXXXNVGERGPVGPDGMIGPPGPEGKIGSPGSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDGKSGKPGTRGPIGPVGINGRPGKKGELGDIGLTGPQGISGPRGKRGRVGNPGEGGPKGSQGDQGPIGLEGRAGVLGPKGQKGDXXXXXXXXXXXXXXXXXXXXXDGVKGSRGESGPNGAPGDPGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVGPNGPDGKSGNKGAIGPTGQPGVRGSIGNPGKDGALGPMGTSGMRGPPGNIGVEGSKGNKG 6279
G TG PG RG G GPVG G G PG GP G G GP GE+G G +G G ++G+ G G DG G PG G G G G G G G+ G+ G G +G G G G G+ G++G IGP+G +G PG +G G IG G QG G RG +G +G+PG G GS+G QG IG+ G G G G+ G G PG+ G G GP+GPIG G G G+ GP G PG PG N + GP GP G+ G G G G PG G G G G +GP G SG RG PG+ G G+KGNKG
Sbjct: 183 GPTGAPGRRGTVGSPGPVGNAGHPGVQGISGRPGNQGEPGMQGPPGLPGLRGPEGEKGSQGGLGIKG------------------SIGQDGYPGSDGKRGAPGEHGDPGKAGIDGPSGVKGDPGKTGNPGRSGRRGPRGPRGNRGIIGELGSKGDIGPMGPSGSPGLRGNPGVIGSLGSQGFPGARGPQGILGSPGPRGRTGSKGSQGTIGIAGVPGTPGKDGKAGQVGIPGKNGPPGRPGPVGPIGLPGHPGKDGKPGPAGFPGTPGKN---------------------------------------MQPGPQGPLGERGPPGKSGDDGVPGNVGPPGQSGLQGPIGPPGNSGQRGLPGSNGPSGTKGNKG 498 HSP 4 Score: 68.9366 bits (167), Expect = 5.894e-11 Identity = 140/373 (37.53%), Postives = 168/373 (45.04%), Query Frame = -1
Query: 2914 GVTGPPGARGEQGPAGPVGKEGL------------SGAPGFVGPTGEKGDTGPPGEQGDLGDIXXXXXXXXXXXXXXXXXXXXXGNVGERGPVGPDGMIGPPGPEGKIGSPGSPXXXXXXXXXXXXXXXXXXXXXXXXXXXGLDGKSGKPGTRGPIGPVGINGRPGKKGELGDIGLTGPQGISGPRGKRGRVGNPGEGGPKGSQGDQGPIGLEGRAGVLGPKGQKGDXXXXXXXXXXXXXXXXXXXXPDGVKGSRGESGPNGAPGDPGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEVGPNGPDGKSGNKGAIGPTGQPGVRGSIGNPGKDGALGPMGTSGMRGPPGNIGVEGSKGNKG 3996
G TG PG RG G GPVG G G PG GP G G GP GE+G G +G G ++G+ G G DG G PG G G G G G G G+ G+ G G +G G G G G+ G++G IGP+G +G PG +G G IG G QG G RG +G +G+PG G GS+G QG IG+ G G G G+ G G PG+ G G GP+GPIG G G G+ GP G PG PG N + GP GP G+ G G G G PG G G G G +GP G SG RG PG+ G G+KGNKG
Sbjct: 183 GPTGAPGRRGTVGSPGPVGNAGHPGVQGISGRPGNQGEPGMQGPPGLPGLRGPEGEKGSQGGLGIKG------------------SIGQDGYPGSDGKRGAPGEHGDPGKAGIDGPSGVKGDPGKTGNPGRSGRRGPRGPRGNRGIIGELGSKGDIGPMGPSGSPGLRGNPGVIGSLGSQGFPGARGPQGILGSPGPRGRTGSKGSQGTIGIAGVPGTPGKDGKAGQVGIPGKNGPPGRPGPVGPIGLPGHPGKDGKPGPAGFPGTPGKN---------------------------------------MQPGPQGPLGERGPPGKSGDDGVPGNVGPPGQSGLQGPIGPPGNSGQRGLPGSNGPSGTKGNKG 498 HSP 5 Score: 68.5514 bits (166), Expect = 6.148e-11 Identity = 150/365 (41.10%), Postives = 174/365 (47.67%), Query Frame = 1
Query: 5197 GVTGPPGARGEQGPAGPVGKEGLSGAPGFVGPTGEKGDTGPPGEQGDLGDIXXXXXXXXXXXXXXXXXXXXXXNVGERGPVGPDGMIGPPGPEGKIGSPGSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDGKSGKPGTRGPIGPVGINGRPGKKGELGDIGLTGPQGISGPRGKRGRVGNPGEGGPKGSQGDQGPIGLEGRAGVLGPKGQKGDXXXXXXXXXXXXXXXXXXXXXDGVKGSRGESGPNGAPGDPGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVGPNGPDGKSGNKGAIGPTGQPGVRGSIGNPGKDGALGPMGTSGMRGPPGNIGVEGSKGNKGPPGS 6291
G GPPG G QGP GP G G G PG GP+G KG+ G +G G G G G GP G G G GN GE+GPVG +G G G G+PG PG+ GE GK G +G G G G RGP G GI G PG G GDIG TGP G G G G+ G G GP+G +GD+G G G GV+GP+G +G RG+ G LG+ G G G G RG+ GP+G PG G G G GP G PG G GP G G KG GP G+ GSIG PG++GA G +G G+ G PG G GS G GPPG
Sbjct: 459 GNVGPPGQSGLQGPIGPPGNSGQRGLPGSNGPSGTKGNKG---SKGPYGKPGIAGDNGASGPQGPRGENGDLGNTGEQGPVG---EVGNAGIRGVNGAPGIPGKDGENGKDAVDGAKGNI------------GPIGSSGRRGPQGMTGIQGPPGSIGLKGDIGSTGPMGRIGVPGIPGKPGIVGPPGPEGFKGDKGLPGNPGTPGVIGPQGLRGKRGKAGGLGKVSFTGRSG-----GQSGPRGKPGPSGKPGTSGPKGVAGPPGPMGEPGPTGP---------------------------TGPIGSIGLKGERGPN---GIDGSIGPPGRNGAPGAVGPQGLIGLPGTPGTTGSVGEIGPPGQ 770 HSP 6 Score: 68.5514 bits (166), Expect = 6.148e-11 Identity = 150/365 (41.10%), Postives = 174/365 (47.67%), Query Frame = -1
Query: 2902 GVTGPPGARGEQGPAGPVGKEGLSGAPGFVGPTGEKGDTGPPGEQGDLGDIXXXXXXXXXXXXXXXXXXXXXGNVGERGPVGPDGMIGPPGPEGKIGSPGSPXXXXXXXXXXXXXXXXXXXXXXXXXXXGLDGKSGKPGTRGPIGPVGINGRPGKKGELGDIGLTGPQGISGPRGKRGRVGNPGEGGPKGSQGDQGPIGLEGRAGVLGPKGQKGDXXXXXXXXXXXXXXXXXXXXPDGVKGSRGESGPNGAPGDPGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEVGPNGPDGKSGNKGAIGPTGQPGVRGSIGNPGKDGALGPMGTSGMRGPPGNIGVEGSKGNKGPPGS 3996
G GPPG G QGP GP G G G PG GP+G KG+ G +G G G G G GP G G G GN GE+GPVG +G G G G+PG PG+ GE GK G +G G G G RGP G GI G PG G GDIG TGP G G G G+ G G GP+G +GD+G G G GV+GP+G +G RG+ G LG+ G G G G RG+ GP+G PG G G G GP G PG G GP G G KG GP G+ GSIG PG++GA G +G G+ G PG G GS G GPPG
Sbjct: 459 GNVGPPGQSGLQGPIGPPGNSGQRGLPGSNGPSGTKGNKG---SKGPYGKPGIAGDNGASGPQGPRGENGDLGNTGEQGPVG---EVGNAGIRGVNGAPGIPGKDGENGKDAVDGAKGNI------------GPIGSSGRRGPQGMTGIQGPPGSIGLKGDIGSTGPMGRIGVPGIPGKPGIVGPPGPEGFKGDKGLPGNPGTPGVIGPQGLRGKRGKAGGLGKVSFTGRSG-----GQSGPRGKPGPSGKPGTSGPKGVAGPPGPMGEPGPTGP---------------------------TGPIGSIGLKGERGPN---GIDGSIGPPGRNGAPGAVGPQGLIGLPGTPGTTGSVGEIGPPGQ 770 HSP 7 Score: 63.929 bits (154), Expect = 1.614e-9 Identity = 149/396 (37.63%), Postives = 178/396 (44.95%), Query Frame = 1
Query: 5197 GVTGPPGARGEQGPAGPVGKEGLSG---APGFVGPTGEKGDTGPPGEQGDLGDIXXX---------------XXXXXXXXXXXXXXXXXXXNVGERGPVGPDGMIGPP------------GPEGKIGSPGSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDGKSGKPGTRGPIGPVGINGRPGKKGELGDIGLTGPQGISGPRGKRGRVGNPGEGGPKGSQGDQGPIGLEGRAGVLGPKGQKGDXXXXXXXXXXXXXXXXXXXXXDGVKGSRGESGPNGAPGDPGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVGPNGPDGKSGNKGAIGPTGQPGVRGSIGNPGKDGALGPMGTSGMRGPPGNIGVEGSKGNKGPPGSR 6294
G GP G +G +G GP GK G++G A G GP GE GD G GEQG +G++G G G G G GP G+ G RGP G G+ GPP GP G+IG PG P GKPG GP GP G G G G G G+ GPQG+ G RGK G +G G G Q GP G G +G G G KG G PG +GE GP GP GPIG G+KG RG +G +G+ G PG NG PGA+GP G+ +G G G +G+ G IGP GQ G G+ G PG DG +GP+G G G PG GV G +G +G G R
Sbjct: 486 GSNGPSGTKGNKGSKGPYGKPGIAGDNGASGPQGPRGENGDLGNTGEQGPVGEVGNAGIRGVNGAPGIPGKDGENGKDAVDGAKGNIGPIGSSGRRGPQGMTGIQGPPGSIGLKGDIGSTGPMGRIGVPGIP---------------------------------GKPGIVGPPGPEGFKGDKGLPGNPGTPGVIGPQGLRGKRGKAGGLGKVSFTGRSGGQ--SGPRGKPGPSGKPGTSGPKGVAGPPGPMGEPGPTGPTGPIGSIGLKGERGPNGIDGSIGPPGRNGAPGAVGPQGL------------------------------IGLPGTPGTTGSVGEIGPPGQIGPNGNSGKPGDDGKVGPIGPRGSIGLPGPSGVPGIRGQQGRDGPR 816 HSP 8 Score: 63.929 bits (154), Expect = 1.614e-9 Identity = 149/396 (37.63%), Postives = 178/396 (44.95%), Query Frame = -1
Query: 2899 GVTGPPGARGEQGPAGPVGKEGLSG---APGFVGPTGEKGDTGPPGEQGDLGDIXXX---------------XXXXXXXXXXXXXXXXXXGNVGERGPVGPDGMIGPP------------GPEGKIGSPGSPXXXXXXXXXXXXXXXXXXXXXXXXXXXGLDGKSGKPGTRGPIGPVGINGRPGKKGELGDIGLTGPQGISGPRGKRGRVGNPGEGGPKGSQGDQGPIGLEGRAGVLGPKGQKGDXXXXXXXXXXXXXXXXXXXXPDGVKGSRGESGPNGAPGDPGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEVGPNGPDGKSGNKGAIGPTGQPGVRGSIGNPGKDGALGPMGTSGMRGPPGNIGVEGSKGNKGPPGSR 3996
