Overview
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Homology
BLAST of opsin-like vs. uniprot
Match: gi|129211|sp|P09241|OPSD_ENTDO (RecName: Full=Rhodopsin [Enteroctopus dofleini]) HSP 1 Score: 318.546 bits (815), Expect = 1.468e-96 Identity = 154/306 (50.33%), Postives = 229/306 (74.84%), Query Frame = 1 Query: 112 VHPYWREFELVPEVYHYLVGVYISFVGIAGVLGNLLVLYIFASAKSLRTPPNMFIMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXXNTMALISLDRYFVIAQPFQTMKSLTIKRAIIMLVFVWLYSLIWSTPPFFGFGNYVPEGFQTSCTFDYLTQSKGNIIFNIGMYIGNFVIPVAIIIFCYYQIVKAVRLHELEMLKMAQKMNASHPASMKTGAKKADVQAAKISVIIVFLYLISWTPYAVIALMALTGRRDHLNPYTAELPVLFAKTSAMYNPFIYAINHPKFR 1029 +HP+W +F+ +P+ +Y VG++I VGI G+LGN +V+Y+F+ KSL+TP NMFI++LA+ DL+FSA+NGFPL TIS+F +W +GK+ C++YG +GG+FGF+SINTMA+IS+DRY VI +P K ++ +RA +M++FVW++S++WS P F +G YVPEG TSC+FDYL+ F + MY F++P+ II FCY+ IV +V HE EM MA+++NA + GA A+++ AKIS++I+ +++SW+PYA+IAL+A G + + PY AELPVLFAK SA++NP +Y+++HPKFR Sbjct: 20 IHPHWAKFDPIPDAVYYSVGIFIGVVGIIGILGNGVVIYLFSKTKSLQTPANMFIINLAMSDLSFSAINGFPLKTISAFMKKWIFGKVACQLYGLLGGIFGFMSINTMAMISIDRYNVIGRPMAASKKMSHRRAFLMIIFVWMWSIVWSVGPVFNWGAYVPEGILTSCSFDYLSTDPSTRSFILCMYFCGFMLPIIIIAFCYFNIVMSVSNHEKEMAAMAKRLNAKELRKAQAGA-SAEMKLAKISMVIITQFMLSWSPYAIIALLAQFGPAEWVTPYAAELPVLFAKASAIHNPIVYSVSHPKFR 324 HSP 2 Score: 318.546 bits (815), Expect = 1.468e-96 Identity = 154/306 (50.33%), Postives = 229/306 (74.84%), Query Frame = -1 Query: 1894 VHPYWREFELVPEVYHYLVGVYISFVGIAGVLGNLLVLYIFASAKSLRTPPNMFIMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXINTMALISLDRYFVIAQPFQTMKSLTIKRAIIMLVFVWLYSLIWSTPPFFGFGNYVPEGFQTSCTFDYLTQSKGNIIFNIGMYIGNFVIPVAIIIFCYYQIVKAVRLHELEMLKMAQKMNASHPASMKTGAKKADVQAAKISVIIVFLYLISWTPYAVIALMALTGRRDHLNPYTAELPVLFAKTSAMYNPFIYAINHPKFR 2811 +HP+W +F+ +P+ +Y VG++I VGI G+LGN +V+Y+F+ KSL+TP NMFI++LA+ DL+FSA+NGFPL TIS+F +W +GK+ C++YG +GG+FGF+SINTMA+IS+DRY VI +P K ++ +RA +M++FVW++S++WS P F +G YVPEG TSC+FDYL+ F + MY F++P+ II FCY+ IV +V HE EM MA+++NA + GA A+++ AKIS++I+ +++SW+PYA+IAL+A G + + PY AELPVLFAK SA++NP +Y+++HPKFR Sbjct: 20 IHPHWAKFDPIPDAVYYSVGIFIGVVGIIGILGNGVVIYLFSKTKSLQTPANMFIINLAMSDLSFSAINGFPLKTISAFMKKWIFGKVACQLYGLLGGIFGFMSINTMAMISIDRYNVIGRPMAASKKMSHRRAFLMIIFVWMWSIVWSVGPVFNWGAYVPEGILTSCSFDYLSTDPSTRSFILCMYFCGFMLPIIIIAFCYFNIVMSVSNHEKEMAAMAKRLNAKELRKAQAGA-SAEMKLAKISMVIITQFMLSWSPYAIIALLAQFGPAEWVTPYAAELPVLFAKASAIHNPIVYSVSHPKFR 324
BLAST of opsin-like vs. uniprot
Match: gi|3024254|sp|O15973|OPSD1_MIZYE (RecName: Full=Rhodopsin, GQ-coupled; AltName: Full=GQ-rhodopsin [Mizuhopecten yessoensis]) HSP 1 Score: 309.301 bits (791), Expect = 1.577e-92 Identity = 172/401 (42.89%), Postives = 265/401 (66.08%), Query Frame = 1 Query: 52 NKTANVSKVP-WHWDSDFESIVHPYWREFELVPEVYHYLVGVYISFVGIAGVLGNLLVLYIFASAKSLRTPPNMFIMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXXNTMALISLDRYFVIAQPFQTMKSLTIKRAIIMLVFVWLYSLIWSTPPFFGFGNYVPEGFQTSCTFDYLTQSKGNIIFNIGMYIGNFVIPVAIIIFCYYQIVKAVRLHELEMLKMAQKMNASHPASMKTGAKKADVQAAKISVIIVFLYLISWTPYAVIALMALTGRRDHLNPYTAELPVLFAKTSAMYNPFIYAINHPKFRIQLEXXXXXXXXXXXXXXXERDTTSVASATKPSKYQSEKESSMSQLDSEDDKQNVETNKGQAASGHTNEAYESE 1251 N T N S P W+ ++ VH +W +F V E +HY++GVYI+ VG+ G++GN V+YIF++ KSLR+P N+F+++LA+ DL FSAVNGFPLLT+SSF+ +W +G L C++YGF+GG+FG +SINT+ IS+DRY VI +P Q +++T ++ +M+V VW+ S++ S PPFFG+G Y+PEGFQTSCTFDYLT++ + + +Y+ F+IP+ II CY I++ VR H+ +ML + + M + A +++++ +KI++ + L++ISW+PYA+IAL+A G + P +ELP++ AK+S+M+NP +YA++HPKFR L ++ P L CCC PK K TSV S ++ +S S + + D T G + G T E+ Sbjct: 15 NGTLNRSMTPNTGWEGPYDMSVHLHWTQFPPVTEEWHYIIGVYITIVGLLGIMGNTTVVYIFSNTKSLRSPSNLFVVNLAVSDLIFSAVNGFPLLTVSSFHQKWIFGSLFCQLYGFVGGVFGLMSINTLTAISIDRYVVITKPLQASQTMTRRKVHLMIVIVWVLSILLSIPPFFGWGAYIPEGFQTSCTFDYLTKTARTRTYIVVLYLFGFLIPLIIIGVCYVLIIRGVRRHDQKMLTITRSMK-TEDARANNKRARSELRISKIAMTVTCLFIISWSPYAIIALIAQFGPAHWITPLVSELPMMLAKSSSMHNPVVYALSHPKFRKALYQRVPWLFCCCKPKEKADFRTSVCSKRSVTRTESVNSDVSSVISNLSDS---TTTLGLTSEGATRANRETS 411 HSP 2 Score: 309.301 bits (791), Expect = 1.577e-92 Identity = 172/401 (42.89%), Postives = 265/401 (66.08%), Query Frame = -1 Query: 1672 NKTANVSKVP-WHWDSDFESIVHPYWREFELVPEVYHYLVGVYISFVGIAGVLGNLLVLYIFASAKSLRTPPNMFIMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXINTMALISLDRYFVIAQPFQTMKSLTIKRAIIMLVFVWLYSLIWSTPPFFGFGNYVPEGFQTSCTFDYLTQSKGNIIFNIGMYIGNFVIPVAIIIFCYYQIVKAVRLHELEMLKMAQKMNASHPASMKTGAKKADVQAAKISVIIVFLYLISWTPYAVIALMALTGRRDHLNPYTAELPVLFAKTSAMYNPFIYAINHPKFRIQLEXXXXXXXXXXXXXXKERDTTSVASATKPSKYQSEKESSMSQLDSEDDKQNVETNKGQAASGHTNEAYESE 2871 N T N S P W+ ++ VH +W +F V E +HY++GVYI+ VG+ G++GN V+YIF++ KSLR+P N+F+++LA+ DL FSAVNGFPLLT+SSF+ +W +G L C++YGF+GG+FG +SINT+ IS+DRY VI +P Q +++T ++ +M+V VW+ S++ S PPFFG+G Y+PEGFQTSCTFDYLT++ + + +Y+ F+IP+ II CY I++ VR H+ +ML + + M + A +++++ +KI++ + L++ISW+PYA+IAL+A G + P +ELP++ AK+S+M+NP +YA++HPKFR L ++ P L CCC PK K TSV S ++ +S S + + D T G + G T E+ Sbjct: 15 NGTLNRSMTPNTGWEGPYDMSVHLHWTQFPPVTEEWHYIIGVYITIVGLLGIMGNTTVVYIFSNTKSLRSPSNLFVVNLAVSDLIFSAVNGFPLLTVSSFHQKWIFGSLFCQLYGFVGGVFGLMSINTLTAISIDRYVVITKPLQASQTMTRRKVHLMIVIVWVLSILLSIPPFFGWGAYIPEGFQTSCTFDYLTKTARTRTYIVVLYLFGFLIPLIIIGVCYVLIIRGVRRHDQKMLTITRSMK-TEDARANNKRARSELRISKIAMTVTCLFIISWSPYAIIALIAQFGPAHWITPLVSELPMMLAKSSSMHNPVVYALSHPKFRKALYQRVPWLFCCCKPKEKADFRTSVCSKRSVTRTESVNSDVSSVISNLSDS---TTTLGLTSEGATRANRETS 411
BLAST of opsin-like vs. uniprot
Match: gi|129209|sp|P24603|OPSD_LOLFO (RecName: Full=Rhodopsin [Loligo forbesii]) HSP 1 Score: 297.36 bits (760), Expect = 1.056e-88 Identity = 160/351 (45.58%), Postives = 239/351 (68.09%), Query Frame = 1 Query: 112 VHPYWREFELVPEVYHYLVGVYISFVGIAGVLGNLLVLYIFASAKSLRTPPNMFIMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXXNTMALISLDRYFVIAQPFQTMKSLTIKRAIIMLVFVWLYSLIWSTPPFFGFGNYVPEGFQTSCTFDYLTQ---SKGNIIFNIGMYIGNFVIPVAIIIFCYYQIVKAVRLHELEMLKMAQKMNASHPASMKTGAKKADVQAAKISVIIVFLYLISWTPYAVIALMALTGRRDHLNPYTAELPVLFAKTSAMYNPFIYAINHPKFRIQLEXXXXXXXXXXXXXXXERDTTSVASATKPSKYQSEKESS 1155 +HP+W++F+ VP +Y +G++I+ GI G +GN +V+Y+F KSL+TP NMFI++LA D TFS VNGFPL+TIS F W +G C++YG IGG+FG +SI TM +IS+DRY VI +P K ++ ++A IM++FVW++S IW+ P FG+G Y EG +C+FDY+T+ ++ NI + MYI F+ P+ +I FCY+ IV +V HE EM MA+++NA + GA A+++ AKIS++IV +L+SW+PYAV+AL+A G + + PY A+LPV+FAK SA++NP IY+++HPKFR ++ FP ++ CC KE + A A P+ QS E++ Sbjct: 19 