G GP G +G +G GP GK G++G A G GP GE GD G GEQG +G++G G G G G GP G+ G RGP G G+ GPP GP G+IG PG P GKPG GP GP G G G G G G+ GPQG+ G RGK G +G G G Q GP G G +G G G KG G PG +GE GP GP GPIG G+KG RG +G +G+ G PG NG PGA+GP G+ +G G G +G+ G IGP GQ G G+ G PG DG +GP+G G G PG GV G +G +G G R
Sbjct: 486 GSNGPSGTKGNKGSKGPYGKPGIAGDNGASGPQGPRGENGDLGNTGEQGPVGEVGNAGIRGVNGAPGIPGKDGENGKDAVDGAKGNIGPIGSSGRRGPQGMTGIQGPPGSIGLKGDIGSTGPMGRIGVPGIP---------------------------------GKPGIVGPPGPEGFKGDKGLPGNPGTPGVIGPQGLRGKRGKAGGLGKVSFTGRSGGQ--SGPRGKPGPSGKPGTSGPKGVAGPPGPMGEPGPTGPTGPIGSIGLKGERGPNGIDGSIGPPGRNGAPGAVGPQGL------------------------------IGLPGTPGTTGSVGEIGPPGQIGPNGNSGKPGDDGKVGPIGPRGSIGLPGPSGVPGIRGQQGRDGPR 816 HSP 9 Score: 58.151 bits (139), Expect = 1.096e-7 Identity = 79/233 (33.91%), Postives = 100/233 (42.92%), Query Frame = 1
Query: 5590 DGKSGKPGTRGPIGPVGINGRPGKKGELGDIGLTGPQGISGPRGKRGRVGNPGEGGPKGSQGDQGPIGLEGRAGVLGPKGQKGDXXXXXXXXXXXXXXXXXXXXXDGVKGSRGESGPNGAPGDPGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVGPNGPDGKSGNKGAIGPTGQPGVRGSIGNPGKDGALGPMGTSGMRGPPGNIGVEGSKGNKGPPG 6288
DGK GK G GP GP G G G G G G+ GP G+ G +G+RGR+G G GP+G+ G QGP G GR G +G G G+ G G G G G++GE G G PG PGL GP+G+ G++G + G++GSIG G G+ G G G G PG G++G G KG PG
Sbjct: 119 DGKPGKNGDPGPQGPTGEPGINGPTGPTGVPGMKGPLGVKGDKGQRGRMGKDGILGPRGNLGPQGPTGAPGRRGTVGSPGPVGN------------AGHPGVQGISGRPGNQGEPGMQGPPGLPGL---------------------------------------------RGPEGEKGSQGGL------GIKGSIGQDGYPGSDGKRGAPGEHGDPGKAGIDGPSGVKGDPG 288 HSP 10 Score: 58.151 bits (139), Expect = 1.096e-7 Identity = 79/233 (33.91%), Postives = 100/233 (42.92%), Query Frame = -1
Query: 2905 DGKSGKPGTRGPIGPVGINGRPGKKGELGDIGLTGPQGISGPRGKRGRVGNPGEGGPKGSQGDQGPIGLEGRAGVLGPKGQKGDXXXXXXXXXXXXXXXXXXXXPDGVKGSRGESGPNGAPGDPGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEVGPNGPDGKSGNKGAIGPTGQPGVRGSIGNPGKDGALGPMGTSGMRGPPGNIGVEGSKGNKGPPG 3603
DGK GK G GP GP G G G G G G+ GP G+ G +G+RGR+G G GP+G+ G QGP G GR G +G G G+ G G G G G++GE G G PG PGL GP+G+ G++G + G++GSIG G G+ G G G G PG G++G G KG PG
Sbjct: 119 DGKPGKNGDPGPQGPTGEPGINGPTGPTGVPGMKGPLGVKGDKGQRGRMGKDGILGPRGNLGPQGPTGAPGRRGTVGSPGPVGN------------AGHPGVQGISGRPGNQGEPGMQGPPGLPGL---------------------------------------------RGPEGEKGSQGGL------GIKGSIGQDGYPGSDGKRGAPGEHGDPGKAGIDGPSGVKGDPG 288 HSP 11 Score: 52.373 bits (124), Expect = 5.493e-6 Identity = 134/379 (35.36%), Postives = 166/379 (43.80%), Query Frame = 1
Query: 5200 VTGPPGARGEQGPAGPVGKEGLSGAPGFVGPTGEKGDTGPPGEQGDLGDIXXXXXXXXXXXXXXXXXXXXXXNVGERGPVGPDGMIGPPGPEGKIGSPGSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDGKSGKPGTR---GPIGPVGINGRPGKKGELGDIGLTGP------QGISGPRGKRGRVGNPGEGGP---KGSQGDQGPIGLEGRA------GVLGPKGQKGDXXXXXXXXXXXXXXXXXXXXXDGVKGSRGESGPNGAPGDPGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVGPNGPDGKSGNKGAIGPTGQPGVRGSIGNPGKDGALGPMGTSGMRGPPGNIGVEGSKGNKGP 6282
+ G G++G+ GP GP G GL G PG +G G +G G G QG LG GP G G+ G +G +G G+ G PG +GK G G PG+ G G+ G G G+ G G+ GK G G G PG GP GP+G G PGK G+ G G GP QG GP G G+ G PG GP KG++G +GP G G A G GP+G+ GD G GE G G G+ G G NGAPG PG + G NG D G KG IGP G G R GP G +G++GPPG+IG++G G+ GP
Sbjct: 310 IIGELGSKGDIGPMGPSGSPGLRGNPGVIGSLGSQGFPGARGPQGILGS---------------PGPRGRTGSKGSQGTIGIAGVPGTPGKDGKAGQVGIPGKNGPPGRPGPVGPIGLPGHPGKDGKPGPAGFPGTPGKNMQPGPQGPLGERGPPGKSGDDGVPGNVGPPGQSGLQGPIGPPGNSGQRGLPGSNGPSGTKGNKGSKGPYGKPGIAGDNGASGPQGPRGENGDLGNTGEQGPV------------GEVGNAGIRGVNGAPGIPGKD------------------------------------------GENGKDAVDGAKGNIGPIGSSGRR------------GPQGMTGIQGPPGSIGLKGDIGSTGP 607 HSP 12 Score: 52.373 bits (124), Expect = 5.493e-6 Identity = 134/379 (35.36%), Postives = 166/379 (43.80%), Query Frame = -1
Query: 2911 VTGPPGARGEQGPAGPVGKEGLSGAPGFVGPTGEKGDTGPPGEQGDLGDIXXXXXXXXXXXXXXXXXXXXXGNVGERGPVGPDGMIGPPGPEGKIGSPGSPXXXXXXXXXXXXXXXXXXXXXXXXXXXGLDGKSGKPGTR---GPIGPVGINGRPGKKGELGDIGLTGP------QGISGPRGKRGRVGNPGEGGP---KGSQGDQGPIGLEGRA------GVLGPKGQKGDXXXXXXXXXXXXXXXXXXXXPDGVKGSRGESGPNGAPGDPGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEVGPNGPDGKSGNKGAIGPTGQPGVRGSIGNPGKDGALGPMGTSGMRGPPGNIGVEGSKGNKGP 3993
+ G G++G+ GP GP G GL G PG +G G +G G G QG LG GP G G+ G +G +G G+ G PG +GK G G PG+ G G+ G G G+ G G+ GK G G G PG GP GP+G G PGK G+ G G GP QG GP G G+ G PG GP KG++G +GP G G A G GP+G+ GD G GE G G G+ G G NGAPG PG + G NG D G KG IGP G G R GP G +G++GPPG+IG++G G+ GP
Sbjct: 310 IIGELGSKGDIGPMGPSGSPGLRGNPGVIGSLGSQGFPGARGPQGILGS---------------PGPRGRTGSKGSQGTIGIAGVPGTPGKDGKAGQVGIPGKNGPPGRPGPVGPIGLPGHPGKDGKPGPAGFPGTPGKNMQPGPQGPLGERGPPGKSGDDGVPGNVGPPGQSGLQGPIGPPGNSGQRGLPGSNGPSGTKGNKGSKGPYGKPGIAGDNGASGPQGPRGENGDLGNTGEQGPV------------GEVGNAGIRGVNGAPGIPGKD------------------------------------------GENGKDAVDGAKGNIGPIGSSGRR------------GPQGMTGIQGPPGSIGLKGDIGSTGP 607
BLAST of collagen vs. Smed Unigenes AA
Match: SMU15040144 (dd_smedV4_740_0_1|m.36260|m.3408) HSP 1 Score: 176.792 bits (447), Expect = 6.701e-44 Identity = 85/226 (37.61%), Postives = 125/226 (55.31%), Query Frame = 1
Query: 8116 VYGDDPKAAELLGNNAIKNPQGTKEVPARTCKHLSSVNPQAPDGEYWIDPNGGRIEDAVKVYCKISEQKTCIKSIDNNLSIRSWNSPILNGPTWLQKLINKNEIQYSVPNNQLAFLKVYSDNAVQRVTFNCENHPIIGNEKIFNKVTAPRLLADDDS--IIKMTHPKLKYSVIKDECQYSKSSEAESVIEVKDVANLLPIRDVGIHIINNRKSKFGLTIEDVCFS* 8787
+Y DD AA +LG++ I P GTK++PAR+C HL S + DG Y+IDPNGG++ DA +V+CK+ +TCI ++ S S++ +N +L Y + N QL FLK+ S A Q + C N ++ K P ++ D++ + K H L Y VIKDECQ S EAE+V+ V + LPIRD+ + ++ S+F L + VCFS*
Sbjct: 1101 MYSDDANAANILGSDTISVPLGTKDLPARSCNHLKSTSSHLKDGTYFIDPNGGKMNDAFEVFCKMETGETCISPKQSSFSKISYSENPINKYISYGELSGIQRFDYVIDNTQLMFLKMVSTRANQEIKIACNNMAVV------EKTEYPAIIFTDNNRELTKDDH-HLSYKVIKDECQNMSSEEAETVLLVSGDSKRLPIRDLTLG-SDSDISEFRLKLSKVCFS* 1318 HSP 2 Score: 176.792 bits (447), Expect = 6.701e-44 Identity = 85/226 (37.61%), Postives = 125/226 (55.31%), Query Frame = -1
Query: 406 VYGDDPKAAELLGNNAIKNPQGTKEVPARTCKHLSSVNPQAPDGEYWIDPNGGRIEDAVKVYCKISEQKTCIKSIDNNLSIRSWNSPILNGPTWLQKLINKNEIQYSVPNNQLAFLKVYSDNAVQRVTFNCENHPIIGNEKIFNKVTAPRLLADDDS--IIKMTHPKLKYSVIKDECQYSKSSEAESVIEVKDVANLLPIRDVGIHIINNRKSKFGLTIEDVCFS* 1077
+Y DD AA +LG++ I P GTK++PAR+C HL S + DG Y+IDPNGG++ DA +V+CK+ +TCI ++ S S++ +N +L Y + N QL FLK+ S A Q + C N ++ K P ++ D++ + K H L Y VIKDECQ S EAE+V+ V + LPIRD+ + ++ S+F L + VCFS*
Sbjct: 1101 MYSDDANAANILGSDTISVPLGTKDLPARSCNHLKSTSSHLKDGTYFIDPNGGKMNDAFEVFCKMETGETCISPKQSSFSKISYSENPINKYISYGELSGIQRFDYVIDNTQLMFLKMVSTRANQEIKIACNNMAVV------EKTEYPAIIFTDNNRELTKDDH-HLSYKVIKDECQNMSSEEAETVLLVSGDSKRLPIRDLTLG-SDSDISEFRLKLSKVCFS* 1318 HSP 3 Score: 63.1586 bits (152), Expect = 3.138e-9 Identity = 146/375 (38.93%), Postives = 174/375 (46.40%), Query Frame = 1
Query: 5191 STGVTGPPGARGEQGPAGPVGKEGLSGAPGFVGPTGEKGDTGPPGEQGDLGDIXXXXXXXXXXXXXXXXXXXXXXNVGERGPVGPDGMIGPPGPEGKIGSPGSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDGKSGKPGTRGPIGPVGINGRPGKKGELGDIGLTGPQGISGPRGKRGRVGNPGEGGPKGSQGDQGPIGLEGRAGVLGPKGQKGDXXXXXXXXXXXXXXXXXXXXXDGVKGSRGESGPNGAPGDPGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVGPNGPDGKSGNKGAIGPTGQPGVRGSIGNPGKDGALGP---------MGTSGMRGPPGNIGVEGSKGNKGPPG 6288
S G GPPG G G +G +GK G G GF G G G G G QG G G G G G G GP G G+ G GP G DG+ G GPEGK G+PG G G G+ G SG+ G RG G +G+ G PG+ G G G G G++G RG G PG GP G +G G GL G G G KG+ G+ G G+ G++G +GP G G PG GK G G PG G G G G++G G+ G G+ G +G GP GP GK G G +GP G+PG G G PGKDG GP MG G+ GPPG G G G+ G PG
Sbjct: 696 SPGEIGPPGDIGPTGQSGALGKPGPKGPVGFPGKDGRDGRLGLDGSQGPAGSPGKVGPQGAKGKVGPQGPPGGPGSTGMSGPQGDDGLDGNVGPEGKPGNPG---------------------LDGFPGNQGVPGVSGRDGERGDQGKLGVPGIPGETGMNGTPGRDGRPGVAG---MRGDTGQPGPRGPAGPEGSTGAPGLMGDIGKPGQKGKPGNTGP------------------KGLTGNQGITGPMGNTGKPGAAGKTGGKGLPGPDGPSGSVGRRGESGVPGKSGGFGSKGKKGAEGPVGPAGKEGLPGKVGPLGKPGKPGKEGKPGKDGKTGPVGEPGHPGWMGPQGLLGPPGPQGDRGKPGDPGSPG 1028 HSP 4 Score: 63.1586 bits (152), Expect = 3.138e-9 Identity = 146/375 (38.93%), Postives = 174/375 (46.40%), Query Frame = -1
Query: 2905 STGVTGPPGARGEQGPAGPVGKEGLSGAPGFVGPTGEKGDTGPPGEQGDLGDIXXXXXXXXXXXXXXXXXXXXXGNVGERGPVGPDGMIGPPGPEGKIGSPGSPXXXXXXXXXXXXXXXXXXXXXXXXXXXGLDGKSGKPGTRGPIGPVGINGRPGKKGELGDIGLTGPQGISGPRGKRGRVGNPGEGGPKGSQGDQGPIGLEGRAGVLGPKGQKGDXXXXXXXXXXXXXXXXXXXXPDGVKGSRGESGPNGAPGDPGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEVGPNGPDGKSGNKGAIGPTGQPGVRGSIGNPGKDGALGP---------MGTSGMRGPPGNIGVEGSKGNKGPPG 4002
S G GPPG G G +G +GK G G GF G G G G G QG G G G G G G GP G G+ G GP G DG+ G GPEGK G+PG G G G+ G SG+ G RG G +G+ G PG+ G G G G G++G RG G PG GP G +G G GL G G G KG+ G+ G G+ G++G +GP G G PG GK G G PG G G G G++G G+ G G+ G +G GP GP GK G G +GP G+PG G G PGKDG GP MG G+ GPPG G G G+ G PG
Sbjct: 696 SPGEIGPPGDIGPTGQSGALGKPGPKGPVGFPGKDGRDGRLGLDGSQGPAGSPGKVGPQGAKGKVGPQGPPGGPGSTGMSGPQGDDGLDGNVGPEGKPGNPG---------------------LDGFPGNQGVPGVSGRDGERGDQGKLGVPGIPGETGMNGTPGRDGRPGVAG---MRGDTGQPGPRGPAGPEGSTGAPGLMGDIGKPGQKGKPGNTGP------------------KGLTGNQGITGPMGNTGKPGAAGKTGGKGLPGPDGPSGSVGRRGESGVPGKSGGFGSKGKKGAEGPVGPAGKEGLPGKVGPLGKPGKPGKEGKPGKDGKTGPVGEPGHPGWMGPQGLLGPPGPQGDRGKPGDPGSPG 1028 HSP 5 Score: 60.4622 bits (145), Expect = 2.213e-8 Identity = 155/383 (40.47%), Postives = 182/383 (47.52%), Query Frame = 1
Query: 5215 GARGEQGPAGPVGKEGLSGAPGFVGPTGEKGDTGPPGEQGDLGDIXXXXXXXXXXXXXXXXXXXX------XXNVGERGPVGPDG---------MIGPPGPEGKIGSPGSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDGKSGKPGTRGPIGPVGINGRPGKKGELGDIGLTGPQGISGPRGKRGRVGNPGEGGPKGSQGDQGPIGLEGRAGVLGPKGQKGDXXXXXXXXXXXXXXXXXXXXXDGVKGSRGESGPNGAPGDPGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVGPNGPDGKSGNKGAIGPTGQPGVRGSIGN------PGKDGALGPMGTSGMRG---PPGNIGVEGSKGNKGPPGS 6291
G G GP GP GK GL G+ GP G G GP GEQG GD GPPG GP GP G+ G GP +G++G +GP+G G IG PG +G G G PG G G KG+ G +G KGG+G G G+DGK G G G G G NG PG KG G TGPQGI G G GR G G G +G +GD GP GL GR+G++G G G G G G G G IG G G+ G++G GPNG PG+N G G DG+ G G G G+PG RG G+ PGKDG +GP+G SG G PPG G G +G G PGS
Sbjct: 124 GRNGAGGPQGPTGKPGLMGS---QGPQGMNGPKGPNGEQGPKGDAGPPGGKGPKGPIGELGAAGPIGLPGIRGDLGSQGPIGSHGPEGEPGVGGRIGFPGADGITGVSGMPGVIGPTGTKGDRGIQGKKGGEGVDGAPGIDGKDGSVGDPGAPGEHGSNGIPGSKGSQGG---TGPQGIIGNAGATGRPGLDGMIGIQGVKGDSGPQGLNGRSGIIGSVGPPGSLGPIGNPGNRGDPGRIGTPGTRGIPGTKGSQGPNGP---PGIN------------------------------------------GSPGADGRDGLPGIDGANGKPGSRGPRGSQGLAGLPGKDGVVGPVGLSGQPGANKPPGPQGKMGPRGLTGKPGS 455 HSP 6 Score: 60.4622 bits (145), Expect = 2.213e-8 Identity = 155/383 (40.47%), Postives = 182/383 (47.52%), Query Frame = -1
Query: 2902 GARGEQGPAGPVGKEGLSGAPGFVGPTGEKGDTGPPGEQGDLGDIXXXXXXXXXXXXXXXXXXXX------XGNVGERGPVGPDG---------MIGPPGPEGKIGSPGSPXXXXXXXXXXXXXXXXXXXXXXXXXXXGLDGKSGKPGTRGPIGPVGINGRPGKKGELGDIGLTGPQGISGPRGKRGRVGNPGEGGPKGSQGDQGPIGLEGRAGVLGPKGQKGDXXXXXXXXXXXXXXXXXXXXPDGVKGSRGESGPNGAPGDPGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEVGPNGPDGKSGNKGAIGPTGQPGVRGSIGN------PGKDGALGPMGTSGMRG---PPGNIGVEGSKGNKGPPGS 3978
G G GP GP GK GL G+ GP G G GP GEQG GD GPPG GP GP G+ G GP +G++G +GP+G G IG PG +G G G PG G G KG+ G +G KGG+G G G+DGK G G G G G NG PG KG G TGPQGI G G GR G G G +G +GD GP GL GR+G++G G G G G G G G IG G G+ G++G GPNG PG+N G G DG+ G G G G+PG RG G+ PGKDG +GP+G SG G PPG G G +G G PGS
Sbjct: 124 GRNGAGGPQGPTGKPGLMGS---QGPQGMNGPKGPNGEQGPKGDAGPPGGKGPKGPIGELGAAGPIGLPGIRGDLGSQGPIGSHGPEGEPGVGGRIGFPGADGITGVSGMPGVIGPTGTKGDRGIQGKKGGEGVDGAPGIDGKDGSVGDPGAPGEHGSNGIPGSKGSQGG---TGPQGIIGNAGATGRPGLDGMIGIQGVKGDSGPQGLNGRSGIIGSVGPPGSLGPIGNPGNRGDPGRIGTPGTRGIPGTKGSQGPNGP---PGIN------------------------------------------GSPGADGRDGLPGIDGANGKPGSRGPRGSQGLAGLPGKDGVVGPVGLSGQPGANKPPGPQGKMGPRGLTGKPGS 455 HSP 7 Score: 58.151 bits (139), Expect = 1.105e-7 Identity = 135/352 (38.35%), Postives = 158/352 (44.89%), Query Frame = 1
Query: 5197 GVTGPPGARGEQGPAGPVGKEGLSGAPGFVGPTGEKGDTGPPGEQGDLGDIXXXXXXXXXXXXXXXXXXXXXXNVGERGPVGPDGMIGPPGPEGKIGSPGSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDGKSGKPGTRGPIGPVGINGRPGKKGELGDIGLTGPQGISGPRGKRGRVGNPGEGGPKGSQGDQGPIGLEGRAGVLGPKGQKGDXXXXXXXXXXXXXXXXXXXXXDGVKGSRGESGPNGAPGDPGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVGPNGPDGKSGNKGAIGPTGQPGVRGSIGNPGKDGALGPMGTSGMRGPPGNIG 6252
GV GP G +G++G G G EG+ GAPG G G GD G PGE G G G+ G +G GP G+IG G G+ G LDG G G +G GP G+NGR G G +G G GP G G RG GR+G PG G G++G QGP G G G G G+ G G G G+ G GP G G G+ G G GP G G PG N PG G G G G G G GP+G+PGP G+ G G G G +G GN G G G PG GS G PG G GP G +G+RGP G G
Sbjct: 232 GVIGPTGTKGDRGIQGKKGGEGVDGAPGIDGKDGSVGDPGAPGEHGSNG---------------------IPGSKGSQGGTGPQGIIGNAGATGRPG---------------------------------LDGMIGIQGVKGDSGPQGLNGRSGIIGSVGPPGSLGPIGNPGNRGDPGRIGTPGTRGIPGTKGSQGPNGPPGINGSPGADGRDGLPGIDGANGKPGSRGPRGSQGLAGLPGKDGVVGPVGLSGQPGANKPPGPQGKMGPRGLTGKPGSNGVPGPVGQPGPPGSQGSSGSPGLIGENGLLGNIGKPGSNGAPGAIGSAGAPGVPGDDGPPGPAGLRGPIGKKG 529 HSP 8 Score: 58.151 bits (139), Expect = 1.105e-7 Identity = 135/352 (38.35%), Postives = 158/352 (44.89%), Query Frame = -1
Query: 2941 GVTGPPGARGEQGPAGPVGKEGLSGAPGFVGPTGEKGDTGPPGEQGDLGDIXXXXXXXXXXXXXXXXXXXXXGNVGERGPVGPDGMIGPPGPEGKIGSPGSPXXXXXXXXXXXXXXXXXXXXXXXXXXXGLDGKSGKPGTRGPIGPVGINGRPGKKGELGDIGLTGPQGISGPRGKRGRVGNPGEGGPKGSQGDQGPIGLEGRAGVLGPKGQKGDXXXXXXXXXXXXXXXXXXXXPDGVKGSRGESGPNGAPGDPGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEVGPNGPDGKSGNKGAIGPTGQPGVRGSIGNPGKDGALGPMGTSGMRGPPGNIG 3996
GV GP G +G++G G G EG+ GAPG G G GD G PGE G G G+ G +G GP G+IG G G+ G LDG G G +G GP G+NGR G G +G G GP G G RG GR+G PG G G++G QGP G G G G G+ G G G G+ G GP G G G+ G G GP G G PG N PG G G G G G G GP+G+PGP G+ G G G G +G GN G G G PG GS G PG G GP G +G+RGP G G