IHPHWKQFDQVPAAVYYSLGIFIAICGIIGCVGNGVVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFMKYWVFGNAACKVYGLIGGIFGLMSIMTMTMISIDRYNVIGRPMSASKKMSHRKAFIMIIFVWIWSTIWAIGPIFGWGAYTLEGVLCNCSFDYITRDTTTRSNI---LCMYIFAFMCPIVVIFFCYFNIVMSVSNHEKEMAAMAKRLNAKELRKAQAGA-NAEMKLAKISIVIVTQFLLSWSPYAVVALLAQFGPIEWVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFRERIASNFPWILTCCQYDEKEIEDDKDAEAEIPAGEQSGGETA 365 HSP 2 Score: 297.36 bits (760), Expect = 1.056e-88 Identity = 160/351 (45.58%), Postives = 239/351 (68.09%), Query Frame = -1 Query: 1768 VHPYWREFELVPEVYHYLVGVYISFVGIAGVLGNLLVLYIFASAKSLRTPPNMFIMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXINTMALISLDRYFVIAQPFQTMKSLTIKRAIIMLVFVWLYSLIWSTPPFFGFGNYVPEGFQTSCTFDYLTQ---SKGNIIFNIGMYIGNFVIPVAIIIFCYYQIVKAVRLHELEMLKMAQKMNASHPASMKTGAKKADVQAAKISVIIVFLYLISWTPYAVIALMALTGRRDHLNPYTAELPVLFAKTSAMYNPFIYAINHPKFRIQLEXXXXXXXXXXXXXXKERDTTSVASATKPSKYQSEKESS 2811 +HP+W++F+ VP +Y +G++I+ GI G +GN +V+Y+F KSL+TP NMFI++LA D TFS VNGFPL+TIS F W +G C++YG IGG+FG +SI TM +IS+DRY VI +P K ++ ++A IM++FVW++S IW+ P FG+G Y EG +C+FDY+T+ ++ NI + MYI F+ P+ +I FCY+ IV +V HE EM MA+++NA + GA A+++ AKIS++IV +L+SW+PYAV+AL+A G + + PY A+LPV+FAK SA++NP IY+++HPKFR ++ FP ++ CC KE + A A P+ QS E++ Sbjct: 19 IHPHWKQFDQVPAAVYYSLGIFIAICGIIGCVGNGVVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFMKYWVFGNAACKVYGLIGGIFGLMSIMTMTMISIDRYNVIGRPMSASKKMSHRKAFIMIIFVWIWSTIWAIGPIFGWGAYTLEGVLCNCSFDYITRDTTTRSNI---LCMYIFAFMCPIVVIFFCYFNIVMSVSNHEKEMAAMAKRLNAKELRKAQAGA-NAEMKLAKISIVIVTQFLLSWSPYAVVALLAQFGPIEWVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFRERIASNFPWILTCCQYDEKEIEDDKDAEAEIPAGEQSGGETA 365
BLAST of opsin-like vs. uniprot
Match: gi|2499376|sp|Q17094|OPSD_ALLSU (RecName: Full=Rhodopsin, partial [Alloteuthis subulata]) HSP 1 Score: 291.197 bits (744), Expect = 1.454e-86 Identity = 157/347 (45.24%), Postives = 230/347 (66.28%), Query Frame = 1 Query: 112 VHPYWREFELVPEVYHYLVGVYISFVGIAGVLGNLLVLYIFASAKSLRTPPNMFIMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXXNTMALISLDRYFVIAQPFQTMKSLTIKRAIIMLVFVWLYSLIWSTPPFFGFGNYVPEGFQTSCTFDYLTQSKGNIIFNIGMYIGNFVIPVAIIIFCYYQIVKAVRLHELEMLKMAQKMNASHPASMKTGAKKADVQAAKISVIIVFLYLISWTPYAVIALMALTGRRDHLNPYTAELPVLFAKTSAMYNPFIYAINHPKFRIQLEXXXXXXXXXXXXXXXERDTTSVASATKPSKYQSEKES 1152 +H +W++F+ VP +Y +G++I+ GI G GN +V+Y+F KSL+TP NMFI++LA D TFS VNGFP++TIS F W +G+ C++YG IGG+FG SI TM +IS+DRY VI +P K ++ ++A IM+VFVW++S IW+ P FG+G Y EG +C+FDY+T+ + MYI F+ P+ +I FCY+ IV +V HE EM MA+++NA + GA A+++ AKIS++IV L+SW+PYA++AL+A G + + PY A+LPV+FAK SA++NP IY+++HPKFR + FP ++ CC KE + A A P+ QS ES Sbjct: 12 IHSHWKQFDQVPAAVYYSLGIFIAICGIIGCAGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPMMTISCFLKHWVFGQAACKVYGLIGGIFGLTSIMTMTMISIDRYNVIRRPMSASKKMSHRKAFIMIVFVWIWSTIWAIGPIFGWGAYQLEGVLCNCSFDYITRDASTRSNIVCMYIFAFMFPIVVIFFCYFNIVMSVSNHEKEMAAMAKRLNAKELRKAQAGA-SAEMKLAKISIVIVTQSLLSWSPYAIVALLAQFGPIEWVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAIASNFPWILTCCQYDEKEIEDDKDAEAEIPAAEQSGGES 357 HSP 2 Score: 291.197 bits (744), Expect = 1.454e-86 Identity = 157/347 (45.24%), Postives = 230/347 (66.28%), Query Frame = -1 Query: 1771 VHPYWREFELVPEVYHYLVGVYISFVGIAGVLGNLLVLYIFASAKSLRTPPNMFIMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXINTMALISLDRYFVIAQPFQTMKSLTIKRAIIMLVFVWLYSLIWSTPPFFGFGNYVPEGFQTSCTFDYLTQSKGNIIFNIGMYIGNFVIPVAIIIFCYYQIVKAVRLHELEMLKMAQKMNASHPASMKTGAKKADVQAAKISVIIVFLYLISWTPYAVIALMALTGRRDHLNPYTAELPVLFAKTSAMYNPFIYAINHPKFRIQLEXXXXXXXXXXXXXXKERDTTSVASATKPSKYQSEKES 2811 +H +W++F+ VP +Y +G++I+ GI G GN +V+Y+F KSL+TP NMFI++LA D TFS VNGFP++TIS F W +G+ C++YG IGG+FG SI TM +IS+DRY VI +P K ++ ++A IM+VFVW++S IW+ P FG+G Y EG +C+FDY+T+ + MYI F+ P+ +I FCY+ IV +V HE EM MA+++NA + GA A+++ AKIS++IV L+SW+PYA++AL+A G + + PY A+LPV+FAK SA++NP IY+++HPKFR + FP ++ CC KE + A A P+ QS ES Sbjct: 12 IHSHWKQFDQVPAAVYYSLGIFIAICGIIGCAGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPMMTISCFLKHWVFGQAACKVYGLIGGIFGLTSIMTMTMISIDRYNVIRRPMSASKKMSHRKAFIMIVFVWIWSTIWAIGPIFGWGAYQLEGVLCNCSFDYITRDASTRSNIVCMYIFAFMFPIVVIFFCYFNIVMSVSNHEKEMAAMAKRLNAKELRKAQAGA-SAEMKLAKISIVIVTQSLLSWSPYAIVALLAQFGPIEWVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAIASNFPWILTCCQYDEKEIEDDKDAEAEIPAAEQSGGES 357
BLAST of opsin-like vs. uniprot
Match: gi|3024292|sp|O16005|OPSD_SEPOF (RecName: Full=Rhodopsin [Sepia officinalis]) HSP 1 Score: 283.108 bits (723), Expect = 2.450e-83 Identity = 169/375 (45.07%), Postives = 247/375 (65.87%), Query Frame = 1 Query: 31 IGQKLIENKTANVSKVPWHWDSDFESIVHPYWREFELVPEVYHYLVGVYISFVGIAGVLGNLLVLYIFASAKSLRTPPNMFIMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXXNTMALISLDRYFVIAQPFQTMKSLTIKRAIIMLVFVWLYSLIWSTPPFFGFGNYVPEGFQTSCTFDYLTQSKGNIIFNIGMYIGNFVIPVAIIIFCYYQIVKAVRLHELEMLKMAQKMNASHPASMKTGAKKADVQAAKISVIIVFLYLISWTPYAVIALMALTGRRDHLNPYTAELPVLFAKTSAMYNPFIYAINHPKFRIQLEXXXXXXXXXXXXXXXERDTTSVASATKPSKYQSEKESS 1155 +G+ + +N+T W ++ E VHP+W++F VP+ +Y +G++I GI G GN +V+Y+F KSL+TP NMFI++LA D TFS VNGFPL+TIS F +W +G C++YGFIGG+FG +SI TM++IS+DRY VI +P K ++ +RA +M++FVW++S +WS P FG+G YV EG +C+FDY+T+ + MYI F P+ II FCY+ IV AV HE EM MA+++NA + GA A+++ AKIS++IV +L+SW+PYAV+AL+A G + + PY A+LPV+FAK SA++NP IY+++HPKFR + + FP +I CC KE + A P+ QS ES+ Sbjct: 1 MGRDIPDNET-------WWYNPTME--VHPHWKQFNQVPDAVYYSLGIFIGICGIIGCTGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFIKKWVFGMAACKVYGFIGGIFGLMSIMTMSMISIDRYNVIGRPMAASKKMSHRRAFLMIIFVWMWSTLWSIGPIFGWGAYVLEGVLCNCSFDYITRDSATRSNIVCMYIFAFCFPILIIFFCYFNIVMAVSNHEKEMAAMAKRLNAKELRKAQAGA-SAEMKLAKISIVIVTQFLLSWSPYAVVALLAQFGPIEWVTPYAAQLPVMFAKASAIHNPLIYSVSHPKFREAIAENFPWIITCCQFDEKEVEDDKDAETEIPATEQSGGESA 365 HSP 2 Score: 283.108 bits (723), Expect = 2.450e-83 Identity = 169/375 (45.07%), Postives = 247/375 (65.87%), Query Frame = -1 Query: 1768 IGQKLIENKTANVSKVPWHWDSDFESIVHPYWREFELVPEVYHYLVGVYISFVGIAGVLGNLLVLYIFASAKSLRTPPNMFIMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXINTMALISLDRYFVIAQPFQTMKSLTIKRAIIMLVFVWLYSLIWSTPPFFGFGNYVPEGFQTSCTFDYLTQSKGNIIFNIGMYIGNFVIPVAIIIFCYYQIVKAVRLHELEMLKMAQKMNASHPASMKTGAKKADVQAAKISVIIVFLYLISWTPYAVIALMALTGRRDHLNPYTAELPVLFAKTSAMYNPFIYAINHPKFRIQLEXXXXXXXXXXXXXXKERDTTSVASATKPSKYQSEKESS 2892 +G+ + +N+T W ++ E VHP+W++F VP+ +Y +G++I GI G GN +V+Y+F KSL+TP NMFI++LA D TFS VNGFPL+TIS F +W +G C++YGFIGG+FG +SI TM++IS+DRY VI +P K ++ +RA +M++FVW++S +WS P FG+G YV EG +C+FDY+T+ + MYI F P+ II FCY+ IV AV HE EM MA+++NA + GA A+++ AKIS++IV +L+SW+PYAV+AL+A G + + PY A+LPV+FAK SA++NP IY+++HPKFR + + FP +I CC KE + A P+ QS ES+ Sbjct: 1 MGRDIPDNET-------WWYNPTME--VHPHWKQFNQVPDAVYYSLGIFIGICGIIGCTGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFIKKWVFGMAACKVYGFIGGIFGLMSIMTMSMISIDRYNVIGRPMAASKKMSHRRAFLMIIFVWMWSTLWSIGPIFGWGAYVLEGVLCNCSFDYITRDSATRSNIVCMYIFAFCFPILIIFFCYFNIVMAVSNHEKEMAAMAKRLNAKELRKAQAGA-SAEMKLAKISIVIVTQFLLSWSPYAVVALLAQFGPIEWVTPYAAQLPVMFAKASAIHNPLIYSVSHPKFREAIAENFPWIITCCQFDEKEVEDDKDAETEIPATEQSGGESA 365