Sbjct: 232 GVIGPTGTKGDRGIQGKKGGEGVDGAPGIDGKDGSVGDPGAPGEHGSNG---------------------IPGSKGSQGGTGPQGIIGNAGATGRPG---------------------------------LDGMIGIQGVKGDSGPQGLNGRSGIIGSVGPPGSLGPIGNPGNRGDPGRIGTPGTRGIPGTKGSQGPNGPPGINGSPGADGRDGLPGIDGANGKPGSRGPRGSQGLAGLPGKDGVVGPVGLSGQPGANKPPGPQGKMGPRGLTGKPGSNGVPGPVGQPGPPGSQGSSGSPGLIGENGLLGNIGKPGSNGAPGAIGSAGAPGVPGDDGPPGPAGLRGPIGKKG 529 HSP 9 Score: 57.7658 bits (138), Expect = 1.459e-7 Identity = 156/381 (40.94%), Postives = 189/381 (49.61%), Query Frame = 1
Query: 5218 ARGEQGPAGPVGKEGLSGAPGFVGPTGEKGDTGPPGEQGDLGDIXXXXXXXXXXXXXXXXXXXXXXNVGERGPVGP---------DGMIGPPGPEG------------KIGSPGSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDGKSGKPGTRGPIGPVGINGRPGKKGELGDIGLTGPQGISGPRGKRGRVGNPGEGGPKGSQGDQGPIGLEGRAGVLGPKGQKGDXXXXXXXXXXXXXXXXXXXXXDGVKGSRGESGPNGAPGDPGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVGPNGP---DGKSGNKGAIGPTGQPGVRGSIGNPGKDGA---LGPMGTSGMRGPPGNIGVEGSKGNKG 6279
ARG +G GP GK+G++G PG G PG+ G +G G G GP G PG +G G +G++G GP+GP GM GPPGP+G K+GSPG PG G+ G G G+ I G G GKPG G G G G PG+ G GDIG TG G G G +G VG PG+ G G G G G G G +GP+G KG G G G G G GP G DG+ G+ GP G PG+PGL+G PG G PG+ G G+ G G+ G G PG E G NG DG+ G G G TGQPG RG G G GA +G +G G +G PGN G +G GN+G
Sbjct: 545 ARGVRGKPGPPGKDGVNGKPG---------KDGKPGDLGVIGITGKSGPPGPSGKPGPAGLMGLKGDIGPTGPLGPLGVTGISGLPGMNGPPGPQGYKGTMGLSGKTGKVGSPGPPGNRGKPGSSGSTGNVQIAGRSSGG-----SGTKGKPGEDGDAGKPGSPGSPGEIGPPGDIGPTGQSGALGKPGPKGPVGFPGKDGRDGRLGLDGSQGPAGSPGKVGPQGAKGKVGPQGPPGGPGSTGMSGPQGDDGLDGN---VGPEGKPGNPGLDGFPGNQGVPGVSGRDGERGDQGKLGVPGIPG---------ETGMNGTPGRDGRPGVAGMRGDTGQPGPRGPAGPEGSTGAPGLMGDIGKPGQKGKPGNTGPKGLTGNQG 899 HSP 10 Score: 57.7658 bits (138), Expect = 1.459e-7 Identity = 156/381 (40.94%), Postives = 189/381 (49.61%), Query Frame = -1
Query: 2914 ARGEQGPAGPVGKEGLSGAPGFVGPTGEKGDTGPPGEQGDLGDIXXXXXXXXXXXXXXXXXXXXXGNVGERGPVGP---------DGMIGPPGPEG------------KIGSPGSPXXXXXXXXXXXXXXXXXXXXXXXXXXXGLDGKSGKPGTRGPIGPVGINGRPGKKGELGDIGLTGPQGISGPRGKRGRVGNPGEGGPKGSQGDQGPIGLEGRAGVLGPKGQKGDXXXXXXXXXXXXXXXXXXXXPDGVKGSRGESGPNGAPGDPGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEVGPNGP---DGKSGNKGAIGPTGQPGVRGSIGNPGKDGA---LGPMGTSGMRGPPGNIGVEGSKGNKG 3975
ARG +G GP GK+G++G PG G PG+ G +G G G GP G PG +G G +G++G GP+GP GM GPPGP+G K+GSPG PG G+ G G G+ I G G GKPG G G G G PG+ G GDIG TG G G G +G VG PG+ G G G G G G G +GP+G KG G G G G G GP G DG+ G+ GP G PG+PGL+G PG G PG+ G G+ G G+ G G PG E G NG DG+ G G G TGQPG RG G G GA +G +G G +G PGN G +G GN+G
Sbjct: 545 ARGVRGKPGPPGKDGVNGKPG---------KDGKPGDLGVIGITGKSGPPGPSGKPGPAGLMGLKGDIGPTGPLGPLGVTGISGLPGMNGPPGPQGYKGTMGLSGKTGKVGSPGPPGNRGKPGSSGSTGNVQIAGRSSGG-----SGTKGKPGEDGDAGKPGSPGSPGEIGPPGDIGPTGQSGALGKPGPKGPVGFPGKDGRDGRLGLDGSQGPAGSPGKVGPQGAKGKVGPQGPPGGPGSTGMSGPQGDDGLDGN---VGPEGKPGNPGLDGFPGNQGVPGVSGRDGERGDQGKLGVPGIPG---------ETGMNGTPGRDGRPGVAGMRGDTGQPGPRGPAGPEGSTGAPGLMGDIGKPGQKGKPGNTGPKGLTGNQG 899 HSP 11 Score: 54.6842 bits (130), Expect = 1.029e-6 Identity = 128/355 (36.06%), Postives = 155/355 (43.66%), Query Frame = 1
Query: 5224 GEQGPAGPVGKEGLSGAPGFVGPTGEKG---DTGPPGEQGDLGDIXXXXXXXXXXXXXXXXXXXXXXNVGERGPVGPDGMIGPPGPEGKIGSPGSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDGKSGKPGTRGPIGPVGINGRPGKKGELGDIGLTGPQGISGPRGKRGRVGNPGEGGPKGSQGDQGPIGLEGRAGVLGPKGQKGDXXXXXXXXXXXXXXXXXXXXXDGVKGSRGESGPNGAPGDPGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVGPNGPDGKSGNKGAIGPTGQPGVRGSIGNPGKDGALGPMGTSGMRGP---PGNIGVEGSKG 6270
GE G G +GK G +GAPG +G G G D GPPG G G IG G+ G G PG G G +G G+ GP G DG+ G PG +GK PG G +G G+ G G G G AG GL G G G GP+G GI+G PG G G G G G+SG GK G G PG G GS G G + + GR+ G G KG GE G G PG PG GE+GP G G +G GA+G +PG +G +G PGKDG G +G G +GP PG +G +G+KG
Sbjct: 481 GENGLLGNIGKPGSNGAPGAIGSAGAPGVPGDDGPPGPAGLRGPIGKKGKVGERGGPGGQGNQGARGVRGKPGPPGKDGVNGKPGKDGK------PGDLGVIGITGKSGPPGPSGKPGPAGLMGLKGDIGPTGPLGPLGVTGISGLPGMNGPPGPQGYKGTMGLSGKTGKVGSPGPPGNRGKPGSSGSTGNVQIAGRS-----------------------------SGGSGTKGKPGEDGDAGKPGSPG---------------------------------------SPGEIGPPGDIGPTGQSGALG---KPGPKGPVGFPGKDGRDGRLGLDGSQGPAGSPGKVGPQGAKG 758 HSP 12 Score: 54.6842 bits (130), Expect = 1.029e-6 Identity = 128/355 (36.06%), Postives = 155/355 (43.66%), Query Frame = -1
Query: 2923 GEQGPAGPVGKEGLSGAPGFVGPTGEKG---DTGPPGEQGDLGDIXXXXXXXXXXXXXXXXXXXXXGNVGERGPVGPDGMIGPPGPEGKIGSPGSPXXXXXXXXXXXXXXXXXXXXXXXXXXXGLDGKSGKPGTRGPIGPVGINGRPGKKGELGDIGLTGPQGISGPRGKRGRVGNPGEGGPKGSQGDQGPIGLEGRAGVLGPKGQKGDXXXXXXXXXXXXXXXXXXXXPDGVKGSRGESGPNGAPGDPGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEVGPNGPDGKSGNKGAIGPTGQPGVRGSIGNPGKDGALGPMGTSGMRGP---PGNIGVEGSKG 3969
GE G G +GK G +GAPG +G G G D GPPG G G IG G+ G G PG G G +G G+ GP G DG+ G PG +GK PG G +G G+ G G G G AG GL G G G GP+G GI+G PG G G G G G+SG GK G G PG G GS G G + + GR+ G G KG GE G G PG PG GE+GP G G +G GA+G +PG +G +G PGKDG G +G G +GP PG +G +G+KG
Sbjct: 481 GENGLLGNIGKPGSNGAPGAIGSAGAPGVPGDDGPPGPAGLRGPIGKKGKVGERGGPGGQGNQGARGVRGKPGPPGKDGVNGKPGKDGK------PGDLGVIGITGKSGPPGPSGKPGPAGLMGLKGDIGPTGPLGPLGVTGISGLPGMNGPPGPQGYKGTMGLSGKTGKVGSPGPPGNRGKPGSSGSTGNVQIAGRS-----------------------------SGGSGTKGKPGEDGDAGKPGSPG---------------------------------------SPGEIGPPGDIGPTGQSGALG---KPGPKGPVGFPGKDGRDGRLGLDGSQGPAGSPGKVGPQGAKG 758 HSP 13 Score: 54.299 bits (129), Expect = 1.621e-6 Identity = 41/84 (48.81%), Postives = 51/84 (60.71%), Query Frame = 1
Query: 5590 DGKSGKPGTRGPIGPVGINGRPGKKGELGDIGLTGPQGISGPRGKRGRVGNPGEGGPKGSQGDQGPIGLEGRAGVLGPKGQKGD 5841
DG G+PG +GP G G G+PGK G+ G IG GPQ GP G+ GR G G GGP+G G G +G +G G+ GPKG G+
Sbjct: 78 DGPEGRPGPKGPNGLTGPQGKPGKDGKPGPIGPVGPQ---GPNGRMGRSGRNGAGGPQGPTGKPGLMGSQGPQGMNGPKGPNGE 158 HSP 14 Score: 54.299 bits (129), Expect = 1.621e-6 Identity = 41/84 (48.81%), Postives = 51/84 (60.71%), Query Frame = -1
Query: 3352 DGKSGKPGTRGPIGPVGINGRPGKKGELGDIGLTGPQGISGPRGKRGRVGNPGEGGPKGSQGDQGPIGLEGRAGVLGPKGQKGD 3603
DG G+PG +GP G G G+PGK G+ G IG GPQ GP G+ GR G G GGP+G G G +G +G G+ GPKG G+
Sbjct: 78 DGPEGRPGPKGPNGLTGPQGKPGKDGKPGPIGPVGPQ---GPNGRMGRSGRNGAGGPQGPTGKPGLMGSQGPQGMNGPKGPNGE 158 HSP 15 Score: 51.9878 bits (123), Expect = 6.500e-6 Identity = 124/350 (35.43%), Postives = 146/350 (41.71%), Query Frame = 1
Query: 5419 VGERGPVGPDGMIGPPGPEGKIGSPGSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDGKSGKPGTRGPIGPVGINGRPGKKGELGD------------IGLTGPQGISGPRGKRGR------------------VGNPGEGGP------KGSQGDQGPIG------------------------LEGRAGVLGPKGQKGDXXXXXXXXXXXXXXXXXXXXXDGVKGSRGESGPNGAPGDPGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVGPNGPDGKSGNKGAIGPTGQPGVRGSIGNPGKDGALGPMGTSGMRGPPGNIGVEGSKGNKGPPG 6288
G +GP GP+G GP GP G G G P GK GKPG GP+GP G NGR G+ G G +G GPQG++GP+G G +G G GP +G G QGPIG + G GV+GP G KGDRG G+ G G DG G G+ G G PG PG +G G G G G G G G G GRPG +G G +G G +GP G +G G IG G PG G IGNPG G G +GT G RG P G +GS+G GPPG
Sbjct: 72 AGLQGPDGPEGRPGPKGPNGLTGPQGKP------------------------------GKDGKPGPIGPVGPQGPNGRMGRSGRNGAGGPQGPTGKPGLMGSQGPQGMNGPKGPNGEQGPKGDAGPPGGKGPKGPIGELGAAGPIGLPGIRGDLGSQGPIGSHGPEGEPGVGGRIGFPGADGITGVSGMPGVIGPTGTKGDRGIQGKKGGEGV---------DGAPGIDGKDGSVGDPGAPGEHGSNGIPGSKGSQGGTGPQGIIGNAGATGRPGLDGMIGIQGVKGDSGPQGLNGRSGIIGSVGPPGSLGPIGNPGNRGDPGRIGTPGTRGIP---GTKGSQGPNGPPG 379 HSP 16 Score: 51.9878 bits (123), Expect = 6.500e-6 Identity = 124/350 (35.43%), Postives = 146/350 (41.71%), Query Frame = -1
Query: 2905 VGERGPVGPDGMIGPPGPEGKIGSPGSPXXXXXXXXXXXXXXXXXXXXXXXXXXXGLDGKSGKPGTRGPIGPVGINGRPGKKGELGD------------IGLTGPQGISGPRGKRGR------------------VGNPGEGGP------KGSQGDQGPIG------------------------LEGRAGVLGPKGQKGDXXXXXXXXXXXXXXXXXXXXPDGVKGSRGESGPNGAPGDPGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEVGPNGPDGKSGNKGAIGPTGQPGVRGSIGNPGKDGALGPMGTSGMRGPPGNIGVEGSKGNKGPPG 3774
G +GP GP+G GP GP G G G P GK GKPG GP+GP G NGR G+ G G +G GPQG++GP+G G +G G GP +G G QGPIG + G GV+GP G KGDRG G+ G G DG G G+ G G PG PG +G G G G G G G G G GRPG +G G +G G +GP G +G G IG G PG G IGNPG G G +GT G RG P G +GS+G GPPG
Sbjct: 72 AGLQGPDGPEGRPGPKGPNGLTGPQGKP------------------------------GKDGKPGPIGPVGPQGPNGRMGRSGRNGAGGPQGPTGKPGLMGSQGPQGMNGPKGPNGEQGPKGDAGPPGGKGPKGPIGELGAAGPIGLPGIRGDLGSQGPIGSHGPEGEPGVGGRIGFPGADGITGVSGMPGVIGPTGTKGDRGIQGKKGGEGV---------DGAPGIDGKDGSVGDPGAPGEHGSNGIPGSKGSQGGTGPQGIIGNAGATGRPGLDGMIGIQGVKGDSGPQGLNGRSGIIGSVGPPGSLGPIGNPGNRGDPGRIGTPGTRGIP---GTKGSQGPNGPPG 379
BLAST of collagen vs. RefSeq Human
Match: gi|48762934|ref|NP_000080.2| (collagen alpha-2(I) chain precursor [Homo sapiens]) HSP 1 Score: 142.124 bits (357), Expect = 1.518e-32 Identity = 69/223 (30.94%), Postives = 116/223 (52.02%), Query Frame = 1
Query: 8155 NNAIKN---PQGTKEVPARTCKHLSSVNPQAPDGEYWIDPNGGRIEDAVKVYCKISEQKTCIKSIDNNLSIRSW-NSPILNGPTWLQKLINK-NEIQYSVPN-------NQLAFLKVYSDNAVQRVTFNCENHPIIGNEKIFNKVTAPRLLADDD-SIIKMTHPKLKYSVIKDECQYSKSSEAESVIEVK-DVANLLPIRDVGIHIINNRKSKFGLTIEDVCF 8781
NN I+ P+G+++ PARTC+ L +P+ G YWIDPN G DA+KVYC S +TCI++ N+ ++W S WL + IN ++ +Y+V QLAF+++ ++ A Q +T++C+N +E+ N A L +D ++ + + Y+V+ D C + +++IE K + + LP D+ I +F + I VCF
Sbjct: 1143 NNQIETLLTPEGSRKNPARTCRDLRLSHPEWSSGYYWIDPNQGCTMDAIKVYCDFSTGETCIRAQPENIPAKNWYRSSKDKKHVWLGETINAGSQFEYNVEGVTSKEMATQLAFMRLLANYASQNITYHCKNSIAYMDEETGNLKKAVILQGSNDVELVAEGNSRFTYTVLVDGCSKKTNEWGKTIIEYKTNKPSRLPFLDIAPLDIGGADQEFFVDIGPVCF 1365 HSP 2 Score: 142.124 bits (357), Expect = 1.518e-32 Identity = 69/223 (30.94%), Postives = 116/223 (52.02%), Query Frame = -1
Query: 412 NNAIKN---PQGTKEVPARTCKHLSSVNPQAPDGEYWIDPNGGRIEDAVKVYCKISEQKTCIKSIDNNLSIRSW-NSPILNGPTWLQKLINK-NEIQYSVPN-------NQLAFLKVYSDNAVQRVTFNCENHPIIGNEKIFNKVTAPRLLADDD-SIIKMTHPKLKYSVIKDECQYSKSSEAESVIEVK-DVANLLPIRDVGIHIINNRKSKFGLTIEDVCF 1038
NN I+ P+G+++ PARTC+ L +P+ G YWIDPN G DA+KVYC S +TCI++ N+ ++W S WL + IN ++ +Y+V QLAF+++ ++ A Q +T++C+N +E+ N A L +D ++ + + Y+V+ D C + +++IE K + + LP D+ I +F + I VCF
Sbjct: 1143 NNQIETLLTPEGSRKNPARTCRDLRLSHPEWSSGYYWIDPNQGCTMDAIKVYCDFSTGETCIRAQPENIPAKNWYRSSKDKKHVWLGETINAGSQFEYNVEGVTSKEMATQLAFMRLLANYASQNITYHCKNSIAYMDEETGNLKKAVILQGSNDVELVAEGNSRFTYTVLVDGCSKKTNEWGKTIIEYKTNKPSRLPFLDIAPLDIGGADQEFFVDIGPVCF 1365 HSP 3 Score: 56.225 bits (134), Expect = 1.842e-6 Identity = 92/228 (40.35%), Postives = 114/228 (50.00%), Query Frame = 1
Query: 5191 STGVTGPPGARGEQGPAG---------PVGKEGLSGAPGFVGPTGEKGDTGPPGEQGDLGDIXXXXXXXXXXXXXXXXXXXXXXNVGERGPVGPDGMIGPPGPEGKIGSPGSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDGKSGKPGTRGPIGPVGINGRPGKKGELGDIG---LTGPQGISGPRGKRGRVGNPGEGGPKGSQGDQGPIGLEGRAGVLGPKGQKG 5838
G GPPG GE+GP+G G +GL GAPG +G G +G+ G PG G +G+ GP G AGP G G G G G G G G DG G GP G+ G PG KG +G G G G +G PG GP+GP G +G G+ G G +G GP+G SGP+G RG G PGE GP+G G +G GL+G G+ G G +G
Sbjct: 833 EVGAVGPPGFAGEKGPSGEAGTAGPPGTPGPQGLLGAPGILGLPGSRGERGLPGVAGAVGEPGPLGIAGPPGARGPPGAVGSPGVNGAPGEAGRDGNPGNDGPPGRDGQPGH------------------KGERGYPGNIGPVGAAGAPGPHGPVGPAGKHGNRGETGPSGPVGPAGAVGPRGPSGPQGIRGDKGEPGEKGPRGLPGLKGHNGLQGLPGIAGHHGDQG 1042 HSP 4 Score: 56.225 bits (134), Expect = 1.842e-6 Identity = 92/228 (40.35%), Postives = 114/228 (50.00%), Query Frame = -1
Query: 3355 STGVTGPPGARGEQGPAG---------PVGKEGLSGAPGFVGPTGEKGDTGPPGEQGDLGDIXXXXXXXXXXXXXXXXXXXXXGNVGERGPVGPDGMIGPPGPEGKIGSPGSPXXXXXXXXXXXXXXXXXXXXXXXXXXXGLDGKSGKPGTRGPIGPVGINGRPGKKGELGDIG---LTGPQGISGPRGKRGRVGNPGEGGPKGSQGDQGPIGLEGRAGVLGPKGQKG 4002
G GPPG GE+GP+G G +GL GAPG +G G +G+ G PG G +G+ GP G AGP G G G G G G G G DG G GP G+ G PG KG +G G G G +G PG GP+GP G +G G+ G G +G GP+G SGP+G RG G PGE GP+G G +G GL+G G+ G G +G
Sbjct: 833 EVGAVGPPGFAGEKGPSGEAGTAGPPGTPGPQGLLGAPGILGLPGSRGERGLPGVAGAVGEPGPLGIAGPPGARGPPGAVGSPGVNGAPGEAGRDGNPGNDGPPGRDGQPGH------------------KGERGYPGNIGPVGAAGAPGPHGPVGPAGKHGNRGETGPSGPVGPAGAVGPRGPSGPQGIRGDKGEPGEKGPRGLPGLKGHNGLQGLPGIAGHHGDQG 1042
BLAST of collagen vs. RefSeq Human
Match: gi|767902458|ref|XP_011539022.1| (PREDICTED: collagen alpha-1(XI) chain isoform X2 [Homo sapiens]) HSP 1 Score: 126.716 bits (317), Expect = 7.153e-28 Identity = 68/215 (31.63%), Postives = 105/215 (48.84%), Query Frame = 1
Query: 8164 IKNPQGTKEVPARTCKHLSSVNPQAPDGEYWIDPNGGRIEDAVKVYCKISE-QKTCIKSIDNNLSIRSWNSPILNGPTWLQKLINKNEIQY------SVPNNQLAFLKVYSDNAVQRVTFNCENHPIIGNEKIFNKVTAPRLL-ADDDSIIKMTHPKLKYSVIKDECQYSKSSEAESVIEVKD-VANLLPIRDVGIHIINNRKSKFGLTIEDVCF 8781
+K P GT+ PARTCK L +P PDGEYWIDPN G D+ KVYC + +TCI + +R + P +W + + Y S+ Q+ FLK+ + +A Q T++C + + A R L ++D+ + +P +K + D C K E ++VIE+ + +PI DV I+ ++ KFG + VCF
Sbjct: 1004 MKFPMGTQTNPARTCKDLQLSHPDFPDGEYWIDPNQGCSGDSFKVYCNFTSGGETCIYPDKKSEGVRISSWPKEKPGSWFSEFKRGKLLSYLDVEGNSINMVQMTFLKLLTASARQNFTYHCHQSAAWYDVSSGSYDKALRFLGSNDEEMSYDNNPFIK--TLYDGCASRKGYE-KTVIEINTPKIDQVPIVDVMINDFGDQNQKFGFEVGPVCF 1215 HSP 2 Score: 126.716 bits (317), Expect = 7.153e-28 Identity = 68/215 (31.63%), Postives = 105/215 (48.84%), Query Frame = -1
Query: 412 IKNPQGTKEVPARTCKHLSSVNPQAPDGEYWIDPNGGRIEDAVKVYCKISE-QKTCIKSIDNNLSIRSWNSPILNGPTWLQKLINKNEIQY------SVPNNQLAFLKVYSDNAVQRVTFNCENHPIIGNEKIFNKVTAPRLL-ADDDSIIKMTHPKLKYSVIKDECQYSKSSEAESVIEVKD-VANLLPIRDVGIHIINNRKSKFGLTIEDVCF 1029
+K P GT+ PARTCK L +P PDGEYWIDPN G D+ KVYC + +TCI + +R + P +W + + Y S+ Q+ FLK+ + +A Q T++C + + A R L ++D+ + +P +K + D C K E ++VIE+ + +PI DV I+ ++ KFG + VCF