BLAST of opsin-like vs. Smed Unigenes AA
Match: SMU15026624 (SmedSxldir_c84693_g1_i1|m.24953|m.19106) HSP 1 Score: 724.161 bits (1868), Expect = 0.000e+0 Identity = 381/419 (90.93%), Postives = 398/419 (94.99%), Query Frame = 1 Query: 7 MSVQSFLSIGQKLIENKTAN---VSKVPWHWDSDFESIVHPYWREFELVPEVYHYLVGVYISFVGIAGVLGNLLVLYIFASAKSLRTPPNMFIMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXXNTMALISLDRYFVIAQPFQTMKSLTIKRAIIMLVFVWLYSLIWSTPPFFGFGNYVPEGFQTSCTFDYLTQSKGNIIFNIGMYIGNFVIPVAIIIFCYYQIVKAVRLHELEMLKMAQKMNASHPASMKTGAKKADVQAAKISVIIVFLYLISWTPYAVIALMALTGRRDHLNPYTAELPVLFAKTSAMYNPFIYAINHPKFRIQLEXXXXXXXXXXXXXXXERDTTSVASATKPSKYQSEKESSMSQLDSEDDKQNVETNKGQAASGHTNEAYESEK 1254 MSVQSF ++G KL+EN T N ++K WHWD +FESIVHPYWR F++VPEVYHYLVGVYIS VGI+GVLGNLLVLYIFASAKSLRTPPNMFIMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEIYGFIGGLFGFISINTMALISLDRYFVIAQPFQTMKSLTIKRAIIMLVFVWLYSLIWSTPPFFG+GNYVPEGFQTSCTFDYLTQSKGNIIFNIGMYIGNF+IPV IIIFCYYQIVKAVR+HELEMLKMAQKMNASHP SMKTGAKKADVQAAKISVIIVFLY++SWTPYA+IALMALTGRRDHLNPYTAELPVLFAKTSAMYNPFIYAINHPKFRIQLEKKFPCLICCCPPKPKERDTTS ASATKPSKYQSE+ESSMSQLD EDDKQ VET K Q SGHTNEAYESE+ Sbjct: 13 MSVQSFANLGNKLLENATFNNESLTKSVWHWDPEFESIVHPYWRTFDMVPEVYHYLVGVYISIVGISGVLGNLLVLYIFASAKSLRTPPNMFIMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEIYGFIGGLFGFISINTMALISLDRYFVIAQPFQTMKSLTIKRAIIMLVFVWLYSLIWSTPPFFGYGNYVPEGFQTSCTFDYLTQSKGNIIFNIGMYIGNFIIPVGIIIFCYYQIVKAVRVHELEMLKMAQKMNASHPTSMKTGAKKADVQAAKISVIIVFLYMLSWTPYAIIALMALTGRRDHLNPYTAELPVLFAKTSAMYNPFIYAINHPKFRIQLEKKFPCLICCCPPKPKERDTTSAASATKPSKYQSERESSMSQLDPEDDKQVVETTKNQTTSGHTNEAYESEQ 431 HSP 2 Score: 724.161 bits (1868), Expect = 0.000e+0 Identity = 381/419 (90.93%), Postives = 398/419 (94.99%), Query Frame = -1 Query: 1669 MSVQSFLSIGQKLIENKTAN---VSKVPWHWDSDFESIVHPYWREFELVPEVYHYLVGVYISFVGIAGVLGNLLVLYIFASAKSLRTPPNMFIMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXINTMALISLDRYFVIAQPFQTMKSLTIKRAIIMLVFVWLYSLIWSTPPFFGFGNYVPEGFQTSCTFDYLTQSKGNIIFNIGMYIGNFVIPVAIIIFCYYQIVKAVRLHELEMLKMAQKMNASHPASMKTGAKKADVQAAKISVIIVFLYLISWTPYAVIALMALTGRRDHLNPYTAELPVLFAKTSAMYNPFIYAINHPKFRIQLEXXXXXXXXXXXXXXKERDTTSVASATKPSKYQSEKESSMSQLDSEDDKQNVETNKGQAASGHTNEAYESEK 2916 MSVQSF ++G KL+EN T N ++K WHWD +FESIVHPYWR F++VPEVYHYLVGVYIS VGI+GVLGNLLVLYIFASAKSLRTPPNMFIMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEIYGFIGGLFGFISINTMALISLDRYFVIAQPFQTMKSLTIKRAIIMLVFVWLYSLIWSTPPFFG+GNYVPEGFQTSCTFDYLTQSKGNIIFNIGMYIGNF+IPV IIIFCYYQIVKAVR+HELEMLKMAQKMNASHP SMKTGAKKADVQAAKISVIIVFLY++SWTPYA+IALMALTGRRDHLNPYTAELPVLFAKTSAMYNPFIYAINHPKFRIQLEKKFPCLICCCPPKPKERDTTS ASATKPSKYQSE+ESSMSQLD EDDKQ VET K Q SGHTNEAYESE+ Sbjct: 13 MSVQSFANLGNKLLENATFNNESLTKSVWHWDPEFESIVHPYWRTFDMVPEVYHYLVGVYISIVGISGVLGNLLVLYIFASAKSLRTPPNMFIMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEIYGFIGGLFGFISINTMALISLDRYFVIAQPFQTMKSLTIKRAIIMLVFVWLYSLIWSTPPFFGYGNYVPEGFQTSCTFDYLTQSKGNIIFNIGMYIGNFIIPVGIIIFCYYQIVKAVRVHELEMLKMAQKMNASHPTSMKTGAKKADVQAAKISVIIVFLYMLSWTPYAIIALMALTGRRDHLNPYTAELPVLFAKTSAMYNPFIYAINHPKFRIQLEKKFPCLICCCPPKPKERDTTSAASATKPSKYQSERESSMSQLDPEDDKQVVETTKNQTTSGHTNEAYESEQ 431
BLAST of opsin-like vs. Smed Unigenes AA
Match: SMU15032968 (SmedSxlregen_c81464_g11_i1|m.21191|m.10162) HSP 1 Score: 149.058 bits (375), Expect = 1.769e-38 Identity = 107/346 (30.92%), Postives = 176/346 (50.87%), Query Frame = 1 Query: 145 PEVYHY-LVGVYISFVGIAGVLGNLLVLYIFASAKSLRTPPNMFIMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXXNTMALISLDRYFVIAQPFQTMKSLTIKRAIIMLVFVWLYSLIWSTPPFFGFGNYVPEGFQTSCTFDYLT---QSKGNIIFNIGMYIGNFVIPVAIIIFCYYQIVKAVRLHELEMLKMAQKMNASHPASMKTGAKKADVQAAKISVIIVFLYLISWTPYAVIALMALTG-RRDHLNPYTAELPVLFAKTSAMYNPFIYAINHPKFRIQLEXXXXXXXXXXXXXXXERDTTSVASATK--PSKYQSEKESSMS 1161 PE + Y + GVYI F+G+ G + N V+ +F +K L TP N+F+ L D + GFP L +SSF W + C +Y F + G SI + +I+++R+ + P QT+K++T+KR+I ++ W +I S PP G+ YV EG Q SC+FD QSK I+ + IG F++ + II CY +I VR EM + K S + K + + + + +++SW PYA++ ++AL + + +P FAK+ + NP IY +N+P+F+ +L K L K + + T ++++ T+ PS Q+ S Sbjct: 15 PEAFVYDIYGVYILFIGLFGCIENGCVILVFIRSKLLWTPSNIFVFDLVCSDFLICTI-GFPFLMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSYIM----LLIGTFLLILTAIIICYVKIFFKVRDQIKEMRIVYTK---SFNNLQRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTILALCNVLTEKGSVLIVAIPAYFAKSFTICNPVIYILNYPQFKRELYKLLCILKQIPCKKKQSQTTQNLSTITRHVPSAVQTPPNQGTS 352 HSP 2 Score: 149.058 bits (375), Expect = 1.769e-38 Identity = 107/346 (30.92%), Postives = 176/346 (50.87%), Query Frame = -1 Query: 1762 PEVYHY-LVGVYISFVGIAGVLGNLLVLYIFASAKSLRTPPNMFIMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXINTMALISLDRYFVIAQPFQTMKSLTIKRAIIMLVFVWLYSLIWSTPPFFGFGNYVPEGFQTSCTFDYLT---QSKGNIIFNIGMYIGNFVIPVAIIIFCYYQIVKAVRLHELEMLKMAQKMNASHPASMKTGAKKADVQAAKISVIIVFLYLISWTPYAVIALMALTG-RRDHLNPYTAELPVLFAKTSAMYNPFIYAINHPKFRIQLEXXXXXXXXXXXXXXKERDTTSVASATK--PSKYQSEKESSMS 2778 PE + Y + GVYI F+G+ G + N V+ +F +K L TP N+F+ L D + GFP L +SSF W + C +Y F + G SI + +I+++R+ + P QT+K++T+KR+I ++ W +I S PP G+ YV EG Q SC+FD QSK I+ + IG F++ + II CY +I VR EM + K S + K + + + + +++SW PYA++ ++AL + + +P FAK+ + NP IY +N+P+F+ +L K L K + + T ++++ T+ PS Q+ S Sbjct: 15 PEAFVYDIYGVYILFIGLFGCIENGCVILVFIRSKLLWTPSNIFVFDLVCSDFLICTI-GFPFLMLSSFYQSWIFDISGCYVYAFSMSITGMHSIFILFVIAVERFNAVFYPLQTVKTVTVKRSIYFVICCWTLGVIISIPPLVGWNRYVLEGLQISCSFDMFDTSWQSKSYIM----LLIGTFLLILTAIIICYVKIFFKVRDQIKEMRIVYTK---SFNNLQRIKESKVERKLIYMGFNVTLFFVLSWGPYAMVTILALCNVLTEKGSVLIVAIPAYFAKSFTICNPVIYILNYPQFKRELYKLLCILKQIPCKKKQSQTTQNLSTITRHVPSAVQTPPNQGTS 352
BLAST of opsin-like vs. Smed Unigenes AA
Match: SMU15028515 (SmedSxldir_c96785_g1_i5|m.39594|m.45818) HSP 1 Score: 145.591 bits (366), Expect = 5.966e-37 Identity = 94/300 (31.33%), Postives = 159/300 (53.00%), Query Frame = 1 Query: 145 PEVY-HYLVGVYISFVGIAGVLGNLLVLYIFASAKSLRTPPNMFIMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXXNTMALISLDRYFVIAQPFQTMKSLTIKRAIIMLVFVWLYSLIWSTPPFFGFGNYVPEGFQTSCTFDYLT---QSKGNIIFNIGMYIGNFVIPVAIIIFCYYQIVKAVRLHELEMLKMAQKMNASHPASMKTGAKKADVQAAKI---SVIIVFLYLISWTPYAVIALMALTGRRDHLNPY-TAELPVLFAKTSAMYNPFIYAINHP 1020 PE Y +Y + YI +GI G N+LV+ +F +KS+ TP N+FI LA+ DL + GFP LTIS F W + + C Y F + G SI + +++++R VI++P + +K ++ KR+ ++++ W +++ S PP G+ YV EG SC++D +SK I+F IG+ F++ + IIIFCY + L++ + A M S A++ + K+ I +++SW PYA++ ++++ + N P FAK+ +YNP IY ++P Sbjct: 19 PETYVYYALASYILVIGIIGTAENMLVMLVFIRSKSMWTPSNVFIFDLALSDLLI-CILGFPFLTISGFCKEWIFSEAGCSAYAFSMSVTGMHSIFILTILAVERLKVISRPLKMVKIVSKKRSFLLVLISWTFAIFVSIPPLLGWNRYVLEGLHISCSYDMFDGSWRSKSYIVFLIGI----FLVVLLIIIFCYLALF-------LKVQRQATSMRVMIKDSRDLLAERERQRENKLIWMGCNITLAFVLSWGPYALVTILSIFKVLNEKNSLIIVTFPSFFAKSFTIYNPIIYIFSYP 306 HSP 2 Score: 145.591 bits (366), Expect = 5.966e-37 Identity = 94/300 (31.33%), Postives = 159/300 (53.00%), Query Frame = -1 Query: 1903 PEVY-HYLVGVYISFVGIAGVLGNLLVLYIFASAKSLRTPPNMFIMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXINTMALISLDRYFVIAQPFQTMKSLTIKRAIIMLVFVWLYSLIWSTPPFFGFGNYVPEGFQTSCTFDYLT---QSKGNIIFNIGMYIGNFVIPVAIIIFCYYQIVKAVRLHELEMLKMAQKMNASHPASMKTGAKKADVQAAKI---SVIIVFLYLISWTPYAVIALMALTGRRDHLNPY-TAELPVLFAKTSAMYNPFIYAINHP 2778 PE Y +Y + YI +GI G N+LV+ +F +KS+ TP N+FI LA+ DL + GFP LTIS F W + + C Y F + G SI + +++++R VI++P + +K ++ KR+ ++++ W +++ S PP G+ YV EG SC++D +SK I+F IG+ F++ + IIIFCY + L++ + A M S A++ + K+ I +++SW PYA++ ++++ + N P FAK+ +YNP IY ++P Sbjct: 19 PETYVYYALASYILVIGIIGTAENMLVMLVFIRSKSMWTPSNVFIFDLALSDLLI-CILGFPFLTISGFCKEWIFSEAGCSAYAFSMSVTGMHSIFILTILAVERLKVISRPLKMVKIVSKKRSFLLVLISWTFAIFVSIPPLLGWNRYVLEGLHISCSYDMFDGSWRSKSYIVFLIGI----FLVVLLIIIFCYLALF-------LKVQRQATSMRVMIKDSRDLLAERERQRENKLIWMGCNITLAFVLSWGPYALVTILSIFKVLNEKNSLIIVTFPSFFAKSFTIYNPIIYIFSYP 306
BLAST of opsin-like vs. Smed Unigenes AA
Match: SMU15030838 (SmedSxlregen_c54053_g1_i1|m.6668|m.37854) HSP 1 Score: 117.087 bits (292), Expect = 8.513e-28 Identity = 78/295 (26.44%), Postives = 158/295 (53.56%), Query Frame = 1 Query: 148 EVYHYLVGVYISFVGIAGVLGNLLVLYIFASAKSLRTPPNMFIMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXXNTMALISLDRYFVIAQPFQTMKSLTIKRAIIM-LVFVWLYSLIWSTPPFFGFGNYVPEGFQTSCTFDYLTQSKGNIIFNIGMYIGNFVIPVAIIIFCYYQIVKAVRLHELEMLKMAQKMNASHPASMKTGAKKADVQAAKISVIIVFLYLISWTPYAVIALMALTGRRDHLNPYTAELPVLFAKTSAMYNPFIYAINHPKFR 1029 +V++Y + ISF I GVL N +++ F ++L++P N+ IM++ I + A+ G P+ +SSF W + + C YGF G S+ M +I++DR+FVIA+P TM + K I + + +YSLI++ PP G+ Y + +TSC+ ++ ++ + I + + ++IP+ + ++CY+ I +R +++ + +++ +K + + +++ + + I+WTPYAVI + G + P ++AK++ + PF++ +++ +FR Sbjct: 10 KVFYYSKAIVISFFLIFGVLLNGTIMFTFFHNRALKSPTNLLIMAIIINNFLL-AIFGIPMDIVSSFYQYWIFSDVGCRFYGFAMFFTGLNSVAIMTVIAIDRFFVIAKP--TMAAHITKNVIYLSICGCLVYSLIFTIPPLIGWNEYKLDKSKTSCSVNFESRDPIFYSYTIVILVFCYIIPIIVNLYCYFYIYMTIR-------HISRNTKVTTDNAVEQN-RKIERKLLTVAIAVFVSFFIAWTPYAVICTWTVFGDPSVIPLIVYTTPSVWAKSTVVVYPFVFVLSNQQFR 293 HSP 2 Score: 117.087 bits (292), Expect = 8.513e-28 Identity = 78/295 (26.44%), Postives = 158/295 (53.56%), Query Frame = -1 Query: 1894 EVYHYLVGVYISFVGIAGVLGNLLVLYIFASAKSLRTPPNMFIMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXINTMALISLDRYFVIAQPFQTMKSLTIKRAIIM-LVFVWLYSLIWSTPPFFGFGNYVPEGFQTSCTFDYLTQSKGNIIFNIGMYIGNFVIPVAIIIFCYYQIVKAVRLHELEMLKMAQKMNASHPASMKTGAKKADVQAAKISVIIVFLYLISWTPYAVIALMALTGRRDHLNPYTAELPVLFAKTSAMYNPFIYAINHPKFR 2775 +V++Y + ISF I GVL N +++ F ++L++P N+ IM++ I + A+ G P+ +SSF W + + C YGF G S+ M +I++DR+FVIA+P TM + K I + + +YSLI++ PP G+ Y + +TSC+ ++ ++ + I + + ++IP+ + ++CY+ I +R +++ + +++ +K + + +++ + + I+WTPYAVI + G + P ++AK++ + PF++ +++ +FR Sbjct: 10 KVFYYSKAIVISFFLIFGVLLNGTIMFTFFHNRALKSPTNLLIMAIIINNFLL-AIFGIPMDIVSSFYQYWIFSDVGCRFYGFAMFFTGLNSVAIMTVIAIDRFFVIAKP--TMAAHITKNVIYLSICGCLVYSLIFTIPPLIGWNEYKLDKSKTSCSVNFESRDPIFYSYTIVILVFCYIIPIIVNLYCYFYIYMTIR-------HISRNTKVTTDNAVEQN-RKIERKLLTVAIAVFVSFFIAWTPYAVICTWTVFGDPSVIPLIVYTTPSVWAKSTVVVYPFVFVLSNQQFR 293
BLAST of opsin-like vs. Smed Unigenes AA
Match: SMU15010993 (SmedAsxldir_c46418_g1_i1|m.8227|m.22320) HSP 1 Score: 105.531 bits (262), Expect = 6.673e-24 Identity = 95/321 (29.60%), Postives = 160/321 (49.84%), Query Frame = 1 Query: 139 LVPEVYHYLVGVYISFVGIAGVLGNLLVLYIFASAKSLRTPPNMFIMSLAIGDLTFSAVNG-FPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXXNTMALISLDRYFVIAQPFQTMKSLTIKRAIIMLVFVWLYSLIWSTPPFFGFG----NYVPEGFQTSCTFDYLT--QSKGNIIFNIGMYIGNFVIPVAIIIFCYYQIVKAVR-----LHELEMLKMAQKMNASHPASMKTGAKKADVQAAK------ISVIIVFLYLISWTPYAVIALMA---LTGRRDHLNPYTAELP---VLFAKTSAMYNPFIYAINHPKFR 1029 L+P V Y+ + I G LG+ LV+Y+ +K+LRTP NMFI++LAI DL A + F ++ + SF+ W +G+ C++ G G +S ++ I+LDRY VI P T SL + AI +++ +W+ SLI ++P G N + T CT + K + ++I + +VIP++I+ Y +I + ++ LH+ + L+ + + SH + T +K D+Q + +S+ IVF ISW P +I ++ L + P + + +L TSA NP +Y + FR Sbjct: 58 LIPLVLSYIAMIVI------GTLGSSLVIYVVLRSKTLRTPRNMFILNLAITDLILCAFSQPFNIIRLLSFHKEWIFGEWVCKLVGLFTGTNVCVSTISITAIALDRYQVILCP--TRNSLQLIGAIKVMLGIWILSLIIASPLVLFSGVETVNMLKAN-HTRCTEHTVEIYMRKLKVGYSIATLVLLYVIPLSIVTITYMKIYRIIKQRMNNLHKKD-LESSNSLPNSHKMELLTDKQKYDIQRQRRANILLLSITIVF--AISWLPLNLINMIMDLYLMYNESTVGPMSLRIQSICLLMVLTSACTNPILYGWLNDNFR 366 HSP 2 Score: 105.531 bits (262), Expect = 6.673e-24 Identity = 95/321 (29.60%), Postives = 160/321 (49.84%), Query Frame = -1 Query: 1894 LVPEVYHYLVGVYISFVGIAGVLGNLLVLYIFASAKSLRTPPNMFIMSLAIGDLTFSAVNG-FPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXINTMALISLDRYFVIAQPFQTMKSLTIKRAIIMLVFVWLYSLIWSTPPFFGFG----NYVPEGFQTSCTFDYLT--QSKGNIIFNIGMYIGNFVIPVAIIIFCYYQIVKAVR-----LHELEMLKMAQKMNASHPASMKTGAKKADVQAAK------ISVIIVFLYLISWTPYAVIALMA---LTGRRDHLNPYTAELP---VLFAKTSAMYNPFIYAINHPKFR 2784 L+P V Y+ + I G LG+ LV+Y+ +K+LRTP NMFI++LAI DL A + F ++ + SF+ W +G+ C++ G G +S ++ I+LDRY VI P T SL + AI +++ +W+ SLI ++P G N + T CT + K + ++I + +VIP++I+ Y +I + ++ LH+ + L+ + + SH + T +K D+Q + +S+ IVF ISW P +I ++ L + P + + +L TSA NP +Y + FR Sbjct: 58 LIPLVLSYIAMIVI------GTLGSSLVIYVVLRSKTLRTPRNMFILNLAITDLILCAFSQPFNIIRLLSFHKEWIFGEWVCKLVGLFTGTNVCVSTISITAIALDRYQVILCP--TRNSLQLIGAIKVMLGIWILSLIIASPLVLFSGVETVNMLKAN-HTRCTEHTVEIYMRKLKVGYSIATLVLLYVIPLSIVTITYMKIYRIIKQRMNNLHKKD-LESSNSLPNSHKMELLTDKQKYDIQRQRRANILLLSITIVF--AISWLPLNLINMIMDLYLMYNESTVGPMSLRIQSICLLMVLTSACTNPILYGWLNDNFR 366