Sbjct: 1004 MKFPMGTQTNPARTCKDLQLSHPDFPDGEYWIDPNQGCSGDSFKVYCNFTSGGETCIYPDKKSEGVRISSWPKEKPGSWFSEFKRGKLLSYLDVEGNSINMVQMTFLKLLTASARQNFTYHCHQSAAWYDVSSGSYDKALRFLGSNDEEMSYDNNPFIK--TLYDGCASRKGYE-KTVIEINTPKIDQVPIVDVMINDFGDQNQKFGFEVGPVCF 1215
BLAST of collagen vs. RefSeq Human
Match: gi|767902460|ref|XP_011539023.1| (PREDICTED: collagen alpha-1(XI) chain isoform X3 [Homo sapiens]) HSP 1 Score: 120.939 bits (302), Expect = 3.608e-26 Identity = 68/215 (31.63%), Postives = 105/215 (48.84%), Query Frame = 1
Query: 8164 IKNPQGTKEVPARTCKHLSSVNPQAPDGEYWIDPNGGRIEDAVKVYCKISE-QKTCIKSIDNNLSIRSWNSPILNGPTWLQKLINKNEIQY------SVPNNQLAFLKVYSDNAVQRVTFNCENHPIIGNEKIFNKVTAPRLL-ADDDSIIKMTHPKLKYSVIKDECQYSKSSEAESVIEVKD-VANLLPIRDVGIHIINNRKSKFGLTIEDVCF 8781
+K P GT+ PARTCK L +P PDGEYWIDPN G D+ KVYC + +TCI + +R + P +W + + Y S+ Q+ FLK+ + +A Q T++C + + A R L ++D+ + +P +K + D C K E ++VIE+ + +PI DV I+ ++ KFG + VCF
Sbjct: 789 MKFPMGTQTNPARTCKDLQLSHPDFPDGEYWIDPNQGCSGDSFKVYCNFTSGGETCIYPDKKSEGVRISSWPKEKPGSWFSEFKRGKLLSYLDVEGNSINMVQMTFLKLLTASARQNFTYHCHQSAAWYDVSSGSYDKALRFLGSNDEEMSYDNNPFIK--TLYDGCASRKGYE-KTVIEINTPKIDQVPIVDVMINDFGDQNQKFGFEVGPVCF 1000 HSP 2 Score: 120.939 bits (302), Expect = 3.608e-26 Identity = 68/215 (31.63%), Postives = 105/215 (48.84%), Query Frame = -1
Query: 412 IKNPQGTKEVPARTCKHLSSVNPQAPDGEYWIDPNGGRIEDAVKVYCKISE-QKTCIKSIDNNLSIRSWNSPILNGPTWLQKLINKNEIQY------SVPNNQLAFLKVYSDNAVQRVTFNCENHPIIGNEKIFNKVTAPRLL-ADDDSIIKMTHPKLKYSVIKDECQYSKSSEAESVIEVKD-VANLLPIRDVGIHIINNRKSKFGLTIEDVCF 1029
+K P GT+ PARTCK L +P PDGEYWIDPN G D+ KVYC + +TCI + +R + P +W + + Y S+ Q+ FLK+ + +A Q T++C + + A R L ++D+ + +P +K + D C K E ++VIE+ + +PI DV I+ ++ KFG + VCF
Sbjct: 789 MKFPMGTQTNPARTCKDLQLSHPDFPDGEYWIDPNQGCSGDSFKVYCNFTSGGETCIYPDKKSEGVRISSWPKEKPGSWFSEFKRGKLLSYLDVEGNSINMVQMTFLKLLTASARQNFTYHCHQSAAWYDVSSGSYDKALRFLGSNDEEMSYDNNPFIK--TLYDGCASRKGYE-KTVIEINTPKIDQVPIVDVMINDFGDQNQKFGFEVGPVCF 1000
BLAST of collagen vs. RefSeq Human
Match: gi|299523253|ref|NP_542197.3| (collagen alpha-1(XI) chain isoform C preproprotein [Homo sapiens]) HSP 1 Score: 120.939 bits (302), Expect = 4.625e-26 Identity = 68/215 (31.63%), Postives = 105/215 (48.84%), Query Frame = 1
Query: 8164 IKNPQGTKEVPARTCKHLSSVNPQAPDGEYWIDPNGGRIEDAVKVYCKISE-QKTCIKSIDNNLSIRSWNSPILNGPTWLQKLINKNEIQY------SVPNNQLAFLKVYSDNAVQRVTFNCENHPIIGNEKIFNKVTAPRLL-ADDDSIIKMTHPKLKYSVIKDECQYSKSSEAESVIEVKD-VANLLPIRDVGIHIINNRKSKFGLTIEDVCF 8781
+K P GT+ PARTCK L +P PDGEYWIDPN G D+ KVYC + +TCI + +R + P +W + + Y S+ Q+ FLK+ + +A Q T++C + + A R L ++D+ + +P +K + D C K E ++VIE+ + +PI DV I+ ++ KFG + VCF
Sbjct: 1477 MKFPMGTQTNPARTCKDLQLSHPDFPDGEYWIDPNQGCSGDSFKVYCNFTSGGETCIYPDKKSEGVRISSWPKEKPGSWFSEFKRGKLLSYLDVEGNSINMVQMTFLKLLTASARQNFTYHCHQSAAWYDVSSGSYDKALRFLGSNDEEMSYDNNPFIK--TLYDGCASRKGYE-KTVIEINTPKIDQVPIVDVMINDFGDQNQKFGFEVGPVCF 1688 HSP 2 Score: 120.939 bits (302), Expect = 4.625e-26 Identity = 68/215 (31.63%), Postives = 105/215 (48.84%), Query Frame = -1
Query: 412 IKNPQGTKEVPARTCKHLSSVNPQAPDGEYWIDPNGGRIEDAVKVYCKISE-QKTCIKSIDNNLSIRSWNSPILNGPTWLQKLINKNEIQY------SVPNNQLAFLKVYSDNAVQRVTFNCENHPIIGNEKIFNKVTAPRLL-ADDDSIIKMTHPKLKYSVIKDECQYSKSSEAESVIEVKD-VANLLPIRDVGIHIINNRKSKFGLTIEDVCF 1029
+K P GT+ PARTCK L +P PDGEYWIDPN G D+ KVYC + +TCI + +R + P +W + + Y S+ Q+ FLK+ + +A Q T++C + + A R L ++D+ + +P +K + D C K E ++VIE+ + +PI DV I+ ++ KFG + VCF
Sbjct: 1477 MKFPMGTQTNPARTCKDLQLSHPDFPDGEYWIDPNQGCSGDSFKVYCNFTSGGETCIYPDKKSEGVRISSWPKEKPGSWFSEFKRGKLLSYLDVEGNSINMVQMTFLKLLTASARQNFTYHCHQSAAWYDVSSGSYDKALRFLGSNDEEMSYDNNPFIK--TLYDGCASRKGYE-KTVIEINTPKIDQVPIVDVMINDFGDQNQKFGFEVGPVCF 1688
BLAST of collagen vs. RefSeq Human
Match: gi|299523257|ref|NP_001177638.1| (collagen alpha-1(XI) chain isoform E preproprotein [Homo sapiens]) HSP 1 Score: 119.783 bits (299), Expect = 1.095e-25 Identity = 68/215 (31.63%), Postives = 105/215 (48.84%), Query Frame = 1
Query: 8164 IKNPQGTKEVPARTCKHLSSVNPQAPDGEYWIDPNGGRIEDAVKVYCKISE-QKTCIKSIDNNLSIRSWNSPILNGPTWLQKLINKNEIQY------SVPNNQLAFLKVYSDNAVQRVTFNCENHPIIGNEKIFNKVTAPRLL-ADDDSIIKMTHPKLKYSVIKDECQYSKSSEAESVIEVKD-VANLLPIRDVGIHIINNRKSKFGLTIEDVCF 8781
+K P GT+ PARTCK L +P PDGEYWIDPN G D+ KVYC + +TCI + +R + P +W + + Y S+ Q+ FLK+ + +A Q T++C + + A R L ++D+ + +P +K + D C K E ++VIE+ + +PI DV I+ ++ KFG + VCF
Sbjct: 1554 MKFPMGTQTNPARTCKDLQLSHPDFPDGEYWIDPNQGCSGDSFKVYCNFTSGGETCIYPDKKSEGVRISSWPKEKPGSWFSEFKRGKLLSYLDVEGNSINMVQMTFLKLLTASARQNFTYHCHQSAAWYDVSSGSYDKALRFLGSNDEEMSYDNNPFIK--TLYDGCASRKGYE-KTVIEINTPKIDQVPIVDVMINDFGDQNQKFGFEVGPVCF 1765 HSP 2 Score: 119.783 bits (299), Expect = 1.095e-25 Identity = 68/215 (31.63%), Postives = 105/215 (48.84%), Query Frame = -1
Query: 412 IKNPQGTKEVPARTCKHLSSVNPQAPDGEYWIDPNGGRIEDAVKVYCKISE-QKTCIKSIDNNLSIRSWNSPILNGPTWLQKLINKNEIQY------SVPNNQLAFLKVYSDNAVQRVTFNCENHPIIGNEKIFNKVTAPRLL-ADDDSIIKMTHPKLKYSVIKDECQYSKSSEAESVIEVKD-VANLLPIRDVGIHIINNRKSKFGLTIEDVCF 1029
+K P GT+ PARTCK L +P PDGEYWIDPN G D+ KVYC + +TCI + +R + P +W + + Y S+ Q+ FLK+ + +A Q T++C + + A R L ++D+ + +P +K + D C K E ++VIE+ + +PI DV I+ ++ KFG + VCF
Sbjct: 1554 MKFPMGTQTNPARTCKDLQLSHPDFPDGEYWIDPNQGCSGDSFKVYCNFTSGGETCIYPDKKSEGVRISSWPKEKPGSWFSEFKRGKLLSYLDVEGNSINMVQMTFLKLLTASARQNFTYHCHQSAAWYDVSSGSYDKALRFLGSNDEEMSYDNNPFIK--TLYDGCASRKGYE-KTVIEINTPKIDQVPIVDVMINDFGDQNQKFGFEVGPVCF 1765
BLAST of collagen vs. RefSeq Drosophila melanogaster
Match: gi|17137252|ref|NP_477190.1| (viking, isoform A [Drosophila melanogaster]) HSP 1 Score: 61.2326 bits (147), Expect = 2.180e-8 Identity = 93/241 (38.59%), Postives = 116/241 (48.13%), Query Frame = 1
Query: 5611 GTRGPIGPVGINGRPGKKGELGDIGLTGPQGISGPRGKRGRVGNPGEGGPKGSQGDQGPIGL---EGRAGVLGP--KGQKGDXXXXXXXXXXXXXXXXXXXXXDGVKGSRGESGPNGAPGDPGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVGPNGPDGKSGNKGAIGPTGQPGVRG---------SIGNPGKDGALGPMGTSGMRGPPGNIGVEGSKGNKGPPGS 6291
G RGP G G G PG G G IGLTGP+G+ G +G GR G+ G GP G G+ G +G +G+A +G KG+ GD G G G+ G G G G DG KG RGE+G G GD G G+ G G G G PG + +G G DG G +G G TG GV+G + G PG+DG GP G G +G G IG+ G G++GP G
Sbjct: 534 GPRGPRGQEGDTGYPGSHGNRGAIGLTGPRGVQGLQGNPGRAGHKGLPGPAGIPGEPGKVGAAGPDGKAIEVGSLRKGEIGDTGDSGHRGDTGDDGEKGRDGSDGSKGERGETGQRGDYGDAGYQGRDGEPGRDGRDGAPGRNATTPKVYL---------------IGEPGYDGIKGERGDDGDTGFKGVKGEPNPGQIYDNTGEPGEDGYTGPKGVKGAKGEQGAIGLRGEIGDRGPAGE 759 HSP 2 Score: 61.2326 bits (147), Expect = 2.180e-8 Identity = 93/241 (38.59%), Postives = 116/241 (48.13%), Query Frame = -1
Query: 2902 GTRGPIGPVGINGRPGKKGELGDIGLTGPQGISGPRGKRGRVGNPGEGGPKGSQGDQGPIGL---EGRAGVLGP--KGQKGDXXXXXXXXXXXXXXXXXXXXPDGVKGSRGESGPNGAPGDPGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEVGPNGPDGKSGNKGAIGPTGQPGVRG---------SIGNPGKDGALGPMGTSGMRGPPGNIGVEGSKGNKGPPGS 3582