BLAST of opsin-like vs. RefSeq Human
Match: gi|15150803|ref|NP_150598.1| (melanopsin isoform 1 [Homo sapiens]) HSP 1 Score: 204.912 bits (520), Expect = 5.654e-56 Identity = 121/302 (40.07%), Postives = 182/302 (60.26%), Query Frame = 1 Query: 142 VPEVYHYLVGVYISFVGIAGVLGNLLVLYIFASAKSLRTPPNMFIMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXXNTMALISLDRYFVIAQPFQTMKSLTIKRAIIMLVFVWLYSLIWSTPPFFGFGNYVPEGFQTSCTFDYLTQSKGNIIFNIGMYIGNFVIPVAIIIFCYYQIVKAVRLHELEMLKMAQKMNASHPASMKTGAK---KADVQAAKISVIIVFLYLISWTPYAVIALMALTGRRDHLNPYTAELPVLFAKTSAMYNPFIYAINHPKFRIQL 1038 VP+ HY +G I VG+ G+LGNL V+Y F ++SLRTP NMFI++LA+ D S P+ SS +W +G+ CE Y F G LFG S+ T+ I+LDRY VI +P T + +RA +L+ VWLY+L WS PPFFG+ YVPEG TSC++DY++ + + + + F +P+ III+CY I +A+R E + Q A + +++ + AKI ++++ L+++SW PY+ +AL+A G L PY + +P + AK SA++NP IYAI HPK+R+ + Sbjct: 65 VPDHAHYTLGTVILLVGLTGMLGNLTVIYTFCRSRSLRTPANMFIINLAVSDFLMSFTQA-PVFFTSSLYKQWLFGETGCEFYAFCGALFGISSMITLTAIALDRYLVITRPLATFGVASKRRAAFVLLGVWLYALAWSLPPFFGWSAYVPEGLLTSCSWDYMSFTPAVRAYTMLLCCFVFFLPLLIIIYCYIFIFRAIR----ETGRALQTFGACKGNGESLWQRQRLQSECKMAKIMLLVILLFVLSWAPYSAVALVAFAGYAHVLTPYMSSVPAVIAKASAIHNPIIYAITHPKYRVAI 361 HSP 2 Score: 204.912 bits (520), Expect = 5.654e-56 Identity = 121/302 (40.07%), Postives = 182/302 (60.26%), Query Frame = -1 Query: 1885 VPEVYHYLVGVYISFVGIAGVLGNLLVLYIFASAKSLRTPPNMFIMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXINTMALISLDRYFVIAQPFQTMKSLTIKRAIIMLVFVWLYSLIWSTPPFFGFGNYVPEGFQTSCTFDYLTQSKGNIIFNIGMYIGNFVIPVAIIIFCYYQIVKAVRLHELEMLKMAQKMNASHPASMKTGAK---KADVQAAKISVIIVFLYLISWTPYAVIALMALTGRRDHLNPYTAELPVLFAKTSAMYNPFIYAINHPKFRIQL 2781 VP+ HY +G I VG+ G+LGNL V+Y F ++SLRTP NMFI++LA+ D S P+ SS +W +G+ CE Y F G LFG S+ T+ I+LDRY VI +P T + +RA +L+ VWLY+L WS PPFFG+ YVPEG TSC++DY++ + + + + F +P+ III+CY I +A+R E + Q A + +++ + AKI ++++ L+++SW PY+ +AL+A G L PY + +P + AK SA++NP IYAI HPK+R+ + Sbjct: 65 VPDHAHYTLGTVILLVGLTGMLGNLTVIYTFCRSRSLRTPANMFIINLAVSDFLMSFTQA-PVFFTSSLYKQWLFGETGCEFYAFCGALFGISSMITLTAIALDRYLVITRPLATFGVASKRRAAFVLLGVWLYALAWSLPPFFGWSAYVPEGLLTSCSWDYMSFTPAVRAYTMLLCCFVFFLPLLIIIYCYIFIFRAIR----ETGRALQTFGACKGNGESLWQRQRLQSECKMAKIMLLVILLFVLSWAPYSAVALVAFAGYAHVLTPYMSSVPAVIAKASAIHNPIIYAITHPKYRVAI 361
BLAST of opsin-like vs. RefSeq Human
Match: gi|71999143|ref|NP_001025186.1| (melanopsin isoform 2 [Homo sapiens]) HSP 1 Score: 197.593 bits (501), Expect = 2.281e-53 Identity = 122/313 (38.98%), Postives = 182/313 (58.15%), Query Frame = 1 Query: 142 VPEVYHYLVGVYISFVGIAGVLGNLLVLYIFASA-----------KSLRTPPNMFIMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXXNTMALISLDRYFVIAQPFQTMKSLTIKRAIIMLVFVWLYSLIWSTPPFFGFGNYVPEGFQTSCTFDYLTQSKGNIIFNIGMYIGNFVIPVAIIIFCYYQIVKAVRLHELEMLKMAQKMNASHPASMKTGAK---KADVQAAKISVIIVFLYLISWTPYAVIALMALTGRRDHLNPYTAELPVLFAKTSAMYNPFIYAINHPKFRIQL 1038 VP+ HY +G I VG+ G+LGNL V+Y F A +SLRTP NMFI++LA+ D S P+ SS +W +G+ CE Y F G LFG S+ T+ I+LDRY VI +P T + +RA +L+ VWLY+L WS PPFFG+ YVPEG TSC++DY++ + + + + F +P+ III+CY I +A+R E + Q A + +++ + AKI ++++ L+++SW PY+ +AL+A G L PY + +P + AK SA++NP IYAI HPK+R+ + Sbjct: 65 VPDHAHYTLGTVILLVGLTGMLGNLTVIYTFCRAVLRGVTVMMQSRSLRTPANMFIINLAVSDFLMSFTQA-PVFFTSSLYKQWLFGETGCEFYAFCGALFGISSMITLTAIALDRYLVITRPLATFGVASKRRAAFVLLGVWLYALAWSLPPFFGWSAYVPEGLLTSCSWDYMSFTPAVRAYTMLLCCFVFFLPLLIIIYCYIFIFRAIR----ETGRALQTFGACKGNGESLWQRQRLQSECKMAKIMLLVILLFVLSWAPYSAVALVAFAGYAHVLTPYMSSVPAVIAKASAIHNPIIYAITHPKYRVAI 372 HSP 2 Score: 197.593 bits (501), Expect = 2.281e-53 Identity = 122/313 (38.98%), Postives = 182/313 (58.15%), Query Frame = -1 Query: 1885 VPEVYHYLVGVYISFVGIAGVLGNLLVLYIFASA-----------KSLRTPPNMFIMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXINTMALISLDRYFVIAQPFQTMKSLTIKRAIIMLVFVWLYSLIWSTPPFFGFGNYVPEGFQTSCTFDYLTQSKGNIIFNIGMYIGNFVIPVAIIIFCYYQIVKAVRLHELEMLKMAQKMNASHPASMKTGAK---KADVQAAKISVIIVFLYLISWTPYAVIALMALTGRRDHLNPYTAELPVLFAKTSAMYNPFIYAINHPKFRIQL 2781 VP+ HY +G I VG+ G+LGNL V+Y F A +SLRTP NMFI++LA+ D S P+ SS +W +G+ CE Y F G LFG S+ T+ I+LDRY VI +P T + +RA +L+ VWLY+L WS PPFFG+ YVPEG TSC++DY++ + + + + F +P+ III+CY I +A+R E + Q A + +++ + AKI ++++ L+++SW PY+ +AL+A G L PY + +P + AK SA++NP IYAI HPK+R+ + Sbjct: 65 VPDHAHYTLGTVILLVGLTGMLGNLTVIYTFCRAVLRGVTVMMQSRSLRTPANMFIINLAVSDFLMSFTQA-PVFFTSSLYKQWLFGETGCEFYAFCGALFGISSMITLTAIALDRYLVITRPLATFGVASKRRAAFVLLGVWLYALAWSLPPFFGWSAYVPEGLLTSCSWDYMSFTPAVRAYTMLLCCFVFFLPLLIIIYCYIFIFRAIR----ETGRALQTFGACKGNGESLWQRQRLQSECKMAKIMLLVILLFVLSWAPYSAVALVAFAGYAHVLTPYMSSVPAVIAKASAIHNPIIYAITHPKYRVAI 372
BLAST of opsin-like vs. RefSeq Human
Match: gi|38678524|ref|NP_859528.1| (opsin-5 [Homo sapiens]) HSP 1 Score: 156.762 bits (395), Expect = 2.638e-40 Identity = 104/290 (35.86%), Postives = 155/290 (53.45%), Query Frame = 1 Query: 163 LVGVYISFVGIAGVLGNLLVLYIFASAKSLRTPPNMFIMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXXNTMALISLDRYFVIAQPFQTMKSLTIKRAIIMLVFVWLYSLIWSTPPFFGFGNYVPEGFQTSCTFDY-LTQ-SKGNIIFNIGMYIGNFVIPVAIIIFCYYQIVKAVRLHELEMLKMAQKMNASHPASMKTGAKKADVQAAKISVIIVFLYLISWTPYAVIALMALTGRRDHLNPYTAELPVLFAKTSAMYNPFIYAINHPKF 1026 + G Y++ +GI GN VLY+ + K P + ++LA+ DL S V G P IS F RW +G + C YG+ G FG S+ TM +SLDRY I L K A I L +W Y+ W+T P G G+YVPE F TSCT D+ L Q S G +F + + ++P A+I+F Y +I+ V+ E+ ++++SH MK K++++I +LI+W PYAV+++ + GR D + + +P L AK++AMYNP IY + KF Sbjct: 35 VAGFYLTIIGILSTFGNGYVLYMSSRRKKKLRPAEIMTINLAVCDLGISVV-GKPFTIISCFCHRWVFGWIGCRWYGWAGFFFGCGSLITMTAVSLDRYLKICY-LSYGVWLKRKHAYICLAAIWAYASFWTTMPLVGLGDYVPEPFGTSCTLDWWLAQASVGGQVFILNILFFCLLLPTAVIVFSYVKIIAKVKSSSKEVAHFDSRIHSSHVLEMKL---------TKVAMLICAGFLIAWIPYAVVSVWSAFGRPDSIPIQLSVVPTLLAKSAAMYNPIIYQVIDYKF 313 HSP 2 Score: 156.762 bits (395), Expect = 2.638e-40 Identity = 104/290 (35.86%), Postives = 155/290 (53.45%), Query Frame = -1 Query: 1897 LVGVYISFVGIAGVLGNLLVLYIFASAKSLRTPPNMFIMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXINTMALISLDRYFVIAQPFQTMKSLTIKRAIIMLVFVWLYSLIWSTPPFFGFGNYVPEGFQTSCTFDY-LTQ-SKGNIIFNIGMYIGNFVIPVAIIIFCYYQIVKAVRLHELEMLKMAQKMNASHPASMKTGAKKADVQAAKISVIIVFLYLISWTPYAVIALMALTGRRDHLNPYTAELPVLFAKTSAMYNPFIYAINHPKF 2760 + G Y++ +GI GN VLY+ + K P + ++LA+ DL S V G P IS F RW +G + C YG+ G FG S+ TM +SLDRY I L K A I L +W Y+ W+T P G G+YVPE F TSCT D+ L Q S G +F + + ++P A+I+F Y +I+ V+ E+ ++++SH MK K++++I +LI+W PYAV+++ + GR D + + +P L AK++AMYNP IY + KF Sbjct: 35 VAGFYLTIIGILSTFGNGYVLYMSSRRKKKLRPAEIMTINLAVCDLGISVV-GKPFTIISCFCHRWVFGWIGCRWYGWAGFFFGCGSLITMTAVSLDRYLKICY-LSYGVWLKRKHAYICLAAIWAYASFWTTMPLVGLGDYVPEPFGTSCTLDWWLAQASVGGQVFILNILFFCLLLPTAVIVFSYVKIIAKVKSSSKEVAHFDSRIHSSHVLEMKL---------TKVAMLICAGFLIAWIPYAVVSVWSAFGRPDSIPIQLSVVPTLLAKSAAMYNPIIYQVIDYKF 313
BLAST of opsin-like vs. RefSeq Human
Match: gi|767939386|ref|XP_011512652.1| (PREDICTED: opsin-5 isoform X3 [Homo sapiens]) HSP 1 Score: 150.599 bits (379), Expect = 3.070e-38 Identity = 115/369 (31.17%), Postives = 175/369 (47.43%), Query Frame = 1 Query: 178 ISFVGIAGVLGNLLVLYIFASAKSLRTPPNMFIMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXXNTMALISLDRYFVIAQPFQTMKSLTIKRAIIMLVFVWLYSLIWSTPPFFGFGNYVPEGFQTSCTFDY-LTQ-SKGNIIFNIGMYIGNFVIPVAIIIFCYYQIVKAVRLHELEMLKMAQKMNASHPASMKTGAKKADVQAAKISVIIVFLYLISWTPYAVIALMALTGRRDHLNPYTAELPVLFAKTSAMYNPFIYAINHPKFR-IQLEXXXXXXXXXXXXXXXERDTTSVASATKPSKYQSEKESSMSQLDSEDDKQNVETNKGQAASGHT--NEAYESEK*FVEN 1269 +S+ I GN VLY+ + K P + ++LA+ DL S V G P IS F RW +G + C YG+ G FG S+ TM +SLDRY I L K A I L +W Y+ W+T P G G+YVPE F TSCT D+ L Q S G +F + + ++P A+I+F Y +I+ V+ E+ ++++SH MK K++++I +LI+W PYAV+++ + GR D + + +P L AK++AMYNP IY + KF Q TT S+ ++ +K QL ++ + +++ H+ E E E V N Sbjct: 2 LSYGRILSTFGNGYVLYMSSRRKKKLRPAEIMTINLAVCDLGISVV-GKPFTIISCFCHRWVFGWIGCRWYGWAGFFFGCGSLITMTAVSLDRYLKICY-LSYGVWLKRKHAYICLAAIWAYASFWTTMPLVGLGDYVPEPFGTSCTLDWWLAQASVGGQVFILNILFFCLLLPTAVIVFSYVKIIAKVKSSSKEVAHFDSRIHSSHVLEMKL---------TKVAMLICAGFLIAWIPYAVVSVWSAFGRPDSIPIQLSVVPTLLAKSAAMYNPIIYQVIDYKFACCQTGGLKATKKKSLEGFRLHTVTTVRKSSAVLEIHEEDKGRLWHQLSCGENSEMTASSETLGTKAHSPLQETREGENEAVGN 359 HSP 2 Score: 150.599 bits (379), Expect = 3.070e-38 Identity = 115/369 (31.17%), Postives = 175/369 (47.43%), Query Frame = -1 Query: 1654 ISFVGIAGVLGNLLVLYIFASAKSLRTPPNMFIMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXINTMALISLDRYFVIAQPFQTMKSLTIKRAIIMLVFVWLYSLIWSTPPFFGFGNYVPEGFQTSCTFDY-LTQ-SKGNIIFNIGMYIGNFVIPVAIIIFCYYQIVKAVRLHELEMLKMAQKMNASHPASMKTGAKKADVQAAKISVIIVFLYLISWTPYAVIALMALTGRRDHLNPYTAELPVLFAKTSAMYNPFIYAINHPKFR-IQLEXXXXXXXXXXXXXXKERDTTSVASATKPSKYQSEKESSMSQLDSEDDKQNVETNKGQAASGHT--NEAYESEK*FVEN 2745 +S+ I GN VLY+ + K P + ++LA+ DL S V G P IS F RW +G + C YG+ G FG S+ TM +SLDRY I L K A I L +W Y+ W+T P G G+YVPE F TSCT D+ L Q S G +F + + ++P A+I+F Y +I+ V+ E+ ++++SH MK K++++I +LI+W PYAV+++ + GR D + + +P L AK++AMYNP IY + KF Q TT S+ ++ +K QL ++ + +++ H+ E E E V N Sbjct: 2 LSYGRILSTFGNGYVLYMSSRRKKKLRPAEIMTINLAVCDLGISVV-GKPFTIISCFCHRWVFGWIGCRWYGWAGFFFGCGSLITMTAVSLDRYLKICY-LSYGVWLKRKHAYICLAAIWAYASFWTTMPLVGLGDYVPEPFGTSCTLDWWLAQASVGGQVFILNILFFCLLLPTAVIVFSYVKIIAKVKSSSKEVAHFDSRIHSSHVLEMKL---------TKVAMLICAGFLIAWIPYAVVSVWSAFGRPDSIPIQLSVVPTLLAKSAAMYNPIIYQVIDYKFACCQTGGLKATKKKSLEGFRLHTVTTVRKSSAVLEIHEEDKGRLWHQLSCGENSEMTASSETLGTKAHSPLQETREGENEAVGN 359
BLAST of opsin-like vs. RefSeq Human
Match: gi|767939382|ref|XP_011512650.1| (PREDICTED: opsin-5 isoform X2 [Homo sapiens]) HSP 1 Score: 150.984 bits (380), Expect = 3.395e-38 Identity = 115/371 (31.00%), Postives = 175/371 (47.17%), Query Frame = 1 Query: 178 ISFVGIAGVLGNLLVLYIFASAKSLRTPPNMFIMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXXNTMALISLDRYFVIAQPFQTMKSLTIKRAIIMLVFVWLYSLIWSTPPFFGFGNYVPEGFQTSCTFDY-LTQ-SKGNIIFNIGMYIGNFVIPVAIIIFCYYQIVKAVRLHELEMLKMAQKMNASHPASMKTGAKKADVQAAKISVIIVFLYLISWTPYAVIALMALTGRRDHLNPYTAELPVLFAKTSAMYNPFIYAINHPKFR-IQLEXXXXXXXXXXXXXXXERDTTSVASATKPSKYQSEKESSMSQLDSEDDKQNVETNKGQAASGHT--NEAYESEK*FVENRN 1275 +S+ I GN VLY+ + K P + ++LA+ DL S V G P IS F RW +G + C YG+ G FG S+ TM +SLDRY I L K A I L +W Y+ W+T P G G+YVPE F TSCT D+ L Q S G +F + + ++P A+I+F Y +I+ V+ E+ ++++SH MK K++++I +LI+W PYAV+++ + GR D + + +P L AK++AMYNP IY + KF Q TT S+ ++ +K QL ++ + +++ H+ E E E V N Sbjct: 2 LSYGRILSTFGNGYVLYMSSRRKKKLRPAEIMTINLAVCDLGISVV-GKPFTIISCFCHRWVFGWIGCRWYGWAGFFFGCGSLITMTAVSLDRYLKICY-LSYGVWLKRKHAYICLAAIWAYASFWTTMPLVGLGDYVPEPFGTSCTLDWWLAQASVGGQVFILNILFFCLLLPTAVIVFSYVKIIAKVKSSSKEVAHFDSRIHSSHVLEMKL---------TKVAMLICAGFLIAWIPYAVVSVWSAFGRPDSIPIQLSVVPTLLAKSAAMYNPIIYQVIDYKFACCQTGGLKATKKKSLEGFRLHTVTTVRKSSAVLEIHEEDKGRLWHQLSCGENSEMTASSETLGTKAHSPLQETREGENEAVGGNN 361 HSP 2 Score: 150.984 bits (380), Expect = 3.395e-38 Identity = 115/371 (31.00%), Postives = 175/371 (47.17%), Query Frame = -1 Query: 1648 ISFVGIAGVLGNLLVLYIFASAKSLRTPPNMFIMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXINTMALISLDRYFVIAQPFQTMKSLTIKRAIIMLVFVWLYSLIWSTPPFFGFGNYVPEGFQTSCTFDY-LTQ-SKGNIIFNIGMYIGNFVIPVAIIIFCYYQIVKAVRLHELEMLKMAQKMNASHPASMKTGAKKADVQAAKISVIIVFLYLISWTPYAVIALMALTGRRDHLNPYTAELPVLFAKTSAMYNPFIYAINHPKFR-IQLEXXXXXXXXXXXXXXKERDTTSVASATKPSKYQSEKESSMSQLDSEDDKQNVETNKGQAASGHT--NEAYESEK*FVENRN 2745 +S+ I GN VLY+ + K P + ++LA+ DL S V G P IS F RW +G + C YG+ G FG S+ TM +SLDRY I L K A I L +W Y+ W+T P G G+YVPE F TSCT D+ L Q S G +F + + ++P A+I+F Y +I+ V+ E+ ++++SH MK K++++I +LI+W PYAV+++ + GR D + + +P L AK++AMYNP IY + KF Q TT S+ ++ +K QL ++ + +++ H+ E E E V N Sbjct: 2 LSYGRILSTFGNGYVLYMSSRRKKKLRPAEIMTINLAVCDLGISVV-GKPFTIISCFCHRWVFGWIGCRWYGWAGFFFGCGSLITMTAVSLDRYLKICY-LSYGVWLKRKHAYICLAAIWAYASFWTTMPLVGLGDYVPEPFGTSCTLDWWLAQASVGGQVFILNILFFCLLLPTAVIVFSYVKIIAKVKSSSKEVAHFDSRIHSSHVLEMKL---------TKVAMLICAGFLIAWIPYAVVSVWSAFGRPDSIPIQLSVVPTLLAKSAAMYNPIIYQVIDYKFACCQTGGLKATKKKSLEGFRLHTVTTVRKSSAVLEIHEEDKGRLWHQLSCGENSEMTASSETLGTKAHSPLQETREGENEAVGGNN 361
BLAST of opsin-like vs. RefSeq Drosophila melanogaster