G RGP G G G PG G G IGLTGP+G+ G +G GR G+ G GP G G+ G +G +G+A +G KG+ GD G G G+ G G G G DG KG RGE+G G GD G G+ G G G G PG + +G G DG G +G G TG GV+G + G PG+DG GP G G +G G IG+ G G++GP G
Sbjct: 534 GPRGPRGQEGDTGYPGSHGNRGAIGLTGPRGVQGLQGNPGRAGHKGLPGPAGIPGEPGKVGAAGPDGKAIEVGSLRKGEIGDTGDSGHRGDTGDDGEKGRDGSDGSKGERGETGQRGDYGDAGYQGRDGEPGRDGRDGAPGRNATTPKVYL---------------IGEPGYDGIKGERGDDGDTGFKGVKGEPNPGQIYDNTGEPGEDGYTGPKGVKGAKGEQGAIGLRGEIGDRGPAGE 759
BLAST of collagen vs. RefSeq Drosophila melanogaster
Match: gi|442626067|ref|NP_001260071.1| (viking, isoform B [Drosophila melanogaster]) HSP 1 Score: 61.2326 bits (147), Expect = 2.180e-8 Identity = 93/241 (38.59%), Postives = 116/241 (48.13%), Query Frame = 1
Query: 5611 GTRGPIGPVGINGRPGKKGELGDIGLTGPQGISGPRGKRGRVGNPGEGGPKGSQGDQGPIGL---EGRAGVLGP--KGQKGDXXXXXXXXXXXXXXXXXXXXXDGVKGSRGESGPNGAPGDPGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVGPNGPDGKSGNKGAIGPTGQPGVRG---------SIGNPGKDGALGPMGTSGMRGPPGNIGVEGSKGNKGPPGS 6291
G RGP G G G PG G G IGLTGP+G+ G +G GR G+ G GP G G+ G +G +G+A +G KG+ GD G G G+ G G G G DG KG RGE+G G GD G G+ G G G G PG + +G G DG G +G G TG GV+G + G PG+DG GP G G +G G IG+ G G++GP G
Sbjct: 534 GPRGPRGQEGDTGYPGSHGNRGAIGLTGPRGVQGLQGNPGRAGHKGLPGPAGIPGEPGKVGAAGPDGKAIEVGSLRKGEIGDTGDSGHRGDTGDDGEKGRDGSDGSKGERGETGQRGDYGDAGYQGRDGEPGRDGRDGAPGRNATTPKVYL---------------IGEPGYDGIKGERGDDGDTGFKGVKGEPNPGQIYDNTGEPGEDGYTGPKGVKGAKGEQGAIGLRGEIGDRGPAGE 759 HSP 2 Score: 61.2326 bits (147), Expect = 2.180e-8 Identity = 93/241 (38.59%), Postives = 116/241 (48.13%), Query Frame = -1
Query: 2902 GTRGPIGPVGINGRPGKKGELGDIGLTGPQGISGPRGKRGRVGNPGEGGPKGSQGDQGPIGL---EGRAGVLGP--KGQKGDXXXXXXXXXXXXXXXXXXXXPDGVKGSRGESGPNGAPGDPGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEVGPNGPDGKSGNKGAIGPTGQPGVRG---------SIGNPGKDGALGPMGTSGMRGPPGNIGVEGSKGNKGPPGS 3582
G RGP G G G PG G G IGLTGP+G+ G +G GR G+ G GP G G+ G +G +G+A +G KG+ GD G G G+ G G G G DG KG RGE+G G GD G G+ G G G G PG + +G G DG G +G G TG GV+G + G PG+DG GP G G +G G IG+ G G++GP G
Sbjct: 534 GPRGPRGQEGDTGYPGSHGNRGAIGLTGPRGVQGLQGNPGRAGHKGLPGPAGIPGEPGKVGAAGPDGKAIEVGSLRKGEIGDTGDSGHRGDTGDDGEKGRDGSDGSKGERGETGQRGDYGDAGYQGRDGEPGRDGRDGAPGRNATTPKVYL---------------IGEPGYDGIKGERGDDGDTGFKGVKGEPNPGQIYDNTGEPGEDGYTGPKGVKGAKGEQGAIGLRGEIGDRGPAGE 759
BLAST of collagen vs. RefSeq Drosophila melanogaster
Match: gi|442626069|ref|NP_001260072.1| (viking, isoform C [Drosophila melanogaster]) HSP 1 Score: 61.2326 bits (147), Expect = 2.180e-8 Identity = 93/241 (38.59%), Postives = 116/241 (48.13%), Query Frame = 1
Query: 5611 GTRGPIGPVGINGRPGKKGELGDIGLTGPQGISGPRGKRGRVGNPGEGGPKGSQGDQGPIGL---EGRAGVLGP--KGQKGDXXXXXXXXXXXXXXXXXXXXXDGVKGSRGESGPNGAPGDPGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVGPNGPDGKSGNKGAIGPTGQPGVRG---------SIGNPGKDGALGPMGTSGMRGPPGNIGVEGSKGNKGPPGS 6291
G RGP G G G PG G G IGLTGP+G+ G +G GR G+ G GP G G+ G +G +G+A +G KG+ GD G G G+ G G G G DG KG RGE+G G GD G G+ G G G G PG + +G G DG G +G G TG GV+G + G PG+DG GP G G +G G IG+ G G++GP G
Sbjct: 534 GPRGPRGQEGDTGYPGSHGNRGAIGLTGPRGVQGLQGNPGRAGHKGLPGPAGIPGEPGKVGAAGPDGKAIEVGSLRKGEIGDTGDSGHRGDTGDDGEKGRDGSDGSKGERGETGQRGDYGDAGYQGRDGEPGRDGRDGAPGRNATTPKVYL---------------IGEPGYDGIKGERGDDGDTGFKGVKGEPNPGQIYDNTGEPGEDGYTGPKGVKGAKGEQGAIGLRGEIGDRGPAGE 759 HSP 2 Score: 61.2326 bits (147), Expect = 2.180e-8 Identity = 93/241 (38.59%), Postives = 116/241 (48.13%), Query Frame = -1
Query: 2902 GTRGPIGPVGINGRPGKKGELGDIGLTGPQGISGPRGKRGRVGNPGEGGPKGSQGDQGPIGL---EGRAGVLGP--KGQKGDXXXXXXXXXXXXXXXXXXXXPDGVKGSRGESGPNGAPGDPGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEVGPNGPDGKSGNKGAIGPTGQPGVRG---------SIGNPGKDGALGPMGTSGMRGPPGNIGVEGSKGNKGPPGS 3582
G RGP G G G PG G G IGLTGP+G+ G +G GR G+ G GP G G+ G +G +G+A +G KG+ GD G G G+ G G G G DG KG RGE+G G GD G G+ G G G G PG + +G G DG G +G G TG GV+G + G PG+DG GP G G +G G IG+ G G++GP G
Sbjct: 534 GPRGPRGQEGDTGYPGSHGNRGAIGLTGPRGVQGLQGNPGRAGHKGLPGPAGIPGEPGKVGAAGPDGKAIEVGSLRKGEIGDTGDSGHRGDTGDDGEKGRDGSDGSKGERGETGQRGDYGDAGYQGRDGEPGRDGRDGAPGRNATTPKVYL---------------IGEPGYDGIKGERGDDGDTGFKGVKGEPNPGQIYDNTGEPGEDGYTGPKGVKGAKGEQGAIGLRGEIGDRGPAGE 759
BLAST of collagen vs. RefSeq Drosophila melanogaster
Match: gi|45549584|ref|NP_573262.2| (CG6867 [Drosophila melanogaster]) HSP 1 Score: 59.3066 bits (142), Expect = 6.014e-8 Identity = 42/86 (48.84%), Postives = 47/86 (54.65%), Query Frame = 1
Query: 7600 SGGKGYDGQTGTSGKSGKIGAPGEKGADGKPGPNGLLGDTGLRGAKGKKGTDGT--PGREGKPGPRGAKGTKGPKGVPGYPGRPGI 7851
+G G DG+ G G+ G G PG GADGK G G G GL G GK G T G +G PG RG KG GP+G PG PG GI
Sbjct: 320 TGRAGLDGRDGVPGEPGLDGVPGRAGADGKNGLPGRDGKDGLHGKDGKDGLSITGPKGAQGPPGERGLKGIAGPRGRPGKPGTNGI 405 HSP 2 Score: 59.3066 bits (142), Expect = 6.014e-8 Identity = 42/86 (48.84%), Postives = 47/86 (54.65%), Query Frame = -1
Query: 1342 SGGKGYDGQTGTSGKSGKIGAPGEKGADGKPGPNGLLGDTGLRGAKGKKGTDGT--PGREGKPGPRGAKGTKGPKGVPGYPGRPGI 1593
+G G DG+ G G+ G G PG GADGK G G G GL G GK G T G +G PG RG KG GP+G PG PG GI
Sbjct: 320 TGRAGLDGRDGVPGEPGLDGVPGRAGADGKNGLPGRDGKDGLHGKDGKDGLSITGPKGAQGPPGERGLKGIAGPRGRPGKPGTNGI 405
BLAST of collagen vs. RefSeq Drosophila melanogaster
Match: gi|24581820|ref|NP_723044.1| (collagen type IV, isoform A [Drosophila melanogaster]) HSP 1 Score: 58.151 bits (139), Expect = 1.629e-7 Identity = 130/392 (33.16%), Postives = 166/392 (42.35%), Query Frame = 1
Query: 5197 GVTGPPGARGEQGPAGPVGKEGLSGAPGFVGPTGEKGDTGPPGEQGDLGDIXXXXXXXXXXXXXXXXXXXXXXNVGERGPVGPDGMIGPPGPEGKIGSPGSPXXXX--XXXXXXXXXXXXXXXXXXXXXXXXLDGKSGKPGTRGPIGP---VGINGRPGKKGELGDIGLTGPQGISGPRGKRGRVGNPGEGGPKGS------QGDQGPIGLEGRAGVLGPKGQKGDXXXXXXXXXXXXXXXXXXXXXDGVKGSRGESGPNGAPGDPGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVGPNGPDGKSGNKGAIGPTGQPGV---------------RGSIGNPGKDGALGPMGTSGMRGPPGNIGVEGSKGNKGPPGSR 6294
G++G PG +GE GPVG +G +GAPG P GE+G G PG + DI + GERG GP G+ G G G G PG+ G G E G G+ GL G+ G+ G +G IG +G G PG GE G +GL GP G +G +G+RG G+PG+ G G +GD GP G +G G+ G +GQKGD+G G G +G G +G G G G G GP GAPG+ G GP G DG+ G G G G+PG+ G G PG+ G G +G G RG G G+ G GN G PG +
Sbjct: 1180 GLSGLPGLKGE---TGPVGLQGFTGAPG---PKGERGIRGQPGLPATVPDIRGDKGSQGERGYTGEKG-----EQGERGLTGPAGVAGAKGDRGLQGPPGASGLNGIPGAKGDIGPRGEIGYPGVTIKGEKGLPGRPGRNGRQGLIGAPGLIGERGLPGLAGEPGLVGLPGPIGPAGSKGERGLAGSPGQPGQDGFPGAPGLKGDTGPQGFKGERGLNGFEGQKGDKGDRGLQGPSGLPGLVGQKGDTGYPGLNGNDGPVGAPGERGF------------------------------------------TGPKGRDGRDGTPGLPGQKGEPGMLPPPGPKGEPGQPGRNGPKGEPGRPGERGLIGIQGERGEKGERGLIGETGNVGRPGPK 1518 HSP 2 Score: 58.151 bits (139), Expect = 1.629e-7 Identity = 130/392 (33.16%), Postives = 166/392 (42.35%), Query Frame = -1