Match: gi|17137098|ref|NP_477096.1| (rhodopsin 5, isoform A [Drosophila melanogaster]) HSP 1 Score: 202.986 bits (515), Expect = 8.809e-57 Identity = 116/320 (36.25%), Postives = 197/320 (61.56%), Query Frame = 1 Query: 94 SDFESIVHPYWREFELVPEVYHYLVGVYISFV--GIAGVLGNLLVLYIFASAKSLRTPPNMFIMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXXNTMALISLDRYFVIAQPFQTMKSLTIKRAIIMLVFVWLYSLIWSTPPFFG-FGNYVPEGFQTSCTFDYLTQSKGNIIFNIGMYIGNFVIPVAIIIFCYYQIVKAVRLHELEMLKMAQKMNA-SHPASMKTGAKKADVQAAKISVIIVFLYLISWTPYAVIALMALTGRRDHLNPYTAELPVLFAKTSAMYNPFIYAINHPKFRIQLE 1041 ++++ +VH +WR F P YH G YI+F+ ++ + GN LV++IF+++KSLRTP N+ I++LAI DL F N P I++ G L C+IY GG+ G + T A I+ DRY I+ P L+ + +++++F WL++ +S P F +G Y PEGF T+C+FDYLT + N +F +++ ++VIP+ +I+ YY++ VR+HE + + A+KMN S A+ +++ AK ++II L++++WTPY+V+AL+ G + + P+ + LP L K+ + +P++YA +HPK+R++LE Sbjct: 31 AEYQHMVHAHWRGFREAPIYYH--AGFYIAFIVLMLSSIFGNGLVIWIFSTSKSLRTPSNLLILNLAIFDL-FMCTN-MPHYLINATVGYIVGGDLGCDIYALNGGISGMGASITNAFIAFDRYKTISNPID--GRLSYGQIVLLILFTWLWATPFSVLPLFQIWGRYQPEGFLTTCSFDYLTNTDENRLFVRTIFVWSYVIPMTMILVSYYKLFTHVRVHEKMLAEQAKKMNVKSLSANANADNMSVELRIAKAALIIYMLFILAWTPYSVVALIGCFGEQQLITPFVSMLPCLACKSVSCLDPWVYATSHPKYRLELE 344 HSP 2 Score: 202.986 bits (515), Expect = 8.809e-57 Identity = 116/320 (36.25%), Postives = 197/320 (61.56%), Query Frame = -1 Query: 1882 SDFESIVHPYWREFELVPEVYHYLVGVYISFV--GIAGVLGNLLVLYIFASAKSLRTPPNMFIMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXINTMALISLDRYFVIAQPFQTMKSLTIKRAIIMLVFVWLYSLIWSTPPFFG-FGNYVPEGFQTSCTFDYLTQSKGNIIFNIGMYIGNFVIPVAIIIFCYYQIVKAVRLHELEMLKMAQKMNA-SHPASMKTGAKKADVQAAKISVIIVFLYLISWTPYAVIALMALTGRRDHLNPYTAELPVLFAKTSAMYNPFIYAINHPKFRIQLE 2829 ++++ +VH +WR F P YH G YI+F+ ++ + GN LV++IF+++KSLRTP N+ I++LAI DL F N P I++ G L C+IY GG+ G + T A I+ DRY I+ P L+ + +++++F WL++ +S P F +G Y PEGF T+C+FDYLT + N +F +++ ++VIP+ +I+ YY++ VR+HE + + A+KMN S A+ +++ AK ++II L++++WTPY+V+AL+ G + + P+ + LP L K+ + +P++YA +HPK+R++LE Sbjct: 31 AEYQHMVHAHWRGFREAPIYYH--AGFYIAFIVLMLSSIFGNGLVIWIFSTSKSLRTPSNLLILNLAIFDL-FMCTN-MPHYLINATVGYIVGGDLGCDIYALNGGISGMGASITNAFIAFDRYKTISNPID--GRLSYGQIVLLILFTWLWATPFSVLPLFQIWGRYQPEGFLTTCSFDYLTNTDENRLFVRTIFVWSYVIPMTMILVSYYKLFTHVRVHEKMLAEQAKKMNVKSLSANANADNMSVELRIAKAALIIYMLFILAWTPYSVVALIGCFGEQQLITPFVSMLPCLACKSVSCLDPWVYATSHPKYRLELE 344
BLAST of opsin-like vs. RefSeq Drosophila melanogaster
Match: gi|665407712|ref|NP_001285859.1| (rhodopsin 5, isoform B [Drosophila melanogaster]) HSP 1 Score: 202.986 bits (515), Expect = 8.809e-57 Identity = 116/320 (36.25%), Postives = 197/320 (61.56%), Query Frame = 1 Query: 94 SDFESIVHPYWREFELVPEVYHYLVGVYISFV--GIAGVLGNLLVLYIFASAKSLRTPPNMFIMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXXNTMALISLDRYFVIAQPFQTMKSLTIKRAIIMLVFVWLYSLIWSTPPFFG-FGNYVPEGFQTSCTFDYLTQSKGNIIFNIGMYIGNFVIPVAIIIFCYYQIVKAVRLHELEMLKMAQKMNA-SHPASMKTGAKKADVQAAKISVIIVFLYLISWTPYAVIALMALTGRRDHLNPYTAELPVLFAKTSAMYNPFIYAINHPKFRIQLE 1041 ++++ +VH +WR F P YH G YI+F+ ++ + GN LV++IF+++KSLRTP N+ I++LAI DL F N P I++ G L C+IY GG+ G + T A I+ DRY I+ P L+ + +++++F WL++ +S P F +G Y PEGF T+C+FDYLT + N +F +++ ++VIP+ +I+ YY++ VR+HE + + A+KMN S A+ +++ AK ++II L++++WTPY+V+AL+ G + + P+ + LP L K+ + +P++YA +HPK+R++LE Sbjct: 31 AEYQHMVHAHWRGFREAPIYYH--AGFYIAFIVLMLSSIFGNGLVIWIFSTSKSLRTPSNLLILNLAIFDL-FMCTN-MPHYLINATVGYIVGGDLGCDIYALNGGISGMGASITNAFIAFDRYKTISNPID--GRLSYGQIVLLILFTWLWATPFSVLPLFQIWGRYQPEGFLTTCSFDYLTNTDENRLFVRTIFVWSYVIPMTMILVSYYKLFTHVRVHEKMLAEQAKKMNVKSLSANANADNMSVELRIAKAALIIYMLFILAWTPYSVVALIGCFGEQQLITPFVSMLPCLACKSVSCLDPWVYATSHPKYRLELE 344 HSP 2 Score: 202.986 bits (515), Expect = 8.809e-57 Identity = 116/320 (36.25%), Postives = 197/320 (61.56%), Query Frame = -1 Query: 1882 SDFESIVHPYWREFELVPEVYHYLVGVYISFV--GIAGVLGNLLVLYIFASAKSLRTPPNMFIMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXINTMALISLDRYFVIAQPFQTMKSLTIKRAIIMLVFVWLYSLIWSTPPFFG-FGNYVPEGFQTSCTFDYLTQSKGNIIFNIGMYIGNFVIPVAIIIFCYYQIVKAVRLHELEMLKMAQKMNA-SHPASMKTGAKKADVQAAKISVIIVFLYLISWTPYAVIALMALTGRRDHLNPYTAELPVLFAKTSAMYNPFIYAINHPKFRIQLE 2829 ++++ +VH +WR F P YH G YI+F+ ++ + GN LV++IF+++KSLRTP N+ I++LAI DL F N P I++ G L C+IY GG+ G + T A I+ DRY I+ P L+ + +++++F WL++ +S P F +G Y PEGF T+C+FDYLT + N +F +++ ++VIP+ +I+ YY++ VR+HE + + A+KMN S A+ +++ AK ++II L++++WTPY+V+AL+ G + + P+ + LP L K+ + +P++YA +HPK+R++LE Sbjct: 31 AEYQHMVHAHWRGFREAPIYYH--AGFYIAFIVLMLSSIFGNGLVIWIFSTSKSLRTPSNLLILNLAIFDL-FMCTN-MPHYLINATVGYIVGGDLGCDIYALNGGISGMGASITNAFIAFDRYKTISNPID--GRLSYGQIVLLILFTWLWATPFSVLPLFQIWGRYQPEGFLTTCSFDYLTNTDENRLFVRTIFVWSYVIPMTMILVSYYKLFTHVRVHEKMLAEQAKKMNVKSLSANANADNMSVELRIAKAALIIYMLFILAWTPYSVVALIGCFGEQQLITPFVSMLPCLACKSVSCLDPWVYATSHPKYRLELE 344
BLAST of opsin-like vs. RefSeq Drosophila melanogaster
Match: gi|17738051|ref|NP_524407.1| (neither inactivation nor afterpotential E [Drosophila melanogaster]) HSP 1 Score: 197.978 bits (502), Expect = 4.509e-55 Identity = 122/342 (35.67%), Postives = 192/342 (56.14%), Query Frame = 1 Query: 97 DFESIVHPYWREFELVPEVYHYLVGVYISFVGIAGVLGNLLVLYIFASAKSLRTPPNMFIMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXXNTMALISLDRYFVIAQPFQTMKSLTIKRAIIMLVFVWLYSLIWSTPPFFGFGNYVPEGFQTSCTFDYLTQSKGNIIFNIGMYIGNFVIPVAIIIFCYYQIVKAVRLHELEMLKMAQKMNASHPASMKTGAKKADVQAAKISVIIVFLYLISWTPYAVIALMALTGRRDHLNPYTAELPVLFAKTSAMYNPFIYAINHPKFRIQLEXXXXXXXXXXXXXXXERDTTSVASATK 1122 D ++ PYW +F + ++ ++ Y+ +G+ GN +V+YIFA+ KSLRTP N+ +++LAI D N P++ I+ + W G + C+IY +G FG SI +M +ISLDRY VI + + +TI A+ + ++W S IW P FG+ YVPEG TSC DYL + + I I + IP+ +I + Y+ I+ AV HE M + A+KMN S + K A+ + AK++++ + L+ ++WTPY VI M L + + L P FAK++A YNP +Y I+HPK+R+ L++K PC + K D S A+A++ Sbjct: 30 DMAHLISPYWNQFPAMDPIWAKILTAYMIMIGMISWCGNGVVIYIFATTKSLRTPANLLVINLAISDFGIMITNT-PMMGINLYFETWVLGPMMCDIYAGLGSAFGCSSIWSMCMISLDRYQVIVKGMAG-RPMTIPLALGKIAYIWFMSSIWCLAPAFGWSRYVPEGNLTSCGIDYLERDWNPRSYLIFYSIFVYYIPLFLICYSYWFIIAAVSAHEKAMREQAKKMNVKSLRSSEDAEKSAEGKLAKVALVTITLWFMAWTPYLVINCMGLF-KFEGLTPLNTIWGACFAKSAACYNPIVYGISHPKYRLALKEKCPCCVFGKVDDGKSSDAQSQATASE 368 HSP 2 Score: 197.978 bits (502), Expect = 4.509e-55 Identity = 122/342 (35.67%), Postives = 192/342 (56.14%), Query Frame = -1 Query: 1801 DFESIVHPYWREFELVPEVYHYLVGVYISFVGIAGVLGNLLVLYIFASAKSLRTPPNMFIMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXINTMALISLDRYFVIAQPFQTMKSLTIKRAIIMLVFVWLYSLIWSTPPFFGFGNYVPEGFQTSCTFDYLTQSKGNIIFNIGMYIGNFVIPVAIIIFCYYQIVKAVRLHELEMLKMAQKMNASHPASMKTGAKKADVQAAKISVIIVFLYLISWTPYAVIALMALTGRRDHLNPYTAELPVLFAKTSAMYNPFIYAINHPKFRIQLEXXXXXXXXXXXXXXKERDTTSVASATK 2826 D ++ PYW +F + ++ ++ Y+ +G+ GN +V+YIFA+ KSLRTP N+ +++LAI D N P++ I+ + W G + C+IY +G FG SI +M +ISLDRY VI + + +TI A+ + ++W S IW P FG+ YVPEG TSC DYL + + I I + IP+ +I + Y+ I+ AV HE M + A+KMN S + K A+ + AK++++ + L+ ++WTPY VI M L + + L P FAK++A YNP +Y I+HPK+R+ L++K PC + K D S A+A++ Sbjct: 30 DMAHLISPYWNQFPAMDPIWAKILTAYMIMIGMISWCGNGVVIYIFATTKSLRTPANLLVINLAISDFGIMITNT-PMMGINLYFETWVLGPMMCDIYAGLGSAFGCSSIWSMCMISLDRYQVIVKGMAG-RPMTIPLALGKIAYIWFMSSIWCLAPAFGWSRYVPEGNLTSCGIDYLERDWNPRSYLIFYSIFVYYIPLFLICYSYWFIIAAVSAHEKAMREQAKKMNVKSLRSSEDAEKSAEGKLAKVALVTITLWFMAWTPYLVINCMGLF-KFEGLTPLNTIWGACFAKSAACYNPIVYGISHPKYRLALKEKCPCCVFGKVDDGKSSDAQSQATASE 368
BLAST of opsin-like vs. RefSeq Drosophila melanogaster
Match: gi|17136434|ref|NP_476701.1| (rhodopsin 4 [Drosophila melanogaster]) HSP 1 Score: 197.593 bits (501), Expect = 6.717e-55 Identity = 114/327 (34.86%), Postives = 186/327 (56.88%), Query Frame = 1 Query: 67 VSKVPWHWDSDFESIVHPYWREFELVPEVYHYLVGVYISFVGIAGVLGNLLVLYIFASAKSLRTPPNMFIMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXXNTMALISLDRYFVIAQPFQTMKSLTIKRAIIMLVFVWLYSLIWSTPPFFGF-GNYVPEGFQTSCTFDYLTQSKGNIIFNIGMYIGNFVIPVAIIIFCYYQIVKAVRLHELEMLKMAQKMNA-SHPASMKTGAKKADVQAAKISVIIVFLYLISWTPYAVIALMALTGRRDHLNPYTAELPVLFAKTSAMYNPFIYAINHPKFRIQLE 1041 + +P HW + E P HY++GV+ F+ A +GN +V++IF+++KSLRTP NMF+++LA+ DL P+ +SF+ +A G C+I+ IG G + T A I DRY VI +P +++T +A+IM + +WLY W P F +VPEG+ TSC+FDYL+ + +F ++ +FV P +I++ Y QIV V HE + + A+KMN S +++ + A+++ AK ++ I FL+ +SWTPY V++L+ G + L P +P K A +PF+YAI+HP++R++L+ Sbjct: 36 IQYIPEHWLTQLEP------------PASMHYMLGVFYIFLFCASTVGNGMVIWIFSTSKSLRTPSNMFVLNLAVFDLIMCLKA--PIFIYNSFHRGFALGNTWCQIFASIGSYSGIGAGMTNAAIGYDRYNVITKPMN--RNMTFTKAVIMNIIIWLYCTPWVVLPLTQFWDRFVPEGYLTSCSFDYLSDNFDTRLFVGTIFFFSFVCPTLMILYYYSQIVGHVFSHEKALREQAKKMNVESLRSNVDKSKETAEIRIAKAAITICFLFFVSWTPYGVMSLIGAFGDKSLLTPGATMIPACTCKLVACIDPFVYAISHPRYRLELQ 346 HSP 2 Score: 197.593 bits (501), Expect = 6.717e-55 Identity = 114/327 (34.86%), Postives = 186/327 (56.88%), Query Frame = -1 Query: 1882 VSKVPWHWDSDFESIVHPYWREFELVPEVYHYLVGVYISFVGIAGVLGNLLVLYIFASAKSLRTPPNMFIMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXINTMALISLDRYFVIAQPFQTMKSLTIKRAIIMLVFVWLYSLIWSTPPFFGF-GNYVPEGFQTSCTFDYLTQSKGNIIFNIGMYIGNFVIPVAIIIFCYYQIVKAVRLHELEMLKMAQKMNA-SHPASMKTGAKKADVQAAKISVIIVFLYLISWTPYAVIALMALTGRRDHLNPYTAELPVLFAKTSAMYNPFIYAINHPKFRIQLE 2856 + +P HW + E P HY++GV+ F+ A +GN +V++IF+++KSLRTP NMF+++LA+ DL P+ +SF+ +A G C+I+ IG G + T A I DRY VI +P +++T +A+IM + +WLY W P F +VPEG+ TSC+FDYL+ + +F ++ +FV P +I++ Y QIV V HE + + A+KMN S +++ + A+++ AK ++ I FL+ +SWTPY V++L+ G + L P +P K A +PF+YAI+HP++R++L+ Sbjct: 36 IQYIPEHWLTQLEP------------PASMHYMLGVFYIFLFCASTVGNGMVIWIFSTSKSLRTPSNMFVLNLAVFDLIMCLKA--PIFIYNSFHRGFALGNTWCQIFASIGSYSGIGAGMTNAAIGYDRYNVITKPMN--RNMTFTKAVIMNIIIWLYCTPWVVLPLTQFWDRFVPEGYLTSCSFDYLSDNFDTRLFVGTIFFFSFVCPTLMILYYYSQIVGHVFSHEKALREQAKKMNVESLRSNVDKSKETAEIRIAKAAITICFLFFVSWTPYGVMSLIGAFGDKSLLTPGATMIPACTCKLVACIDPFVYAISHPRYRLELQ 346
BLAST of opsin-like vs. RefSeq Drosophila melanogaster
Match: gi|17738059|ref|NP_524411.1| (rhodopsin 3 [Drosophila melanogaster]) HSP 1 Score: 194.126 bits (492), Expect = 1.438e-53 Identity = 114/322 (35.40%), Postives = 187/322 (58.07%), Query Frame = 1 Query: 88 WDSDFESIVH--PYWREFELVPEVYHYLVGVYISFVGIAGVLGNLLVLYIFASAKSLRTPPNMFIMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXXNTMALISLDRYFVIAQPFQTMKSLTIKRAIIMLVFVWLYSLIWSTPPFF-GFGNYVPEGFQTSCTFDYLTQSKGNIIFNIGMYIGNFVIPVAIIIFCYYQIVKAVRLHELEMLKMAQKMNA-SHPASMKTGAKKADVQAAKISVIIVFLYLISWTPYAVIALMALTGRRDHLNPYTAELPVLFAKTSAMYNPFIYAINHPKFRIQLE 1041 W+ E + H +W + PE +YL+G F + +LGN LV+++F++AKSLRTP N+ +++LA D F + P+ +SF+ +A G L C+I+G IG G + T A I+ DR+ VI +P + +T +AI M++F+++Y+ W + +G +VPEG+ TSCTFDYLT + +F ++ +FV P +I + Y QIV V HE + A+KMN S +++ + A+++ AK ++ I FL+ SWTPY V++L+ G + L P +P K A +PF+YAI+HP++R++L+ Sbjct: 33 WNVPPEELRHIPEHWLTYPEPPESMNYLLGTLYIFFTLMSMLGNGLVIWVFSAAKSLRTPSNILVINLAFCD--FMMMVKTPIFIYNSFHQGYALGHLGCQIFGIIGSYTGIAAGATNAFIAYDRFNVITRPME--GKMTHGKAIAMIIFIYMYATPWVVACYTETWGRFVPEGYLTSCTFDYLTDNFDTRLFVACIFFFSFVCPTTMITYYYSQIVGHVFSHEKALRDQAKKMNVESLRSNVDKNKETAEIRIAKAAITICFLFFCSWTPYGVMSLIGAFGDKTLLTPGATMIPACACKMVACIDPFVYAISHPRYRMELQ 350 HSP 2 Score: 194.126 bits (492), Expect = 1.438e-53 Identity = 114/322 (35.40%), Postives = 187/322 (58.07%), Query Frame = -1 Query: 1882 WDSDFESIVH--PYWREFELVPEVYHYLVGVYISFVGIAGVLGNLLVLYIFASAKSLRTPPNMFIMSLAIGDLTFSAVNGFPLLTISSFNTRWAWGKLTCEXXXXXXXXXXXXXINTMALISLDRYFVIAQPFQTMKSLTIKRAIIMLVFVWLYSLIWSTPPFF-GFGNYVPEGFQTSCTFDYLTQSKGNIIFNIGMYIGNFVIPVAIIIFCYYQIVKAVRLHELEMLKMAQKMNA-SHPASMKTGAKKADVQAAKISVIIVFLYLISWTPYAVIALMALTGRRDHLNPYTAELPVLFAKTSAMYNPFIYAINHPKFRIQLE 2835 W+ E + H +W + PE +YL+G F + +LGN LV+++F++AKSLRTP N+ +++LA D F + P+ +SF+ +A G L C+I+G IG G + T A I+ DR+ VI +P + +T +AI M++F+++Y+ W + +G +VPEG+ TSCTFDYLT + +F ++ +FV P +I + Y QIV V HE + A+KMN S +++ + A+++ AK ++ I FL+ SWTPY V++L+ G + L P +P K A +PF+YAI+HP++R++L+ Sbjct: 33 WNVPPEELRHIPEHWLTYPEPPESMNYLLGTLYIFFTLMSMLGNGLVIWVFSAAKSLRTPSNILVINLAFCD--FMMMVKTPIFIYNSFHQGYALGHLGCQIFGIIGSYTGIAAGATNAFIAYDRFNVITRPME--GKMTHGKAIAMIIFIYMYATPWVVACYTETWGRFVPEGYLTSCTFDYLTDNFDTRLFVACIFFFSFVCPTTMITYYYSQIVGHVFSHEKALRDQAKKMNVESLRSNVDKNKETAEIRIAKAAITICFLFFCSWTPYGVMSLIGAFGDKTLLTPGATMIPACACKMVACIDPFVYAISHPRYRMELQ 350 The following BLAST results are available for this feature:
BLAST of opsin-like vs. uniprot
Analysis Date: 2016-03-07 (Dugesia dorotocephala BLASTX Swissprot Uniprot) Total hits: 5
BLAST of opsin-like vs. Smed Unigenes AA
Analysis Date: 2016-03-08 (Dugesia dorotocephala BLASTX Schmidtea mediterranea) Total hits: 5
BLAST of opsin-like vs. RefSeq Human
Analysis Date: 2016-03-08 (Dugesia dorotocephala BLASTX Human) Total hits: 5
BLAST of opsin-like vs. RefSeq Drosophila melanogaster
Analysis Date: 2016-03-08 (Dugesia dorotocephala BLASTX Drosophila melanogaster) Total hits: 5
Sequences
The following sequences are available for this feature:
mRNA sequence >Ddo_008381 ID=Ddo_008381|Name=opsin-like|organism=Dugesia dorotocephala|type=mRNA|length=2922bp Design Primers for opsin-like back to top protein sequence >Ddo_008381-protein ID=Ddo_008381-protein|Name=opsin-like|organism=Dugesia dorotocephala|type=polypeptide|length=419bpback to top coding sequence >Ddo_008381.1.1257 ID=Ddo_008381.1.1257|Name=Ddo_008381.1.1257|organism=Dugesia dorotocephala|type=CDS|length=1257bpback to top Gene Groups
opsin-like is similar in sequence to the genes of this group: GG7488
Gene Group Protein Sequences >SMU15026624 |