Query: 2899 GVTGPPGARGEQGPAGPVGKEGLSGAPGFVGPTGEKGDTGPPGEQGDLGDIXXXXXXXXXXXXXXXXXXXXXGNVGERGPVGPDGMIGPPGPEGKIGSPGSPXXXX--XXXXXXXXXXXXXXXXXXXXXXXGLDGKSGKPGTRGPIGP---VGINGRPGKKGELGDIGLTGPQGISGPRGKRGRVGNPGEGGPKGS------QGDQGPIGLEGRAGVLGPKGQKGDXXXXXXXXXXXXXXXXXXXXPDGVKGSRGESGPNGAPGDPGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEVGPNGPDGKSGNKGAIGPTGQPGV---------------RGSIGNPGKDGALGPMGTSGMRGPPGNIGVEGSKGNKGPPGSR 3996
G++G PG +GE GPVG +G +GAPG P GE+G G PG + DI + GERG GP G+ G G G G PG+ G G E G G+ GL G+ G+ G +G IG +G G PG GE G +GL GP G +G +G+RG G+PG+ G G +GD GP G +G G+ G +GQKGD+G G G +G G +G G G G G GP GAPG+ G GP G DG+ G G G G+PG+ G G PG+ G G +G G RG G G+ G GN G PG +
Sbjct: 1180 GLSGLPGLKGE---TGPVGLQGFTGAPG---PKGERGIRGQPGLPATVPDIRGDKGSQGERGYTGEKG-----EQGERGLTGPAGVAGAKGDRGLQGPPGASGLNGIPGAKGDIGPRGEIGYPGVTIKGEKGLPGRPGRNGRQGLIGAPGLIGERGLPGLAGEPGLVGLPGPIGPAGSKGERGLAGSPGQPGQDGFPGAPGLKGDTGPQGFKGERGLNGFEGQKGDKGDRGLQGPSGLPGLVGQKGDTGYPGLNGNDGPVGAPGERGF------------------------------------------TGPKGRDGRDGTPGLPGQKGEPGMLPPPGPKGEPGQPGRNGPKGEPGRPGERGLIGIQGERGEKGERGLIGETGNVGRPGPK 1518 HSP 3 Score: 56.225 bits (134), Expect = 7.333e-7 Identity = 124/377 (32.89%), Postives = 150/377 (39.79%), Query Frame = 1
Query: 5215 GARGEQGPAGPVGKEGLSGAPGFVGPTGEKGDTGPPGEQGDLGDIXXXXXXXXXXXXXXXXXXXXXXNVGERGPVGPDGMIGPPGPEGKIGSPGSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDGKSGKPGTRGPIGPVGINGRPGK---------KGELGDIGLTGPQGISGPRGKRGRVGNPGEGGPKGSQGDQGPIGLEGR--AGVLGP--------KGQKGDXXXXXXXXXXXXXXXXXXXXXDGVKGSRGESGPNGAPGDPGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVGPNGPDGKSGNKGAIGPTGQPGVRGSIGNPGKDGALGPMGTSGMRGPPGNIGVEGSKGNKGPPG 6288
G RG GP GP G +G G PG GP+G+KG G PG G GD GERG G G G PG +G G+PG+P G G G G+ G GL+G SG PG RG G +G G G+ KGE G+ G G G++GP+G G G G+ GP G++G +G GL+G A GP KG+KG+ + V G RG+ G G PG G GE GP G G G KG G G PG RG GN G G+ G G RG PG G+ G+ G KG PG
Sbjct: 89 GNRGLPGPLGPTGLKGEMGFPGMEGPSGDKGQKGDPGPYGQRGD------------------------KGERGSPGLHGQAGVPGVQGPAGNPGAP------------GINGKDGCDGQDGIPGLEGLSGMPGPRGYAGQLGSKGEKGEPAKENGDYAKGEKGEPGWRGTAGLAGPQGFPGEKGERGDSGPYGAKGPRGEHGLKGEKGASCYGPMKPGAPGIKGEKGEPASSFPVKPTHT-----------VMGPRGDMGQKGEPGLVGRK---------------------------------------GEPGPEGDTGLDGQKGEKGLPGGPGDRGRQGNFGPPGS---TGQKGDRGEPGLNGLPGNPGQKGEPG 376 HSP 4 Score: 56.225 bits (134), Expect = 7.333e-7 Identity = 124/377 (32.89%), Postives = 150/377 (39.79%), Query Frame = -1
Query: 2905 GARGEQGPAGPVGKEGLSGAPGFVGPTGEKGDTGPPGEQGDLGDIXXXXXXXXXXXXXXXXXXXXXGNVGERGPVGPDGMIGPPGPEGKIGSPGSPXXXXXXXXXXXXXXXXXXXXXXXXXXXGLDGKSGKPGTRGPIGPVGINGRPGK---------KGELGDIGLTGPQGISGPRGKRGRVGNPGEGGPKGSQGDQGPIGLEGR--AGVLGP--------KGQKGDXXXXXXXXXXXXXXXXXXXXPDGVKGSRGESGPNGAPGDPGLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEVGPNGPDGKSGNKGAIGPTGQPGVRGSIGNPGKDGALGPMGTSGMRGPPGNIGVEGSKGNKGPPG 3978
G RG GP GP G +G G PG GP+G+KG G PG G GD GERG G G G PG +G G+PG+P G G G G+ G GL+G SG PG RG G +G G G+ KGE G+ G G G++GP+G G G G+ GP G++G +G GL+G A GP KG+KG+ + V G RG+ G G PG G GE GP G G G KG G G PG RG GN G G+ G G RG PG G+ G+ G KG PG
Sbjct: 89 GNRGLPGPLGPTGLKGEMGFPGMEGPSGDKGQKGDPGPYGQRGD------------------------KGERGSPGLHGQAGVPGVQGPAGNPGAP------------GINGKDGCDGQDGIPGLEGLSGMPGPRGYAGQLGSKGEKGEPAKENGDYAKGEKGEPGWRGTAGLAGPQGFPGEKGERGDSGPYGAKGPRGEHGLKGEKGASCYGPMKPGAPGIKGEKGEPASSFPVKPTHT-----------VMGPRGDMGQKGEPGLVGRK---------------------------------------GEPGPEGDTGLDGQKGEKGLPGGPGDRGRQGNFGPPGS---TGQKGDRGEPGLNGLPGNPGQKGEPG 376 HSP 5 Score: 53.5286 bits (127), Expect = 4.656e-6 Identity = 96/262 (36.64%), Postives = 114/262 (43.51%), Query Frame = 1
Query: 5206 GPPGARGEQGPAGPVGKEGLSGAPGFVGPTGEKGDTGPPGEQGDLGDIXXXXXXXXXXXXXXXXXXXXXXNVGERGPVGPDGMIGPPGPEGKIGSPGSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDGKSGKPGTRGPIGPVGINGRPGKKGELGDIGLTGPQGISGPRGKRGRVGNPGE-------GGPKGSQGDQGPIGLEGRAGVLGPKGQKGDXXXXXXXXXXXXXXXXXXXXXDGVKGSRGESGPNGAPGDPGLN 5970
GP G RG+ GPAG G G G PG G GPPGE+GD G G GR G GE+G G G+ G PG +G +G+PG PG PG G G G G G PG RG G G++G PG KGE G +GL G G GP+G+RG G PG G KGSQG++G G +G G G G G V G++G+ G G PG GLN
Sbjct: 1070 GPSGLRGDTGPAGTPGWPGEKGLPGLA----VHGRAGPPGEKGDQGRSGIDGRDGIN---------------GEKGEQGLQGVWGQPGEKGSVGAPGIPGAPGMDGLPGAAGAPG---------------AVGYPGDRGDKGEPGLSGLPGLKGETGPVGLQGFTGAPGPKGERGIRGQPGLPATVPDIRGDKGSQGERGYTGEKGEQGERGLTGPAG------------------------VAGAKGDRGLQGPPGASGLN 1273 HSP 6 Score: 53.5286 bits (127), Expect = 4.656e-6 Identity = 96/262 (36.64%), Postives = 114/262 (43.51%), Query Frame = -1
Query: 3223 GPPGARGEQGPAGPVGKEGLSGAPGFVGPTGEKGDTGPPGEQGDLGDIXXXXXXXXXXXXXXXXXXXXXGNVGERGPVGPDGMIGPPGPEGKIGSPGSPXXXXXXXXXXXXXXXXXXXXXXXXXXXGLDGKSGKPGTRGPIGPVGINGRPGKKGELGDIGLTGPQGISGPRGKRGRVGNPGE-------GGPKGSQGDQGPIGLEGRAGVLGPKGQKGDXXXXXXXXXXXXXXXXXXXXPDGVKGSRGESGPNGAPGDPGLN 3987
GP G RG+ GPAG G G G PG G GPPGE+GD G G GR G GE+G G G+ G PG +G +G+PG PG PG G G G G G PG RG G G++G PG KGE G +GL G G GP+G+RG G PG G KGSQG++G G +G G G G G V G++G+ G G PG GLN
Sbjct: 1070 GPSGLRGDTGPAGTPGWPGEKGLPGLA----VHGRAGPPGEKGDQGRSGIDGRDGIN---------------GEKGEQGLQGVWGQPGEKGSVGAPGIPGAPGMDGLPGAAGAPG---------------AVGYPGDRGDKGEPGLSGLPGLKGETGPVGLQGFTGAPGPKGERGIRGQPGLPATVPDIRGDKGSQGERGYTGEKGEQGERGLTGPAG------------------------VAGAKGDRGLQGPPGASGLN 1273 The following BLAST results are available for this feature:
BLAST of collagen vs. uniprot
Analysis Date: 2016-03-07 (Dugesia dorotocephala BLASTX Swissprot Uniprot) Total hits: 5
BLAST of collagen vs. Smed Unigenes AA
Analysis Date: 2016-03-08 (Dugesia dorotocephala BLASTX Schmidtea mediterranea) Total hits: 5
BLAST of collagen vs. RefSeq Human
Analysis Date: 2016-03-08 (Dugesia dorotocephala BLASTX Human) Total hits: 5
BLAST of collagen vs. RefSeq Drosophila melanogaster
Analysis Date: 2016-03-08 (Dugesia dorotocephala BLASTX Drosophila melanogaster) Total hits: 5
Sequences
The following sequences are available for this feature:
mRNA sequence >Ddo_024746 ID=Ddo_024746|Name=collagen|organism=Dugesia dorotocephala|type=mRNA|length=9192bp Design Primers for collagen back to top protein sequence >Ddo_024746-protein ID=Ddo_024746-protein|Name=collagen|organism=Dugesia dorotocephala|type=polypeptide|length=1286bpback to top coding sequence >Ddo_024746.4930.8787 ID=Ddo_024746.4930.8787|Name=Ddo_024746.4930.8787|organism=Dugesia dorotocephala|type=CDS|length=3858bpback to top Gene Groups
collagen is similar in sequence to the genes of this group: GG1008
Gene Group Protein Sequences >SMU15002271 |
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